Page generated on Fri Oct 15 12:01:05 2010

dme-bantam




dme-bantam

View dme-bantam on miRBase
miRNALengthPerfect(sense)Perfect(antisense)5' moR5'armLoop3'arm3' moROtherLoop SizeMatureStar
dme-bantam1303535323416440187513495092534421434950925401875


ACGAAAAGCGTTTGTAACTCCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTTTTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACATTCCACATTCCGA
...........................(((((...((((.((((((((((..((((((.(((((.......)).))).))))))..)))))))))).)))))))))........................-25.50
(((((.....)))))......((((..(((((...((((.((((((((((..((((((.(((((.......)).))).))))))..)))))))))).))))))))).((((.....))))..))))....-27.70
Sense strand
                                                                                                                                  SizeBlastTotalSRR032095 AGO1 IP dcr2 knockdown V067 S2-NPV018 Kc167 cellV076 ML-DmBG3-C2V024 kc167 cellV020 S2R+ cellV025 S2R+ cellV082 embryo 14-24hrGSM280088 S2cell (AGO1IP) V098 dcr-2[L811fsX] ovaryV097 CS ovaryV026 1182-4H cellSRR029028 untreated (mock) V008 S2-DRSCSRR029031 loqs-ORF knockdown V088 r2d2[1] ovary total RNA  V033 CMEW1 Cl.8+ cellV090 CS  male total RNA  V019 GM2 cellV075 ML-DmBG1-C1V028 CMEW1 Cl.8+ cellV064 ago2[414], ovary, AGO1IPV089 ago2[414] ovary total RNA  V011 Sg4V063 CS,ovary,AGO1IPSRR029032 r2d2 knockdown V083 male, one dayV065 dcr-2[L811fsX], ovary, AGO1IPSRR029030 dcr-2 knockdown V081 embryo 2-6hrSRR029033 lacZ knockdown SRR032094 ago2 knockdown V001 IR-SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1 V009 CMEL1V066 r2d2[1], ovary, AGO1IPV084 female, one daySRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1 SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1 SRR029029 dcr-1 knockdown V021 ML-DmD21 cellSRR014275 Ovary_rep1 LK_P SRR032093 ago1 knockdown GSM379065 Zuc Heterozygote SRR031703 Total small RNAs from r2d2 homozygous flies SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1 V002 IR+SRR031696_2152 GSM379064 Vasa Mutant V010 MLDmD20c5SRR014277 Ovary_rep1 NA_P SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb GSM379063 Vasa Heterozygote SRR014280 Ovary_rep1 w1118_P SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb GSM379057 Krimp Mutant SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb SRR014273 Ovary_rep1_Har_P SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1 SRR031701 Total small RNAs from r2d2 heterozygous flies SRR014282 Ovary_rep1 wK_P GSM379056 Krimp Heterozygote SRR029633 total small RNAs from hen1 homozygous flies S32 s2+48 #2GSM379061 Squ Heterozygote SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb GSM424741 S2 pKF63 transiently transfected SRR031697 Total small RNAs from dcr-2 heterozygous flies GSM379052 Aub Heterozygote GSM379066 Zuc Mutant SRR031692 Total small RNAs from Oregon R S30 s2-48 #2GSM379060 SpnE Heterozygote GSM379062 Squ Mutant SRR031699 Total small RNAs from dcr-2 homozygous flies SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb GSM379051 Armi Mutant S31 s2+48 #1SRR032096 AGO2 IP dcr2 knockdownGSM379054 Flam Heterozygote GSM379053 Aub Mutant S33 KC-48 #2GSM379050 Armi Heterozygote GSM379058 S15 S2 -48 #1SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies GSM379067 SpnE Mutant OSS6 Drosophila OSS cell small RNA libraries, rep2 SRR001345 ago2 non-beta-eliminated OSS2 Drosophila OSS cell small RNA libraries, rep1 GSM280082 WT ovaries (18-29nt) OSS8 Drosophila OSS cell small RNA libraries, rep4 GSM280084 loqs-/- ovaries (18-29nt) GSM467729 WT OSS7 Drosophila OSS cell small RNA libraries, rep3 GSM467730 r2d2 GSM379059 SRR032092 mock oxidized SRR001349 heterozygous dcr-2_untreated GSM379055 Flam Mutant S16 KC -48 #1GSM280083 dcr-2-/- ovaries (18-29nt) SRR001338 IR non-beta-eliminated SRR001664 homozygous dcr-2_untreated SRR001347 ago2 untreated SRR001341 WT_males non-beta-eliminated SRR001339 WT_females non-beta-eliminated S35 KC+48 #2GSM280087 S2cell (AGO2IP) S29 male head #1SRR001343 dcr-2 non-beta-eliminated GSM467731 loq SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies SRR010954 Aub trans-heterozygotes, oxidized GSM424740 S2 pKF63 stably transfected SRR001344 dcr-2 beta-eliminated S8 S2-48,+48, KC-48, +48 mixS34 KC+48 #1GSM343287 Drosophila Toll 10b mutant embryos S24 male body #2SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies SRR010953 Aub heterozygotes, oxidized SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies S12 6-10h #1 (10)S9 0-1h #3 (7)S22 female head #1GSM424739 S2 parental SRR010959 Ago3 IP in heterozygotes S23 female body #2SRR031693_4 S28 0-2d pupaeSRR010955 Aub IP in Ago3 heterozygotes S10 2-6h #1 (8)S13 6-10h #2 (11)S19 2-4day pupae #1SRR001348 ago2 oxidized SRR023400 total RNA extracted from P19 cells S14 0-1hr #1 (A)GSM239052 S2 cells, non beta-eliminated SRR023399 RNA bound by P19 protein S2 female headS7 12-24hr embryoSRR010956 Piwi IP in Ago3 heterozygotes GSM180337 tissue culture cells (S2 only) S27 0-1d Pupae (w)SRR001337 WT_females beta-eliminated SRR010958 Piwi IP in Ago3 trans-heterozygotes S21 disk #2S5 imaginal discSRR023197 RNA Library from S2 control cells S3 male bodyS4 female bodyGSM280085 WT testes (18-24nt) S11 2-6h #2 (9)S25 1st instar #1SRR010960 wt, oxidized SRR001346 ago2 beta-eliminated S17 3rd inster #1SRR010957 Aub IP in Ago3 trans-heterozygotes SRR023407 RNA bound by NLS-P19 protein S1 male headGSM239051 S2 cells, beta-eliminated S18 3rd inster #2GSM180333 late embryo (12-24) S26 1st instar #2GSM239041 fly heads, non beta-eliminated GSM180328 adult heads (female heads, male heads) GSM239050 fly heads, beta-eliminated S20 2-4day pupae#2SRR001340 IR beta-eliminated GSM180332 mid embryo (6-10) GSM180329 adult bodies (female bodies, male bodies) SRR010952 Ago3 trans-heterozygotes, oxidized GSM180335 imaginal discs GSM180331 early embryo (2-6) SRR023402 total RNA extracted from NLS-P19 cells SRR001342 WT_males beta-eliminated GSM180334 larvae: 1st instar and 3rd instars GSM180330 very early embryo (0-1) GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day GSM246084 D. melanogaster adult male heads 454 GSM280086 WT ovaries (AGO2IP) SRR010951 Ago3 heterozygotes, oxidized GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006) GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0 GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries
...AAAAGCGTTTGTAACTCCAATG.........................................................................................................2211000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CGTTTGTAACTCCAATGATTTGACT.................................................................................................2511000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................CAATGATTTGACTACGAAA...........................................................................................1911000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GAAACCGGTTTTCGATTTGGTTTGACT....................................................................2712000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
...................................GAAACCGGTTTTCGATTTGGTTTGA......................................................................2515000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................AAACCGGTTTTCGATTTGGTTTGACT....................................................................2611000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................AACCGGTTTTCGATTTGGTTTGACT....................................................................2516000000000000000000000000000000000000000000000000000000000000000000000000000001000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................ACCGGTTTTCGATTTGGTTTGAC.....................................................................231200000000000000000100000000000000000000000000000000001000000000001200000003000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
......................................ACCGGTTTTCGATTTGGTTT........................................................................2011000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................ACCGGTTTTCGATTTGGTTTGACT....................................................................241530000221300000000000000000000030010000000002000001000000000000007100000050000050001000100000000000000010000000000000001101100001000000010000000001000000000000000001000000000000000000000000000
......................................ACCGGTTTTCGATTTGGTT.........................................................................1912000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000
......................................ACCGGTTTTCGATTTGGTTTGA......................................................................2216000000000000000000000000000000000020000000000000000000000000000100000000000001000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CCGGTTTTCGATTTGGTTTGACTGTTTTTCA............................................................3114000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CCGGTTTTCGATTTGGTTTGACTGTTTT...............................................................28110000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000106000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CCGGTTTTCGATTTGGTTT........................................................................191653131451124072394500136514063150300010007004412001004012000210200000000040013411000000350010055003004005030505330000303000009200160001412611001000320000010001000000010001000001100000100000000000000000000000
.......................................CCGGTTTTCGATTTGGTTTGAC.....................................................................221307021489824356847178251528357122360381370895824136349666200201354704361888724412743248218143111106896016629418499499133621186112222134663426154284161116787412116873389334108913102597414132432807803733647169598597389122354220016286582651923152581805511114448729851151518222325161201085116111125101631500156318194236111344721612622829365032414121024182471202061601117262719317117101844479124604373000011006000000
.......................................CCGGTTTTCGATTTGGTTTGACTGTTTTTCATACA........................................................3513000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CCGGTTTTCGATTTGGTTTGACTGTTTTTC.............................................................30111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CCGGTTTTCGATTTGGTTTGACTGT..................................................................2512910000000000000000000000000000000500000100000000000000000100003000000000000000000000001000010011760430000000000000005800000000000000000000010000000000000000000000000000000000000000000000000000000
.......................................CCGGTTTTCGATTTGGTTTG.......................................................................20136453633894496313510197261097818133101211276262216540312262480234158219211269265722284101357351297691307242665311111602500461033130121314037571652237023011194617120119000191259946153144032450113300202007200100207010110014000133000000000000000000000
.......................................CCGGTTTTCGATTTGGTTTGACTG...................................................................24110650102221580711522330102110130003021010101000201010020000000002100005000000000001000000000200001588114300000000000106022070000100100010001003000000000000002000000000000000000000000000000000000000000
.......................................CCGGTTTTCGATTTGGTTTGACTGTTT................................................................271230000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001207000000000000000200000000000000000000000000000000000000000000000000000100000000000000000000000
.......................................CCGGTTTTCGATTTGGTTTGACTGTTTTTCATA..........................................................3312000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CCGGTTTTCGATTTGGTT.........................................................................18123504531823296001931001023030010000000073101010301000760000000000030019400010201000001700000130001010102000000100001300174000000120000001200001230020000000000000001001103000000000000000000000000000
.......................................CCGGTTTTCGATTTGGTTTGA......................................................................21115241127447192446262321556696497149125573279876122591824710771425647822632136224374262538341527336236298512521049221262139192417403220712192142114165347933007991117351089331755615032193572987036410611155553845158556632416037821172284124921020646400491461798113261230632642951902351802201301850149129608111412105007119310853100202100000000100010
.......................................CCGGTTTTCGATTTGGTTTGACTGTT.................................................................261340000000101000000000000000000000000000000000000000000001001000000000000000000010000000000000001109000000000000000600000000000000000001010000000000001000000000000000000000000000000000000000000
.......................................CCGGTTTTCGATTTGGTTTGACTGTTTTT..............................................................291150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CCGGTTTTCGATTTGGTTTGACT....................................................................23130840918901134755449654729496541501627593361310045996443541422755767246255233802032166851125047190330714803290390411762951236317744266528413773805124934307071113133318681076781153627788359372120182867845363143035380474658510643357281198530320752331723919125879114131310883901102177314409831615399745243474135231343211945821739880408105184728353948779115872160436291697967677531470684596033762320334952045814401909223211913972841031821222723242936149626610110077219534561751541013671133686844113589344222012165103164044993035413310163210915240100000
........................................CGGTTTTCGATTTGGTTTGACTGT..................................................................2411000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CGGTTTTCGATTTGGTTTGAC.....................................................................21114262811025273781785013151514403536171854516531521127118212792110092207739111201043130104124350144111350001214481001037501000323262708102001200300000039001807072018010221401130031001000002000110003001020000000010000000000100000000000
........................................CGGTTTTCGATTTGGTTTG.......................................................................191690402111000000800200000000000000000000000007100100100000000000119200010000000003100500000000000000000000000000200030000000200000000000000000000000000010000000000000000000000000000000000000000
........................................CGGTTTTCGATTTGGTTT........................................................................1819110001100000030000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CGGTTTTCGATTTGGTTTGACT....................................................................2213756912417436801021807223329733365396695858335133145074028924421219387198701322122276859158304406325833267339029120303156951031871446230436713611722817177446829101025847187177556613165746152957359634462113722541125014216324102023332422460103247177781271311664120479138071865014137430816325122240234436350121213112621655018273085034517701600209111020306004200001100100000
........................................CGGTTTTCGATTTGGTTTGA......................................................................20146021631478237110044144280145500316069461520120005202001000101000000001210151400410004900400910000080000301000012610200000015000500021210301100001200000000000001000000000000000000100000000000000000000000000
........................................CGGTTTTCGATTTGGTTTGACTG...................................................................231261019298212524126231131701210111071101402401010090072100000100000000100110000001010002009000000401000000000100000000001000000000000000200000000000000010101100000000000001100010000000000000000000000000
.........................................GGTTTTCGATTTGGTTTGACT....................................................................211517916121114181327379330662171407319153222723754302350243423121116211030110001206710020104000013700400242001000000000110210000300030000001300000000510302000000100000000000000001100000000000000000000000000000
.........................................GGTTTTCGATTTGGTTTGA......................................................................19135030001200101610000000000000000600000000000000010000000000000002000000000000002000000000000000000040001020000100000000000000000000100000000000000000000000000000000000000000000000000000000000
.........................................GGTTTTCGATTTGGTTTG.......................................................................1818000000000001000000000000000000040000000000000000000000000001000000000000000000100000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GGTTTTCGATTTGGTTTGAC.....................................................................201760122022000001411301010000500500301001000001010100000000001000011000000100000040000000000011000100000000000004000100000000000002100000000000000000000000000000000000000000000000000000000000000
.........................................GGTTTTCGATTTGGTTTGACTG...................................................................2212000000000000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GTTTTCGATTTGGTTTGA......................................................................18113030010000000000000000000000040000000010000000000000000000000001000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000
..........................................GTTTTCGATTTGGTTTGAC.....................................................................191550211010011012000100400002501006000001000001000000010000000000001000000000000000000000000000000000180000010000001000000000000000000100001000000000000000000000000000000000000000000000000000000
..........................................GTTTTCGATTTGGTTTGACT....................................................................2014265531474484142301113420926221444824121743005215141126100412101100100001001000001000000000200000000000111000026000010200090001000000012200027003000000400110000000003000000004400000000000000010000000000000
...........................................TTTTCGATTTGGTTTGAC.....................................................................18133100201001010000011000100000000000005000000300000000000000000000000000010100000200000000000100010080000010000000000000100000000000000000000000000000000000000000000000000000000000000000000000
...........................................TTTTCGATTTGGTTTGACT....................................................................1912651438335111131320124111050082211598840011202200270000100300000020000000001001000100020000001400000000000120001002001400011000000413000000200000020030000001000000000000000000000000010000000000000000
...........................................TTTTCGATTTGGTTTGACTG...................................................................2011000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TTTCGATTTGGTTTGACT....................................................................18125336044991513251315212110111004160451790100311191024000900000000000000000000300110000003000000000001100000100021210001000000001000322000000300000000000000000000000000000000000001000000000000100000000
.............................................TTCGATTTGGTTTGACTG...................................................................1812000100000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TCGATTTGGTTTGACTGTTTT...............................................................2111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TTTGGTTTGACTGTTTTTCA............................................................2011000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................ACTGTTTTTCATACAAGTGA...................................................2011000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TGTTTTTCATACAAGTGAGATC...............................................2211000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GTTTTTCATACAAGTGAGAT................................................2011000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TTTCATACAAGTGAGATCATTTTGAAA......................................2711000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
..................................................................TTCATACAAGTGAGATCATTTTGAAAGC....................................2811000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ATACAAGTGAGATCATTTTGAAAGCT...................................2611000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ATACAAGTGAGATCATTTTGAAAGCTGATT...............................3011000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ATACAAGTGAGATCATTTTGAAAGC....................................2511000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TACAAGTGAGATCATTTTGA........................................2011000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TACAAGTGAGATCATTTTGAAAGCTGAT................................2811000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................TACAAGTGAGATCATTTTGAAAGCTG..................................2611000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
......................................................................TACAAGTGAGATCATTTTGAAAGCT...................................251231000000000000030000000000000000000000001900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................ACAAGTGAGATCATTTTGAAAGCTGATT...............................2819000000000000000000000000000000000000000001003000000000000000001000000020000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................ACAAGTGAGATCATTTTGAAAGC....................................2312000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................ACAAGTGAGATCATTTTGAAAGCTGAT................................2712000000000000000100000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................ACAAGTGAGATCATTTTGAAAGCTGA.................................2611000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................CAAGTGAGATCATTTTGAAAGCT...................................2311000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................CAAGTGAGATCATTTTGAAAGCTGAT................................2611000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................CAAGTGAGATCATTTTGAAAGCTGATT...............................2715000000000100000000000000000001000000000000002000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................AAGTGAGATCATTTTGAAAGCTGATT...............................2618001000020010000000000000001001000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................AAGTGAGATCATTTTGAAAGCTGAT................................2512000000010000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................AGTGAGATCATTTTGAAAGCTGATT...............................25123000000070000000000000000001002001000200000006000000000000000000000010020000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................AGTGAGATCATTTTGAAAGCTGAT................................2417000000020000000000100000001000000000000000000000000000000000000000000000000000000000000010000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................AGTGAGATCATTTTGAAA......................................1811000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................AGTGAGATCATTTTGAAAGCT...................................2112000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................AGTGAGATCATTTTGAAAGCTGA.................................2311000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................GTGAGATCATTTTGAAAG.....................................1812000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000000000000000
...........................................................................GTGAGATCATTTTGAAAGCTGATTT..............................2515010000000000010100000000000000001000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................GTGAGATCATTTTGAAAGCTGATT...............................2415781030202020112410233838116242813504835533114766004471213002014020015012220032011000020210001010000000001210120101100000000000000010000000000500000000000000000000000000000000000000000000000000000000000000000
...........................................................................GTGAGATCATTTTGAAAGC....................................1911000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................GTGAGATCATTTTGAAAGCTGA.................................2213902285741718322812762248703693420216026160020303424400413022034100000100001100030020001011001000020000021002101000111000000100000000000000000000000000000000000000000000001100000000000000000000000000000
...........................................................................GTGAGATCATTTTGAAAGCTGAT................................23121721118721826741155024421949743108364203035233637625272028929410332192251581122291142101116441201101549341142130115001232120321184401302221302131101102300000330001100010000000000000000000000000000000000000000001100000000000000000000000000000
...........................................................................GTGAGATCATTTTGAAAGCTG..................................21135043100010101910002001001001000001100100010000000000000000000000200000010000000000000000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................GTGAGATCATTTTGAAAGCT...................................20111201200000011000010000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGAGATCATTTTGAAAGCTGATTTTGTCAATG......................3217000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGAGATCATTTTGAAAGCTGATTTTG............................2614602001000000000021000000000000001000000000000000020010001000001001000000000000000100000000000018111000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGAGATCATTTTGAAAGCTGATTTT.............................25116331015124354793441794337391213211310756095536100085316111214230455311402617323889026250523121300260013831134026402433101002181322152107166910527443800202201900008512000211012052001000000000010100400000020000000010000000000000000000000
............................................................................TGAGATCATTTTGAAAGCTGATTTTGTCAATGA.....................3311000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGAGATCATTTTGAAAGCT...................................19116059171470318515262745295964617567025458537349174423481432243553051962100482855051512601271349021242340729116915575089310361360142672307980106710355511174641642221995841902571377715011457640897138555521601061491203693754094871155626377131741845216118745868144454417247438403945976304063428710211511746770423030313138655992415262203022492210819354345162101456411021328813803400811221052301710124221300180000000180000000043000000
............................................................................TGAGATCATTTTGAAAGCTGATTTTGTC..........................281190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGAGATCATTTTGAAAGCTGATTTTGTCA.........................29126400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012301190000000000000002200000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGAGATCATTTTGAAAGCTGA.................................2115826322356252369162523751225546111201557059803175584537070125694183316153151675309953976333574886039086457323328683599267924427329813364330211632180971176479816973027307820951504216057891624679211196581128080749741202105714131234794805119885981910658144338603689341530783696722941964454411207716382653221864202289277017422523314272161962168108520196822898324866539710617691366287255104410398921710098288421331335572465282214743117907234527621551058146111722204071091793421211784846513282937827340962545595017246432503638159611050942161650924728241131461025360621405000000
............................................................................TGAGATCATTTTGAAAGCTGATTTTGTCAATGAA....................3413400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020012000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGAGATCATTTTGAAAGCTGATTT..............................241349825347861854531330122092884111710163251802299628952258203834514302092930369378253747106045385525724261103108481656180513101716191541813011124396389062319146759161005769137688546813587397372291261981305461296083496899614406436005814185135302304104506400398680386355206523941528068330050817471023255361840309329111712331756916054212645339992340449550839431674291063149661081082861363330307200524042322617732065541183360992419830853394784050960109562841214141281608906130040153701501104900200700200000000
............................................................................TGAGATCATTTTGAAAGCTG..................................2011019961046971173020734938371664197237852931013591197247302817550246217451318103177253253323927834629985143011985208147927353411097177202337184202340511831913921868421043348151831712471591387610821850184507893211572685383454936510670313494477034162914491447310050152303762672591248535753784287538212739216282843942521901223535159671135017010188019896430887928155621166680832623191947709188721810015752761238660949016228384033520120392071413008000000
............................................................................TGAGATCATTTTGAAAGCTGATTTTGTCAA........................30114000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000901000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGAGATCATTTTGAAAGCTGAT................................221137917572011091881292148607945270453803010516005180662508604412882513092405493158353041605089283610011877111336992301123732921535361385231192571232881857326847812538586621665031230294993612448784752307527517810623447570469824086535871909741215613485051432388202246435883218133131631883651632873836506283993706829862314174580125411339531448317299142471388613146178332791851317125631716514155102795004113149836109983154415651867127552119391687034361518112769681940768917472915906476859423881982671683842899471743521354658402496327528922978288264596459192147561327333628191377937153371963775889999402631066404475398271463460271376102745826824318760120434038922015956825012065328212598202115129103794514285811221227946334606241317342027102523285594105135000000
............................................................................TGAGATCATTTTGAAAGC....................................1812334280283537714357267370184611972482064269045507311203596728599362332101154085147212662491041883651676404710125129113680337872083714371033750111340191720371084201418420239121222497865373170391194523302229218451100021181236300790011382364336031001624100136410071000000110060050129420110140020000100930000000015000000
............................................................................TGAGATCATTTTGAAAGCTGATT...............................23119886813127834213727464712761056556955300305987763352101375773896278006479103868680656584834786737542248851251886134055115340432311130626231573330738518144425669316741722636722692315550818483910769213609620897015921412261915559715344314932415078269864514231244376518610150410991810389611458597267103700601939702082830854797223577718650044953867471556345684751971543534551037315457703399297304337641308421324030634699402233636231356134402623323381698524543187732586019985219982102324805223912413314126233212038419141140371080518303104201266666161344012296117451193310967987494143748374859942156534150403363112187429383850328284925451484132182238524462260662355178125719391511147012521268105910831248798114887985084678963224552757856858741039824139745011237248321321253520717819310816021381387696157653462937493140194011100
............................................................................TGAGATCATTTTGAAAGCTGATTTTGT...........................27121000000000000000000000000000000000000000000000000000010010000010010000000000000000000000000000906000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGAGATCATTTTGAAAGCTGATTTTGTCAATGAAT...................35113000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000603000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGAGATCATTTTGAAAGCTGATTTTGTCAAT.......................31110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000802000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................GAGATCATTTTGAAAGCTGATT...............................221106023694181392711951441522401411451301191751802016798306559596424441456061489752106732356414338425940293020131387121778426172926111117710912630754351661050295173841553320635710217714531288408139448317238101524269557684222223116316120011590312014162029021114041101003132015020010000230000100010000100100100000000000
.............................................................................GAGATCATTTTGAAAGCTGATTT..............................23118563532371011125412160000100010005002000170200300700100000010400480001000235008001000200000712010130002000012110000000001000001000000000000100001000000000000000000000000000000000000000000000000
.............................................................................GAGATCATTTTGAAAGCTG..................................19111828421111010002230200000001000401300000000012010008000000010005005000030040001000000200030000000001002002241000000000000000003000000000000000000000000000000001000000000000000000000000000000000
.............................................................................GAGATCATTTTGAAAGCT...................................181565471011111010000721020200000000000000000001000001000000000000002000000010010000003120000001000000000000000000000000000160000001141000000000000200000000000000000000000000000000000000000000000000000
.............................................................................GAGATCATTTTGAAAGCTGA.................................201677627613332081152521103015674614544314112725025110602221110232280013002000210002200740001100600010003000000320104000211007020222000011001000000002000000140000100001000000000001000000000000000000000000000000000000
.............................................................................GAGATCATTTTGAAAGCTGAT................................21146262701993679783397103556041463310719920616191013220241663937110241844106456514271375638348235258541745204424720371534412125001891177221069825512104141628831218015102103802017273527273021533002310031010000031006100202001100434000000000000000000000010000000000000000000
.............................................................................GAGATCATTTTGAAAGCTGATTTT.............................2417000000000000000000000000000000000000000000000000000000000002000000010021001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AGATCATTTTGAAAGCTG..................................181637000001310005200101000000140000356000000000500040000000000000001000010000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000001000000000000000000000000
..............................................................................AGATCATTTTGAAAGCTGATT...............................2111874117352686224020382311162342328523017898186710748128152384314833121013612839114016403364422004460116703036031912003920182014006514171800310240003110002020000021100101030040071001070060300004000000020001100003000000000010000000000000
..............................................................................AGATCATTTTGAAAGCTGAT................................201164418010503496916917001116536382213673004172201114421864629522358245420143301021510511200590008014210110003000011000240300010001000000000000016000021010105640120000010020000001000000010000000000000000000000000000000000
..............................................................................AGATCATTTTGAAAGCTGA.................................191279171231552428201394160106024019271170162211000002700602000010000000001001000020001003000000000100100000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000
..............................................................................AGATCATTTTGAAAGCTGATTT..............................221377130151000001102000000002000000000010000000000000000000000000000000000001000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................GATCATTTTGAAAGCTGAT................................1914108013116111353140021298250180061225271319113502100352821300001103100110100000600011003002111100010020202030020000001001001100100000000000000000000000030010000000101000000000000001000000000000000000000000
...............................................................................GATCATTTTGAAAGCTGATTT..............................21119710000000010001000000000000000000010000000000001001000000000000110010001001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................GATCATTTTGAAAGCTGATTTT.............................2212000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................GATCATTTTGAAAGCTGA.................................1811151520010030000120400000000000100015411011002300000007000200000001001000000013000005100000000001000010001000000000000001000000000030000000000000000000000000000010001100000000000000000000000000000
...............................................................................GATCATTTTGAAAGCTGATT...............................201104996183213071716477716496103132133163299973152481693507292980132116791018733613630221250201112442018407001031100520547003010301110000000000000010000010003116010001010120080001004002001010002200002000000000000000000000000
................................................................................ATCATTTTGAAAGCTGATT...............................191564788311382185010171172434246224711053532622041554816532913226522432614691741171362992111832976211231394311606418205071126134249204059044991217101027171184408544576501019920811831732322001050000000200103120001020005021100100200001002020000000002000000000000000000000000
................................................................................ATCATTTTGAAAGCTGAT................................18118996980614237255457726768612717030489333985223078192591338931319481862132354193662366930871221936786921418339116253171865217454310162717411027121568772146658342595505346254204121406019311112100000011000202000000000000000000000000000000000000000000000000000000000000000000
................................................................................ATCATTTTGAAAGCTGATTT..............................20133904310000000010000000000100020001000100400010000000020000000000100000000001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TCATTTTGAAAGCTGATTT..............................19129800300100001321000010000000000300000000000000000000000000000000100010003000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................TCATTTTGAAAGCTGATT...............................18119122242211803462134858142035157954274523333787819508984820191229153145212261212021015842510740111330200192173612139014300192115028010157003000404212370040010000040012006010000500020120290000000020111020001110002000000000010000100000000
..................................................................................CATTTTGAAAGCTGATTT..............................1811034321302010001026010010000041090201200210000001300000001000000001200000011001000000300001001000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................ATTTTGAAAGCTGATTTT.............................1813000000000000000010000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................TGATTTTGTCAATGAATACCACATTC..........2611000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................GATTTTGTCAATGAATACCA...............2011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................ATTTTGTCAATGAATACCACATTCCA........2611000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Antisense strand
                                                                                                                                  SizeBlastTotalSRR032095 AGO1 IP dcr2 knockdown V067 S2-NPV018 Kc167 cellV076 ML-DmBG3-C2V024 kc167 cellV020 S2R+ cellV025 S2R+ cellV082 embryo 14-24hrGSM280088 S2cell (AGO1IP) V098 dcr-2[L811fsX] ovaryV097 CS ovaryV026 1182-4H cellSRR029028 untreated (mock) V008 S2-DRSCSRR029031 loqs-ORF knockdown V088 r2d2[1] ovary total RNA  V033 CMEW1 Cl.8+ cellV090 CS  male total RNA  V019 GM2 cellV075 ML-DmBG1-C1V028 CMEW1 Cl.8+ cellV064 ago2[414], ovary, AGO1IPV089 ago2[414] ovary total RNA  V011 Sg4V063 CS,ovary,AGO1IPSRR029032 r2d2 knockdown V083 male, one dayV065 dcr-2[L811fsX], ovary, AGO1IPSRR029030 dcr-2 knockdown V081 embryo 2-6hrSRR029033 lacZ knockdown SRR032094 ago2 knockdown V001 IR-SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1 V009 CMEL1V066 r2d2[1], ovary, AGO1IPV084 female, one daySRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1 SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1 SRR029029 dcr-1 knockdown V021 ML-DmD21 cellSRR014275 Ovary_rep1 LK_P SRR032093 ago1 knockdown GSM379065 Zuc Heterozygote SRR031703 Total small RNAs from r2d2 homozygous flies SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1 V002 IR+SRR031696_2152 GSM379064 Vasa Mutant V010 MLDmD20c5SRR014277 Ovary_rep1 NA_P SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb GSM379063 Vasa Heterozygote SRR014280 Ovary_rep1 w1118_P SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb GSM379057 Krimp Mutant SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb SRR014273 Ovary_rep1_Har_P SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1 SRR031701 Total small RNAs from r2d2 heterozygous flies SRR014282 Ovary_rep1 wK_P GSM379056 Krimp Heterozygote SRR029633 total small RNAs from hen1 homozygous flies S32 s2+48 #2GSM379061 Squ Heterozygote SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb GSM424741 S2 pKF63 transiently transfected SRR031697 Total small RNAs from dcr-2 heterozygous flies GSM379052 Aub Heterozygote GSM379066 Zuc Mutant SRR031692 Total small RNAs from Oregon R S30 s2-48 #2GSM379060 SpnE Heterozygote GSM379062 Squ Mutant SRR031699 Total small RNAs from dcr-2 homozygous flies SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb GSM379051 Armi Mutant S31 s2+48 #1SRR032096 AGO2 IP dcr2 knockdownGSM379054 Flam Heterozygote GSM379053 Aub Mutant S33 KC-48 #2GSM379050 Armi Heterozygote GSM379058 S15 S2 -48 #1SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies GSM379067 SpnE Mutant OSS6 Drosophila OSS cell small RNA libraries, rep2 SRR001345 ago2 non-beta-eliminated OSS2 Drosophila OSS cell small RNA libraries, rep1 GSM280082 WT ovaries (18-29nt) OSS8 Drosophila OSS cell small RNA libraries, rep4 GSM280084 loqs-/- ovaries (18-29nt) GSM467729 WT OSS7 Drosophila OSS cell small RNA libraries, rep3 GSM467730 r2d2 GSM379059 SRR032092 mock oxidized SRR001349 heterozygous dcr-2_untreated GSM379055 Flam Mutant S16 KC -48 #1GSM280083 dcr-2-/- ovaries (18-29nt) SRR001338 IR non-beta-eliminated SRR001664 homozygous dcr-2_untreated SRR001347 ago2 untreated SRR001341 WT_males non-beta-eliminated SRR001339 WT_females non-beta-eliminated S35 KC+48 #2GSM280087 S2cell (AGO2IP) S29 male head #1SRR001343 dcr-2 non-beta-eliminated GSM467731 loq SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies SRR010954 Aub trans-heterozygotes, oxidized GSM424740 S2 pKF63 stably transfected SRR001344 dcr-2 beta-eliminated S8 S2-48,+48, KC-48, +48 mixS34 KC+48 #1GSM343287 Drosophila Toll 10b mutant embryos S24 male body #2SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies SRR010953 Aub heterozygotes, oxidized SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies S12 6-10h #1 (10)S9 0-1h #3 (7)S22 female head #1GSM424739 S2 parental SRR010959 Ago3 IP in heterozygotes S23 female body #2SRR031693_4 S28 0-2d pupaeSRR010955 Aub IP in Ago3 heterozygotes S10 2-6h #1 (8)S13 6-10h #2 (11)S19 2-4day pupae #1SRR001348 ago2 oxidized SRR023400 total RNA extracted from P19 cells S14 0-1hr #1 (A)GSM239052 S2 cells, non beta-eliminated SRR023399 RNA bound by P19 protein S2 female headS7 12-24hr embryoSRR010956 Piwi IP in Ago3 heterozygotes GSM180337 tissue culture cells (S2 only) S27 0-1d Pupae (w)SRR001337 WT_females beta-eliminated SRR010958 Piwi IP in Ago3 trans-heterozygotes S21 disk #2S5 imaginal discSRR023197 RNA Library from S2 control cells S3 male bodyS4 female bodyGSM280085 WT testes (18-24nt) S11 2-6h #2 (9)S25 1st instar #1SRR010960 wt, oxidized SRR001346 ago2 beta-eliminated S17 3rd inster #1SRR010957 Aub IP in Ago3 trans-heterozygotes SRR023407 RNA bound by NLS-P19 protein S1 male headGSM239051 S2 cells, beta-eliminated S18 3rd inster #2GSM180333 late embryo (12-24) S26 1st instar #2GSM239041 fly heads, non beta-eliminated GSM180328 adult heads (female heads, male heads) GSM239050 fly heads, beta-eliminated S20 2-4day pupae#2SRR001340 IR beta-eliminated GSM180332 mid embryo (6-10) GSM180329 adult bodies (female bodies, male bodies) SRR010952 Ago3 trans-heterozygotes, oxidized GSM180335 imaginal discs GSM180331 early embryo (2-6) SRR023402 total RNA extracted from NLS-P19 cells SRR001342 WT_males beta-eliminated GSM180334 larvae: 1st instar and 3rd instars GSM180330 very early embryo (0-1) GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day GSM246084 D. melanogaster adult male heads 454 GSM280086 WT ovaries (AGO2IP) SRR010951 Ago3 heterozygotes, oxidized GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006) GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0 GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries
..........TTTGTAACTCCAATGATTTGA...................................................................................................2111000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................AAGTGAGATCATTTTGAAAGCTGA.................................2414000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................AGTGAGATCATTTTGAAAGCTGA.................................2311000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................AGTGAGATCATTTTGAAAGCTG..................................2214000000000000000000000000000000000000000000000000000000000000000100000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................GTGAGATCATTTTGAAAGC....................................1911000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................GTGAGATCATTTTGAAAGCTG..................................2112000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................GTGAGATCATTTTGAAAGCTGA.................................2212000000000000010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................TGAGATCATTTTGAAAGCTGA.................................2111000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000