Page generated on Fri Oct 15 12:01:50 2010

dme-mir-1007




dme-mir-1007

View dme-mir-1007 on miRBase
miRNALengthPerfect(sense)Perfect(antisense)5' moR5'armLoop3'arm3' moROtherLoop SizeMatureStar
dme-mir-100711432711118714304624193046187


AGGATGACAACGAATCTGTACAGTGTAAGCAGTGTTTGAACTCGATCTTGGTTCTTGGACTCTTGATAAGCTCAATTAACTGTTTGCAGCGGACGGGATCTTCTCGGAGAATCG
........................(((((((((..((((.((..(((..((((....))).)..))).)).))))...)))))))))...........................-20.00
..........(((.(((......((((((((((..((((.((..(((..((((....))).)..))).)).))))...)))))))))).....((((.....)))).))).)))-28.90
Sense strand
                                                                                                                  SizeBlastTotalSRR029633 total small RNAs from hen1 homozygous flies SRR031696_2152 SRR031703 Total small RNAs from r2d2 homozygous flies SRR031697 Total small RNAs from dcr-2 heterozygous flies SRR031692 Total small RNAs from Oregon R SRR031699 Total small RNAs from dcr-2 homozygous flies SRR031701 Total small RNAs from r2d2 heterozygous flies S29 male head #1SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1 SRR001349 heterozygous dcr-2_untreated SRR001338 IR non-beta-eliminated SRR001664 homozygous dcr-2_untreated V010 MLDmD20c5OSS2 Drosophila OSS cell small RNA libraries, rep1 SRR001347 ago2 untreated V018 Kc167 cellSRR001345 ago2 non-beta-eliminated V024 kc167 cellSRR001341 WT_males non-beta-eliminated SRR001339 WT_females non-beta-eliminated V008 S2-DRSCV019 GM2 cellSRR001343 dcr-2 non-beta-eliminated OSS8 Drosophila OSS cell small RNA libraries, rep4 OSS7 Drosophila OSS cell small RNA libraries, rep3 OSS6 Drosophila OSS cell small RNA libraries, rep2 SRR010955 Aub IP in Ago3 heterozygotes V009 CMEL1V021 ML-DmD21 cellS24 male body #2V020 S2R+ cellS30 s2-48 #2SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies V067 S2-NPS22 female head #1S32 s2+48 #2V026 1182-4H cellV083 male, one dayV090 CS  male total RNA  GSM467729 WT GSM379065 Zuc Heterozygote SRR010958 Piwi IP in Ago3 trans-heterozygotes V033 CMEW1 Cl.8+ cellS19 2-4day pupae #1S15 S2 -48 #1V025 S2R+ cellS2 female headV002 IR+V098 dcr-2[L811fsX] ovarySRR010954 Aub trans-heterozygotes, oxidized V028 CMEW1 Cl.8+ cellV097 CS ovaryGSM467730 r2d2 SRR029028 untreated (mock) V084 female, one dayS23 female body #2GSM239052 S2 cells, non beta-eliminated V063 CS,ovary,AGO1IPSRR032095 AGO1 IP dcr2 knockdown SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies SRR001348 ago2 oxidized V082 embryo 14-24hrGSM379053 Aub Mutant SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies SRR001344 dcr-2 beta-eliminated S27 0-1d Pupae (w)S35 KC+48 #2S9 0-1h #3 (7)V088 r2d2[1] ovary total RNA  GSM379063 Vasa Heterozygote GSM280088 S2cell (AGO1IP) V075 ML-DmBG1-C1GSM239041 fly heads, non beta-eliminated GSM280085 WT testes (18-24nt) S16 KC -48 #1GSM180328 adult heads (female heads, male heads) S31 s2+48 #1S33 KC-48 #2V011 Sg4V001 IR-GSM379060 SpnE Heterozygote S28 0-2d pupaeS13 6-10h #2 (11)SRR001337 WT_females beta-eliminated SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb SRR014273 Ovary_rep1_Har_P S21 disk #2GSM379051 Armi Mutant SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb GSM379062 Squ Mutant GSM379059 S12 6-10h #1 (10)GSM379057 Krimp Mutant SRR010957 Aub IP in Ago3 trans-heterozygotes SRR023400 total RNA extracted from P19 cells SRR023407 RNA bound by NLS-P19 protein GSM379052 Aub Heterozygote GSM467731 loq SRR010959 Ago3 IP in heterozygotes S17 3rd inster #1SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1 V081 embryo 2-6hrSRR010953 Aub heterozygotes, oxidized GSM379058 S26 1st instar #2SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1 S4 female bodyGSM379056 Krimp Heterozygote V076 ML-DmBG3-C2SRR010956 Piwi IP in Ago3 heterozygotes GSM180337 tissue culture cells (S2 only) V065 dcr-2[L811fsX], ovary, AGO1IPS1 male headV089 ago2[414] ovary total RNA  GSM379064 Vasa Mutant S3 male bodyS8 S2-48,+48, KC-48, +48 mixS5 imaginal discSRR032096 AGO2 IP dcr2 knockdownS10 2-6h #1 (8)GSM280083 dcr-2-/- ovaries (18-29nt) SRR010951 Ago3 heterozygotes, oxidized GSM379066 Zuc Mutant GSM379067 SpnE Mutant SRR014282 Ovary_rep1 wK_P GSM180335 imaginal discs SRR029031 loqs-ORF knockdown S7 12-24hr embryoSRR031693_4 GSM379050 Armi Heterozygote SRR010952 Ago3 trans-heterozygotes, oxidized V066 r2d2[1], ovary, AGO1IPSRR001340 IR beta-eliminated GSM280084 loqs-/- ovaries (18-29nt) S18 3rd inster #2SRR014275 Ovary_rep1 LK_P S34 KC+48 #1SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies GSM246084 D. melanogaster adult male heads 454 SRR014280 Ovary_rep1 w1118_P SRR014277 Ovary_rep1 NA_P SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb GSM379061 Squ Heterozygote SRR023399 RNA bound by P19 protein SRR032093 ago1 knockdown GSM180329 adult bodies (female bodies, male bodies) GSM280087 S2cell (AGO2IP) GSM280086 WT ovaries (AGO2IP) S11 2-6h #2 (9)GSM180333 late embryo (12-24) SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1 GSM239051 S2 cells, beta-eliminated SRR032094 ago2 knockdown GSM180332 mid embryo (6-10) S14 0-1hr #1 (A)GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day SRR023197 RNA Library from S2 control cells SRR032092 mock oxidized SRR029033 lacZ knockdown GSM424740 S2 pKF63 stably transfected SRR010960 wt, oxidized SRR023402 total RNA extracted from NLS-P19 cells GSM379054 Flam Heterozygote GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries SRR001342 WT_males beta-eliminated GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006) GSM239050 fly heads, beta-eliminated GSM379055 Flam Mutant SRR029029 dcr-1 knockdown GSM180334 larvae: 1st instar and 3rd instars GSM180331 early embryo (2-6) S25 1st instar #1SRR029032 r2d2 knockdown GSM180330 very early embryo (0-1) GSM424741 S2 pKF63 transiently transfected GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0 S20 2-4day pupae#2SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1 GSM343287 Drosophila Toll 10b mutant embryos GSM280082 WT ovaries (18-29nt) SRR029030 dcr-2 knockdown GSM424739 S2 parental SRR001346 ago2 beta-eliminated V064 ago2[414], ovary, AGO1IP
.GGATGACAACGAATCTGTACA............................................................................................2111000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTAAGCAGTGTTTGAACTCGATCTTG................................................................26112000000000000000000000000002000000000001000010000100000100000000000001100000000000000010002000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTAAGCAGTGTTTGAACTCGATCTT.................................................................2512000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTAAGCAGTGTTTGAACTCGATCT..................................................................2415000010000000000000000000000100000000010000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTAAGCAGTGTTTGAACTCGATCTTGG...............................................................271260000000000000000000000000018000000000000006000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTAAGCAGTGTTTGAACTCGA.....................................................................2118003000000000200000000001000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTAAGCAGTGTTTGAACTCGATC...................................................................23163111000303000300102001001000120102700211000020201304200100000020200003001010000000000000000000000000000000000000102000002000000000000000000000000000000000000000000000000000000000000000000000
........................GTAAGCAGTGTTTGAACTCGATCTTGGT..............................................................2812100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTAAGCAGTGTTTGAACTCGATCTTGGTTC............................................................3011100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTAAGCAGTGTTTGAACTCGAT....................................................................22111000011000001100000000000000000000000010010000200000000000000000000000001000000010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
........................GTAAGCAGTGTTTGAACTCG......................................................................2018100010000000000100000000000000000000010000000000000000000000000000000100000000000000000000000000000000000000000000000020000000000000000000001000000000000000000000000000000000000000000000000
........................GTAAGCAGTGTTTGAACT........................................................................18118104001300000000000000000000000000000020000000000000100200000030000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................GTAAGCAGTGTTTGAACTC.......................................................................19117102100000010000000000000000000000000050000000003000000200000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAAGCAGTGTTTGAACTCGATCTTGG...............................................................2611010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TAAGCAGTGTTTGAACTCGATC...................................................................2214000000000000000000000000000000000000000000200000000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AAGCAGTGTTTGAACTCGATCTTGG...............................................................2518000000000000000000000000004000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
...........................AGCAGTGTTTGAACTCGATCTTGG...............................................................2412000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
............................GCAGTGTTTGAACTCGATCTTGG...............................................................2311000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CAGTGTTTGAACTCGATCTTGG...............................................................2211000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GTGTTTGAACTCGATCTTGGT..............................................................2111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
......................................AACTCGATCTTGGTTCTTG.........................................................1911000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TCGATCTTGGTTCTTGGACT.....................................................2011000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CGATCTTGGTTCTTGGACTCTTGATAA.............................................2711000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................CGATCTTGGTTCTTGGACTCTTG.................................................2311000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GATCTTGGTTCTTGGACTCTTG.................................................2211000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CTTGGTTCTTGGACTCTTGA................................................2011000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TTGGTTCTTGGACTCTTGA................................................1919000000100000100001000000000000003000100000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TGGTTCTTGGACTCTTGATAAGCT..........................................2411000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TGGTTCTTGGACTCTTGA................................................1811000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TTCTTGGACTCTTGATAAGCTCAAT......................................2511000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...................................................TTCTTGGACTCTTGATAAGCTC.........................................2211000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TTCTTGGACTCTTGATAAGCTCA........................................2311000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TCTTGGACTCTTGATAAGCTCAATTAACT.................................2911000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TCTTGGACTCTTGATAAGCT..........................................2011000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TCTTGGACTCTTGATAAGCTC.........................................2111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................CTTGGACTCTTGATAAGCTCA........................................2113000000000000000000000000000000000000000100000001000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TTGGACTCTTGATAAGCT..........................................1811000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TTGGACTCTTGATAAGCTCAA.......................................2112002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TTGGACTCTTGATAAGCTC.........................................1911000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TGGACTCTTGATAAGCTCAATTAACT.................................2611000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CTCTTGATAAGCTCAATTAACTGTTT.............................2611000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TCTTGATAAGCTCAATTAAC..................................2011000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................TTGATAAGCTCAATTAAC..................................1811000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATAAGCTCAATTAACTGTTTGCA..........................2316100010001000000100000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATAAGCTCAATTAACTGTTTGC...........................2211100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATAAGCTCAATTAACTGTTTGCAG.........................2412000000001000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TAAGCTCAATTAACTGTTTGCA..........................2211311141721196512433716622283430713241820142828122311810100131417101259151192329010697132201243452403203135502302033314100202002121202101000100010000001100102100100011000000110010000000010000000000000000000000000000000000000000000
..................................................................TAAGCTCAATTAACTGTTTGCAGCGGA.....................2711000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TAAGCTCAATTAACTGTTTGC...........................21183110613210448454888218221917746351299106162210112107032215431000100001012021021500140100010321200000001120100000101000001000001000020110000000100101001000000000000000000000000000000000000000000000000000000000
..................................................................TAAGCTCAATTAACTGTTTGCAG.........................231654256688419996121952318215111250011501713150661791125211701234103304342016113014202160111001021422340211101241030213101012111201000000100002000000100001101100111000000000000000000000000000000000000000000000
..................................................................TAAGCTCAATTAACTGTTTG............................2011482116412488011652124305001120000101100300114020000000200000000320000000000031300000001000000000000000000020000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
..................................................................TAAGCTCAATTAACTGTTTGCAGC........................2413000000001100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TAAGCTCAATTAACTGTTT.............................19116311100000000000100000000100000000000010000000000020003000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TAAGCTCAATTAACTGTT..............................18123010000001200000000000000000000000000000000000000080000000030100100000000000000001000001100000000000000100000000000000000100000000010000000000000000000000000000000000000000000000000000000000
...................................................................AAGCTCAATTAACTGTTTGCAG.........................2216000203000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................AAGCTCAATTAACTGTTTGC...........................20111210101300000000000000000000000000000100000000000000000010000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................AAGCTCAATTAACTGTTTGCA..........................21118204031300010000010000010000000001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................AAGCTCAATTAACTGTTTG............................1914200002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................AGCTCAATTAACTGTTTGCA..........................2011100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................AGCTCAATTAACTGTTTGCAG.........................2111100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................AGCTCAATTAACTGTTTGC...........................1912100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................GCTCAATTAACTGTTTGCAG.........................2011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................CTCAATTAACTGTTTGCA..........................1811000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................CTCAATTAACTGTTTGCAG.........................1912020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TCAATTAACTGTTTGCAG.........................1812020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Antisense strand
                                                                                                                  SizeBlastTotalSRR029633 total small RNAs from hen1 homozygous flies SRR031696_2152 SRR031703 Total small RNAs from r2d2 homozygous flies SRR031697 Total small RNAs from dcr-2 heterozygous flies SRR031692 Total small RNAs from Oregon R SRR031699 Total small RNAs from dcr-2 homozygous flies SRR031701 Total small RNAs from r2d2 heterozygous flies S29 male head #1SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1 SRR001349 heterozygous dcr-2_untreated SRR001338 IR non-beta-eliminated SRR001664 homozygous dcr-2_untreated V010 MLDmD20c5OSS2 Drosophila OSS cell small RNA libraries, rep1 SRR001347 ago2 untreated V018 Kc167 cellSRR001345 ago2 non-beta-eliminated V024 kc167 cellSRR001341 WT_males non-beta-eliminated SRR001339 WT_females non-beta-eliminated V008 S2-DRSCV019 GM2 cellSRR001343 dcr-2 non-beta-eliminated OSS8 Drosophila OSS cell small RNA libraries, rep4 OSS7 Drosophila OSS cell small RNA libraries, rep3 OSS6 Drosophila OSS cell small RNA libraries, rep2 SRR010955 Aub IP in Ago3 heterozygotes V009 CMEL1V021 ML-DmD21 cellS24 male body #2V020 S2R+ cellS30 s2-48 #2SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies V067 S2-NPS22 female head #1S32 s2+48 #2V026 1182-4H cellV083 male, one dayV090 CS  male total RNA  GSM467729 WT GSM379065 Zuc Heterozygote SRR010958 Piwi IP in Ago3 trans-heterozygotes V033 CMEW1 Cl.8+ cellS19 2-4day pupae #1S15 S2 -48 #1V025 S2R+ cellS2 female headV002 IR+V098 dcr-2[L811fsX] ovarySRR010954 Aub trans-heterozygotes, oxidized V028 CMEW1 Cl.8+ cellV097 CS ovaryGSM467730 r2d2 SRR029028 untreated (mock) V084 female, one dayS23 female body #2GSM239052 S2 cells, non beta-eliminated V063 CS,ovary,AGO1IPSRR032095 AGO1 IP dcr2 knockdown SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies SRR001348 ago2 oxidized V082 embryo 14-24hrGSM379053 Aub Mutant SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies SRR001344 dcr-2 beta-eliminated S27 0-1d Pupae (w)S35 KC+48 #2S9 0-1h #3 (7)V088 r2d2[1] ovary total RNA  GSM379063 Vasa Heterozygote GSM280088 S2cell (AGO1IP) V075 ML-DmBG1-C1GSM239041 fly heads, non beta-eliminated GSM280085 WT testes (18-24nt) S16 KC -48 #1GSM180328 adult heads (female heads, male heads) S31 s2+48 #1S33 KC-48 #2V011 Sg4V001 IR-GSM379060 SpnE Heterozygote S28 0-2d pupaeS13 6-10h #2 (11)SRR001337 WT_females beta-eliminated SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb SRR014273 Ovary_rep1_Har_P S21 disk #2GSM379051 Armi Mutant SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb GSM379062 Squ Mutant GSM379059 S12 6-10h #1 (10)GSM379057 Krimp Mutant SRR010957 Aub IP in Ago3 trans-heterozygotes SRR023400 total RNA extracted from P19 cells SRR023407 RNA bound by NLS-P19 protein GSM379052 Aub Heterozygote GSM467731 loq SRR010959 Ago3 IP in heterozygotes S17 3rd inster #1SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1 V081 embryo 2-6hrSRR010953 Aub heterozygotes, oxidized GSM379058 S26 1st instar #2SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1 S4 female bodyGSM379056 Krimp Heterozygote V076 ML-DmBG3-C2SRR010956 Piwi IP in Ago3 heterozygotes GSM180337 tissue culture cells (S2 only) V065 dcr-2[L811fsX], ovary, AGO1IPS1 male headV089 ago2[414] ovary total RNA  GSM379064 Vasa Mutant S3 male bodyS8 S2-48,+48, KC-48, +48 mixS5 imaginal discSRR032096 AGO2 IP dcr2 knockdownS10 2-6h #1 (8)GSM280083 dcr-2-/- ovaries (18-29nt) SRR010951 Ago3 heterozygotes, oxidized GSM379066 Zuc Mutant GSM379067 SpnE Mutant SRR014282 Ovary_rep1 wK_P GSM180335 imaginal discs SRR029031 loqs-ORF knockdown S7 12-24hr embryoSRR031693_4 GSM379050 Armi Heterozygote SRR010952 Ago3 trans-heterozygotes, oxidized V066 r2d2[1], ovary, AGO1IPSRR001340 IR beta-eliminated GSM280084 loqs-/- ovaries (18-29nt) S18 3rd inster #2SRR014275 Ovary_rep1 LK_P S34 KC+48 #1SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies GSM246084 D. melanogaster adult male heads 454 SRR014280 Ovary_rep1 w1118_P SRR014277 Ovary_rep1 NA_P SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb GSM379061 Squ Heterozygote SRR023399 RNA bound by P19 protein SRR032093 ago1 knockdown GSM180329 adult bodies (female bodies, male bodies) GSM280087 S2cell (AGO2IP) GSM280086 WT ovaries (AGO2IP) S11 2-6h #2 (9)GSM180333 late embryo (12-24) SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1 GSM239051 S2 cells, beta-eliminated SRR032094 ago2 knockdown GSM180332 mid embryo (6-10) S14 0-1hr #1 (A)GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day SRR023197 RNA Library from S2 control cells SRR032092 mock oxidized SRR029033 lacZ knockdown GSM424740 S2 pKF63 stably transfected SRR010960 wt, oxidized SRR023402 total RNA extracted from NLS-P19 cells GSM379054 Flam Heterozygote GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries SRR001342 WT_males beta-eliminated GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006) GSM239050 fly heads, beta-eliminated GSM379055 Flam Mutant SRR029029 dcr-1 knockdown GSM180334 larvae: 1st instar and 3rd instars GSM180331 early embryo (2-6) S25 1st instar #1SRR029032 r2d2 knockdown GSM180330 very early embryo (0-1) GSM424741 S2 pKF63 transiently transfected GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0 S20 2-4day pupae#2SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1 GSM343287 Drosophila Toll 10b mutant embryos GSM280082 WT ovaries (18-29nt) SRR029030 dcr-2 knockdown GSM424739 S2 parental SRR001346 ago2 beta-eliminated V064 ago2[414], ovary, AGO1IP
AGGATGACAACGAATCTGTACAGTGTAAGC....................................................................................3011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000