Page generated on Fri Oct 15 12:01:44 2010

dme-mir-1012



dme-mir-1012

View dme-mir-1012 on miRBase

miRNA	Length	Perfect(sense)	Perfect(antisense)	5' moR	5'arm	Loop	3'arm	3' moR	Other	Loop Size	Mature	Star
dme-mir-1012	108	46793		3	27828		18955		7	15	27828	18955

TAAAGCCACAAATCCAAAAGAACGGTGGGTAGAACTTTGATTAATATTGCTTGAAAAATATTAGTCAAAGATTTTCCCCATAGATTTATCAATTTCGGCAATGTACAA
........................(((((.((((((((((((((((((........)))))))))))))).)))).)))))...........................-23.20
....(((.................(((((.((((((((((((((((((........)))))))))))))).)))).))))).((....))......))).........-28.40
Sense strand

	Size	Blast	Total	V097 CS ovary	V098 dcr-2[L811fsX] ovary	V089 ago2[414] ovary total RNA	SRR031703 Total small RNAs from r2d2 homozygous flies	SRR029633 total small RNAs from hen1 homozygous flies	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR031701 Total small RNAs from r2d2 heterozygous flies	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	SRR001349 heterozygous dcr-2_untreated	V065 dcr-2[L811fsX], ovary, AGO1IP	V063 CS,ovary,AGO1IP	SRR031699 Total small RNAs from dcr-2 homozygous flies	V090 CS  male total RNA	SRR031696_2152	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	SRR001347 ago2 untreated	SRR031692 Total small RNAs from Oregon R	V088 r2d2[1] ovary total RNA	SRR001664 homozygous dcr-2_untreated	V064 ago2[414], ovary, AGO1IP	V066 r2d2[1], ovary, AGO1IP	S29 male head #1	V081 embryo 2-6hr	S32 s2+48 #2	SRR014280 Ovary_rep1 w1118_P	GSM379051 Armi Mutant	SRR001345 ago2 non-beta-eliminated	SRR031693_4	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	S19 2-4day pupae #1	V009 CMEL1	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	S28 0-2d pupae	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	V083 male, one day	V076 ML-DmBG3-C2	SRR014275 Ovary_rep1 LK_P	V082 embryo 14-24hr	SRR001338 IR non-beta-eliminated	V033 CMEW1 Cl.8+ cell	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	GSM379065 Zuc Heterozygote	V008 S2-DRSC	GSM379064 Vasa Mutant	V026 1182-4H cell	S31 s2+48 #1	SRR014277 Ovary_rep1 NA_P	V075 ML-DmBG1-C1	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	V084 female, one day	GSM379057 Krimp Mutant	V010 MLDmD20c5	V024 kc167 cell	S22 female head #1	GSM379063 Vasa Heterozygote	V028 CMEW1 Cl.8+ cell	SRR029030 dcr-2 knockdown	GSM280083 dcr-2-/- ovaries (18-29nt)	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	S30 s2-48 #2	GSM379060 SpnE Heterozygote	SRR001343 dcr-2 non-beta-eliminated	V067 S2-NP	V018 Kc167 cell	GSM379056 Krimp Heterozygote	SRR023400 total RNA extracted from P19 cells	S24 male body #2	S15 S2 -48 #1	S9 0-1h #3 (7)	V025 S2R+ cell	SRR029028 untreated (mock)	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	V021 ML-DmD21 cell	SRR001348 ago2 oxidized	SRR014282 Ovary_rep1 wK_P	S23 female body #2	OSS6 Drosophila OSS cell small RNA libraries, rep2	OSS8 Drosophila OSS cell small RNA libraries, rep4	OSS2 Drosophila OSS cell small RNA libraries, rep1	V020 S2R+ cell	GSM379050 Armi Heterozygote	V019 GM2 cell	SRR023402 total RNA extracted from NLS-P19 cells	SRR001344 dcr-2 beta-eliminated	S10 2-6h #1 (8)	S27 0-1d Pupae (w)	GSM379066 Zuc Mutant	S17 3rd inster #1	SRR023399 RNA bound by P19 protein	V011 Sg4	S2 female head	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	S21 disk #2	S14 0-1hr #1 (A)	OSS7 Drosophila OSS cell small RNA libraries, rep3	GSM379052 Aub Heterozygote	SRR014273 Ovary_rep1_Har_P	GSM379062 Squ Mutant	S33 KC-48 #2	GSM379054 Flam Heterozygote	S5 imaginal disc	SRR032092 mock oxidized	SRR023197 RNA Library from S2 control cells	SRR032093 ago1 knockdown	GSM424740 S2 pKF63 stably transfected	GSM379067 SpnE Mutant	GSM280088 S2cell (AGO1IP)	GSM379058	GSM343287 Drosophila Toll 10b mutant embryos	GSM379061 Squ Heterozygote	GSM280084 loqs-/- ovaries (18-29nt)	SRR001341 WT_males non-beta-eliminated	GSM379053 Aub Mutant	SRR001339 WT_females non-beta-eliminated	GSM280087 S2cell (AGO2IP)	V001 IR-	S13 6-10h #2 (11)	SRR029031 loqs-ORF knockdown	SRR032095 AGO1 IP dcr2 knockdown	S12 6-10h #1 (10)	GSM280085 WT testes (18-24nt)	SRR032094 ago2 knockdown	S16 KC -48 #1	V002 IR+	S1 male head	GSM280082 WT ovaries (18-29nt)	S35 KC+48 #2	GSM467729 WT	S8 S2-48,+48, KC-48, +48 mix	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023407 RNA bound by NLS-P19 protein	S11 2-6h #2 (9)	GSM180328 adult heads (female heads, male heads)	GSM379059	S3 male body	S34 KC+48 #1	SRR032096 AGO2 IP dcr2 knockdown	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	SRR010953 Aub heterozygotes, oxidized	S4 female body	S7 12-24hr embryo	SRR029032 r2d2 knockdown	SRR010959 Ago3 IP in heterozygotes	S18 3rd inster #2	SRR010954 Aub trans-heterozygotes, oxidized	GSM379055 Flam Mutant	GSM467730 r2d2	SRR029033 lacZ knockdown	GSM180335 imaginal discs	GSM180334 larvae: 1st instar and 3rd instars	GSM180337 tissue culture cells (S2 only)	SRR010952 Ago3 trans-heterozygotes, oxidized	SRR029029 dcr-1 knockdown	S20 2-4day pupae#2	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	SRR010956 Piwi IP in Ago3 heterozygotes	S25 1st instar #1	SRR001346 ago2 beta-eliminated	GSM180333 late embryo (12-24)	SRR010960 wt, oxidized	SRR001337 WT_females beta-eliminated	GSM467731 loq	GSM180331 early embryo (2-6)	GSM424739 S2 parental	GSM180329 adult bodies (female bodies, male bodies)	SRR001340 IR beta-eliminated	GSM239052 S2 cells, non beta-eliminated	GSM180332 mid embryo (6-10)	GSM246084 D. melanogaster adult male heads 454	GSM180330 very early embryo (0-1)	GSM239041 fly heads, non beta-eliminated	SRR010958 Piwi IP in Ago3 trans-heterozygotes	GSM239050 fly heads, beta-eliminated	SRR010951 Ago3 heterozygotes, oxidized	GSM280086 WT ovaries (AGO2IP)	S26 1st instar #2	GSM239051 S2 cells, beta-eliminated	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	SRR001342 WT_males beta-eliminated	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM424741 S2 pKF63 transiently transfected	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	SRR010955 Aub IP in Ago3 heterozygotes
...AGCCACAAATCCAAAAGAAC.....................................................................................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......CACAAATCCAAAAGAACG....................................................................................	18	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GGTGGGTAGAACTTTGATTAATA..............................................................	23	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................GTGGGTAGAACTTTGATT..................................................................	18	1	1089	10	7	5	36	104	35	101	123	44	2	0	21	35	24	59	18	16	0	23	1	1	16	4	1	0	1	0	13	2	1	0	0	14	2	0	10	15	1	2	11	1	0	0	9	0	7	0	3	0	0	0	0	8	0	1	11	1	0	4	0	2	0	0	1	4	2	14	0	37	0	0	3	8	0	7	9	10	0	0	1	2	2	12	2	3	112	0	0	0	0	0	1	1	0	2	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	3	0	0	0	1	1	0	0	0	0	0	0	0	2	0	1	1	1	0	0	2	1	0	9	0	10	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
........................GTGGGTAGAACTTTGATTAATA..............................................................	22	1	9972	1549	827	682	193	121	195	134	171	138	99	131	100	168	69	327	89	113	283	60	24	103	77	63	73	113	77	110	157	70	133	161	9	35	70	88	74	88	36	97	13	132	65	33	93	24	91	13	52	174	33	25	7	58	31	151	57	14	32	125	75	22	52	25	20	11	59	55	15	54	22	20	17	54	37	44	69	23	26	19	15	9	7	55	18	39	5	28	11	23	27	41	38	65	9	6	12	9	10	3	8	5	14	11	11	13	29	29	24	20	5	21	3	19	8	14	7	14	27	12	15	21	7	6	0	0	15	7	0	9	8	9	7	6	6	3	6	5	1	1	6	0	1	4	4	6	0	1	0	4	0	0	1	2	1	6	4	1	1	3	3	2	1	1	2	2	0	6	1	0	0	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................GTGGGTAGAACTTTGATTAATATTGCTTG.......................................................	29	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................GTGGGTAGAACTTTGATTA.................................................................	19	1	638	11	10	4	48	54	31	41	54	31	7	4	21	18	28	38	23	14	0	25	0	2	22	1	1	0	0	0	9	0	5	0	0	7	2	0	2	3	2	0	11	3	3	0	2	0	2	0	0	0	0	0	0	3	0	0	4	3	0	0	0	0	1	1	0	0	2	2	0	0	5	2	2	2	6	1	0	1	0	2	0	0	2	1	0	2	3	1	0	0	0	0	0	0	2	0	0	0	0	0	0	1	4	0	1	14	1	2	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	1	0	1	1	4	6	3	1	1	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
........................GTGGGTAGAACTTTGATTAATAT.............................................................	23	1	250	21	22	5	10	3	5	5	4	3	8	3	10	8	11	5	5	9	7	3	0	3	6	0	1	3	0	2	4	2	2	3	0	0	0	0	4	3	2	2	1	0	3	2	1	1	0	0	1	3	0	0	1	2	2	0	0	2	0	0	0	0	0	0	1	1	2	2	0	1	1	0	0	0	0	0	1	0	1	2	0	1	0	1	0	0	0	2	0	1	0	0	1	0	0	3	0	1	1	0	1	0	0	0	0	0	2	0	0	0	2	1	1	0	1	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	7	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................GTGGGTAGAACTTTGATTAAT...............................................................	21	1	14334	1132	954	428	705	338	416	628	717	335	262	340	305	594	413	346	232	263	125	222	97	109	285	165	49	73	34	151	202	69	68	64	35	190	82	52	181	121	43	94	81	70	35	35	77	25	113	44	51	37	41	137	14	136	25	35	70	160	18	32	13	25	36	29	14	84	63	69	21	50	60	23	47	28	50	44	40	34	17	40	96	93	82	36	12	38	7	48	23	21	11	28	39	14	33	23	20	11	50	8	25	2	33	6	14	12	45	30	58	12	45	11	18	7	21	19	3	19	28	9	0	27	34	7	4	14	7	9	18	4	14	5	5	9	9	13	16	6	13	8	12	3	1	5	1	0	1	6	2	1	3	0	2	0	0	2	0	4	0	3	2	0	1	3	1	0	0	0	1	2	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................GTGGGTAGAACTTTGATTAA................................................................	20	1	1468	33	25	2	154	109	61	106	55	73	5	10	54	41	63	31	47	41	2	49	3	1	69	1	13	1	2	1	23	1	18	1	1	16	4	1	20	11	6	7	16	2	1	3	6	0	5	1	0	3	0	0	0	8	3	0	3	17	2	1	6	0	0	8	1	3	1	2	1	4	7	4	2	4	0	4	7	9	0	5	8	10	10	0	1	4	0	2	0	3	0	5	5	0	6	0	4	0	9	0	1	0	6	0	0	18	2	9	0	0	2	0	19	0	1	2	0	2	0	1	0	0	0	0	0	2	7	0	2	0	0	8	0	0	0	0	2	0	1	2	0	0	0	0	1	0	0	0	0	0	5	0	0	0	0	2	0	0	0	0	0	0	1	0	0	1	0	0	2	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................GTGGGTAGAACTTTGATTAATATT............................................................	24	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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................................................................TCAAAGATTTTCCCCATAGA........................	20	1	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................CAAAGATTTTCCCCATAG.........................	18	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................AAAGATTTTCCCCATAGA........................	18	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................TCCCCATAGATTTATCAATT..............	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Antisense strand

	Size	Blast	Total	V097 CS ovary	V098 dcr-2[L811fsX] ovary	V089 ago2[414] ovary total RNA	SRR031703 Total small RNAs from r2d2 homozygous flies	SRR029633 total small RNAs from hen1 homozygous flies	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR031701 Total small RNAs from r2d2 heterozygous flies	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	SRR001349 heterozygous dcr-2_untreated	V065 dcr-2[L811fsX], ovary, AGO1IP	V063 CS,ovary,AGO1IP	SRR031699 Total small RNAs from dcr-2 homozygous flies	V090 CS  male total RNA	SRR031696_2152	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	SRR001347 ago2 untreated	SRR031692 Total small RNAs from Oregon R	V088 r2d2[1] ovary total RNA	SRR001664 homozygous dcr-2_untreated	V064 ago2[414], ovary, AGO1IP	V066 r2d2[1], ovary, AGO1IP	S29 male head #1	V081 embryo 2-6hr	S32 s2+48 #2	SRR014280 Ovary_rep1 w1118_P	GSM379051 Armi Mutant	SRR001345 ago2 non-beta-eliminated	SRR031693_4	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	S19 2-4day pupae #1	V009 CMEL1	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	S28 0-2d pupae	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	V083 male, one day	V076 ML-DmBG3-C2	SRR014275 Ovary_rep1 LK_P	V082 embryo 14-24hr	SRR001338 IR non-beta-eliminated	V033 CMEW1 Cl.8+ cell	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	GSM379065 Zuc Heterozygote	V008 S2-DRSC	GSM379064 Vasa Mutant	V026 1182-4H cell	S31 s2+48 #1	SRR014277 Ovary_rep1 NA_P	V075 ML-DmBG1-C1	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	V084 female, one day	GSM379057 Krimp Mutant	V010 MLDmD20c5	V024 kc167 cell	S22 female head #1	GSM379063 Vasa Heterozygote	V028 CMEW1 Cl.8+ cell	SRR029030 dcr-2 knockdown	GSM280083 dcr-2-/- ovaries (18-29nt)	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	S30 s2-48 #2	GSM379060 SpnE Heterozygote	SRR001343 dcr-2 non-beta-eliminated	V067 S2-NP	V018 Kc167 cell	GSM379056 Krimp Heterozygote	SRR023400 total RNA extracted from P19 cells	S24 male body #2	S15 S2 -48 #1	S9 0-1h #3 (7)	V025 S2R+ cell	SRR029028 untreated (mock)	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	V021 ML-DmD21 cell	SRR001348 ago2 oxidized	SRR014282 Ovary_rep1 wK_P	S23 female body #2	OSS6 Drosophila OSS cell small RNA libraries, rep2	OSS8 Drosophila OSS cell small RNA libraries, rep4	OSS2 Drosophila OSS cell small RNA libraries, rep1	V020 S2R+ cell	GSM379050 Armi Heterozygote	V019 GM2 cell	SRR023402 total RNA extracted from NLS-P19 cells	SRR001344 dcr-2 beta-eliminated	S10 2-6h #1 (8)	S27 0-1d Pupae (w)	GSM379066 Zuc Mutant	S17 3rd inster #1	SRR023399 RNA bound by P19 protein	V011 Sg4	S2 female head	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	S21 disk #2	S14 0-1hr #1 (A)	OSS7 Drosophila OSS cell small RNA libraries, rep3	GSM379052 Aub Heterozygote	SRR014273 Ovary_rep1_Har_P	GSM379062 Squ Mutant	S33 KC-48 #2	GSM379054 Flam Heterozygote	S5 imaginal disc	SRR032092 mock oxidized	SRR023197 RNA Library from S2 control cells	SRR032093 ago1 knockdown	GSM424740 S2 pKF63 stably transfected	GSM379067 SpnE Mutant	GSM280088 S2cell (AGO1IP)	GSM379058	GSM343287 Drosophila Toll 10b mutant embryos	GSM379061 Squ Heterozygote	GSM280084 loqs-/- ovaries (18-29nt)	SRR001341 WT_males non-beta-eliminated	GSM379053 Aub Mutant	SRR001339 WT_females non-beta-eliminated	GSM280087 S2cell (AGO2IP)	V001 IR-	S13 6-10h #2 (11)	SRR029031 loqs-ORF knockdown	SRR032095 AGO1 IP dcr2 knockdown	S12 6-10h #1 (10)	GSM280085 WT testes (18-24nt)	SRR032094 ago2 knockdown	S16 KC -48 #1	V002 IR+	S1 male head	GSM280082 WT ovaries (18-29nt)	S35 KC+48 #2	GSM467729 WT	S8 S2-48,+48, KC-48, +48 mix	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023407 RNA bound by NLS-P19 protein	S11 2-6h #2 (9)	GSM180328 adult heads (female heads, male heads)	GSM379059	S3 male body	S34 KC+48 #1	SRR032096 AGO2 IP dcr2 knockdown	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	SRR010953 Aub heterozygotes, oxidized	S4 female body	S7 12-24hr embryo	SRR029032 r2d2 knockdown	SRR010959 Ago3 IP in heterozygotes	S18 3rd inster #2	SRR010954 Aub trans-heterozygotes, oxidized	GSM379055 Flam Mutant	GSM467730 r2d2	SRR029033 lacZ knockdown	GSM180335 imaginal discs	GSM180334 larvae: 1st instar and 3rd instars	GSM180337 tissue culture cells (S2 only)	SRR010952 Ago3 trans-heterozygotes, oxidized	SRR029029 dcr-1 knockdown	S20 2-4day pupae#2	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	SRR010956 Piwi IP in Ago3 heterozygotes	S25 1st instar #1	SRR001346 ago2 beta-eliminated	GSM180333 late embryo (12-24)	SRR010960 wt, oxidized	SRR001337 WT_females beta-eliminated	GSM467731 loq	GSM180331 early embryo (2-6)	GSM424739 S2 parental	GSM180329 adult bodies (female bodies, male bodies)	SRR001340 IR beta-eliminated	GSM239052 S2 cells, non beta-eliminated	GSM180332 mid embryo (6-10)	GSM246084 D. melanogaster adult male heads 454	GSM180330 very early embryo (0-1)	GSM239041 fly heads, non beta-eliminated	SRR010958 Piwi IP in Ago3 trans-heterozygotes	GSM239050 fly heads, beta-eliminated	SRR010951 Ago3 heterozygotes, oxidized	GSM280086 WT ovaries (AGO2IP)	S26 1st instar #2	GSM239051 S2 cells, beta-eliminated	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	SRR001342 WT_males beta-eliminated	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM424741 S2 pKF63 transiently transfected	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	SRR010955 Aub IP in Ago3 heterozygotes