Page generated on Fri Oct 15 12:01:13 2010

dme-mir-11



dme-mir-11

View dme-mir-11 on miRBase

miRNA	Length	Perfect(sense)	Perfect(antisense)	5' moR	5'arm	Loop	3'arm	3' moR	Other	Loop Size	Mature	Star
dme-mir-11	124	3526768	4	349	18682		3507705	18	18	17	3507705	18682

GATGCATTTAGATCTATGTGAGGCGCACTTGTCAAGAACTTTCTCTGTGACCCGCGTGTACTTAAAAGCCGCATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCCTCGAAGCAACATTAAGCG
........................(((((((.(((((((((...((((((...(((.((........))))).))))))...))))))))).))))))).........................-32.60
...((((........))))((((((((((((.(((((((((...((((((...(((.((........))))).))))))...))))))))).))))))))....))))...((........)).-42.70
Sense strand

	Size	Blast	Total	V076 ML-DmBG3-C2	V098 dcr-2[L811fsX] ovary	V082 embryo 14-24hr	V088 r2d2[1] ovary total RNA	V097 CS ovary	V065 dcr-2[L811fsX], ovary, AGO1IP	V064 ago2[414], ovary, AGO1IP	V024 kc167 cell	V026 1182-4H cell	V008 S2-DRSC	V021 ML-DmD21 cell	V067 S2-NP	V018 Kc167 cell	V011 Sg4	V020 S2R+ cell	SRR032095 AGO1 IP dcr2 knockdown	V063 CS,ovary,AGO1IP	GSM379065 Zuc Heterozygote	SRR029028 untreated (mock)	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	V025 S2R+ cell	V066 r2d2[1], ovary, AGO1IP	GSM379057 Krimp Mutant	V081 embryo 2-6hr	V033 CMEW1 Cl.8+ cell	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	V010 MLDmD20c5	V089 ago2[414] ovary total RNA	V019 GM2 cell	V090 CS  male total RNA	SRR029633 total small RNAs from hen1 homozygous flies	V009 CMEL1	V083 male, one day	SRR014275 Ovary_rep1 LK_P	S32 s2+48 #2	GSM379064 Vasa Mutant	SRR014277 Ovary_rep1 NA_P	SRR014280 Ovary_rep1 w1118_P	V028 CMEW1 Cl.8+ cell	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	S33 KC-48 #2	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	GSM280088 S2cell (AGO1IP)	SRR001345 ago2 non-beta-eliminated	S31 s2+48 #1	GSM379056 Krimp Heterozygote	SRR014282 Ovary_rep1 wK_P	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	SRR031696_2152	SRR031692 Total small RNAs from Oregon R	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	GSM379063 Vasa Heterozygote	V084 female, one day	S30 s2-48 #2	SRR029030 dcr-2 knockdown	GSM379061 Squ Heterozygote	SRR029032 r2d2 knockdown	SRR014273 Ovary_rep1_Har_P	GSM424740 S2 pKF63 stably transfected	V001 IR-	SRR029031 loqs-ORF knockdown	SRR029033 lacZ knockdown	SRR032094 ago2 knockdown	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	SRR031703 Total small RNAs from r2d2 homozygous flies	S15 S2 -48 #1	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	OSS6 Drosophila OSS cell small RNA libraries, rep2	OSS8 Drosophila OSS cell small RNA libraries, rep4	SRR001338 IR non-beta-eliminated	GSM379051 Armi Mutant	V075 ML-DmBG1-C1	S29 male head #1	OSS2 Drosophila OSS cell small RNA libraries, rep1	SRR031699 Total small RNAs from dcr-2 homozygous flies	GSM424739 S2 parental	S24 male body #2	V002 IR+	SRR032093 ago1 knockdown	GSM379052 Aub Heterozygote	GSM379066 Zuc Mutant	SRR029029 dcr-1 knockdown	SRR031701 Total small RNAs from r2d2 heterozygous flies	GSM379058	GSM379060 SpnE Heterozygote	OSS7 Drosophila OSS cell small RNA libraries, rep3	GSM379054 Flam Heterozygote	S16 KC -48 #1	S28 0-2d pupae	GSM280085 WT testes (18-24nt)	GSM379050 Armi Heterozygote	GSM467729 WT	S27 0-1d Pupae (w)	GSM467730 r2d2	S13 6-10h #2 (11)	S35 KC+48 #2	SRR001343 dcr-2 non-beta-eliminated	S19 2-4day pupae #1	GSM379067 SpnE Mutant	SRR001349 heterozygous dcr-2_untreated	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	GSM379062 Squ Mutant	S23 female body #2	GSM379053 Aub Mutant	S12 6-10h #1 (10)	SRR001344 dcr-2 beta-eliminated	SRR032092 mock oxidized	SRR001664 homozygous dcr-2_untreated	S34 KC+48 #1	S10 2-6h #1 (8)	S9 0-1h #3 (7)	GSM379055 Flam Mutant	SRR001347 ago2 untreated	GSM379059	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	SRR031693_4	GSM280082 WT ovaries (18-29nt)	S22 female head #1	S8 S2-48,+48, KC-48, +48 mix	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	S14 0-1hr #1 (A)	GSM280083 dcr-2-/- ovaries (18-29nt)	SRR010959 Ago3 IP in heterozygotes	S17 3rd inster #1	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	S21 disk #2	S5 imaginal disc	S2 female head	S18 3rd inster #2	GSM424741 S2 pKF63 transiently transfected	S7 12-24hr embryo	SRR010954 Aub trans-heterozygotes, oxidized	GSM280084 loqs-/- ovaries (18-29nt)	GSM343287 Drosophila Toll 10b mutant embryos	S4 female body	GSM467731 loq	S11 2-6h #2 (9)	SRR010953 Aub heterozygotes, oxidized	SRR023400 total RNA extracted from P19 cells	S20 2-4day pupae#2	SRR010955 Aub IP in Ago3 heterozygotes	SRR032096 AGO2 IP dcr2 knockdown	GSM280087 S2cell (AGO2IP)	SRR010958 Piwi IP in Ago3 trans-heterozygotes	GSM180337 tissue culture cells (S2 only)	S1 male head	SRR001337 WT_females beta-eliminated	S3 male body	SRR001348 ago2 oxidized	SRR023399 RNA bound by P19 protein	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	SRR010956 Piwi IP in Ago3 heterozygotes	S25 1st instar #1	SRR023197 RNA Library from S2 control cells	SRR001346 ago2 beta-eliminated	GSM239041 fly heads, non beta-eliminated	GSM180328 adult heads (female heads, male heads)	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	GSM180333 late embryo (12-24)	GSM180329 adult bodies (female bodies, male bodies)	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023407 RNA bound by NLS-P19 protein	GSM239052 S2 cells, non beta-eliminated	GSM180332 mid embryo (6-10)	GSM180335 imaginal discs	GSM180331 early embryo (2-6)	S26 1st instar #2	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	GSM180334 larvae: 1st instar and 3rd instars	SRR010960 wt, oxidized	SRR023402 total RNA extracted from NLS-P19 cells	SRR010952 Ago3 trans-heterozygotes, oxidized	GSM180330 very early embryo (0-1)	SRR001340 IR beta-eliminated	GSM239050 fly heads, beta-eliminated	SRR010951 Ago3 heterozygotes, oxidized	GSM239051 S2 cells, beta-eliminated	SRR001342 WT_males beta-eliminated	GSM246084 D. melanogaster adult male heads 454	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM280086 WT ovaries (AGO2IP)	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries
....CATTTAGATCTATGTGAGGCG...................................................................................................	21	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....CATTTAGATCTATGTGAGGCGC..................................................................................................	22	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....ATTTAGATCTATGTGAGGCGCACTTGT............................................................................................	27	1	4	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......TTTAGATCTATGTGAGGCGCA.................................................................................................	21	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......TTAGATCTATGTGAGGCGCACTTGT............................................................................................	25	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......TTAGATCTATGTGAGGCGC..................................................................................................	19	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........TAGATCTATGTGAGGCGCACTTG.............................................................................................	23	1	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........TAGATCTATGTGAGGCGCACTTGT............................................................................................	24	1	6	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........AGATCTATGTGAGGCGCACTTGT............................................................................................	23	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GATCTATGTGAGGCGCACTTGT............................................................................................	22	1	4	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........ATCTATGTGAGGCGCACTTGT............................................................................................	21	1	7	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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......................................................................GCATCACAGTCTGAGTTCTTGC................................	22	1	29	1	0	0	0	0	1	0	1	2	0	1	1	0	11	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................GCATCACAGTCTGAGTTCTTG.................................	21	1	7	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................GCATCACAGTCTGAGTTCTTGCT...............................	23	1	28	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	1	0	0	0	0	1	1	11	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................GCATCACAGTCTGAGTTCT...................................	19	1	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................CATCACAGTCTGAGTTCTTGCTGA.............................	24	1	91	0	2	0	1	1	2	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	3	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	42	0	19	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................CATCACAGTCTGAGTTCTTGCT...............................	22	1	1911656	133490	62073	70554	49479	50099	6953	11953	40922	38060	38375	30849	23642	32938	30266	41244	9032	6312	35576	31155	30705	28290	30287	8770	30031	23681	26348	27242	21632	24243	19817	15535	26323	17151	23677	23066	31292	20685	21617	19294	18210	21799	25898	13946	6081	23989	22428	16249	12594	9837	6628	17781	7147	12526	13897	15295	9768	13416	9141	10445	13491	13644	6310	10532	9247	4545	3688	12501	11009	4371	11489	11236	9458	8799	8540	10305	10027	9043	1575	10267	9599	7401	4703	4832	5403	3263	4243	4243	7800	4510	7644	8216	3933	3935	6464	7223	6397	6511	6210	5026	6225	3320	5004	2021	2941	4596	3131	5143	4298	4795	3679	4336	3927	3500	1928	2926	1801	2955	2955	3064	1739	1683	2599	2389	2085	913	2246	2141	843	1818	1924	1722	1572	660	1441	52	680	4	979	1077	878	42	150	890	844	184	483	751	714	676	701	672	513	120	599	622	625	80	429	114	317	85	394	267	46	46	60	270	219	223	240	231	208	39	11	41	99	89	67	23	19	39	28	26	1	2	1	0	0	0
.......................................................................CATCACAGTCTGAGTTCTTGC................................	21	1	1288676	84223	45500	22507	37481	24088	62713	53927	23380	25506	21493	26275	26665	21816	25863	13457	31195	41488	17557	17655	15963	19028	14933	34630	13519	18283	12863	13326	17513	14369	17905	17405	7464	18780	10576	11026	3888	11991	9990	12975	12021	8576	3437	14193	17969	4315	4049	8961	11745	13451	14279	3351	12869	7759	5933	3763	7182	4604	6498	6044	3486	3159	5241	4978	5537	10463	8599	2489	2689	9765	2895	2724	3242	4535	4245	2757	2551	2659	9554	2480	2537	2802	5715	5440	3913	5184	5469	5376	2076	4058	1320	894	4127	4116	1739	847	1126	396	689	1734	646	3112	1179	4089	3140	1693	2185	282	1037	477	928	620	385	1013	1846	876	1615	608	608	364	1227	1297	424	373	730	1530	407	247	1088	414	290	418	228	1055	94	142	681	1	315	168	272	130	768	92	116	521	329	175	184	215	133	169	187	642	101	120	46	419	79	383	145	282	23	60	248	248	231	23	47	31	26	29	28	127	113	76	28	23	35	47	46	7	9	6	1	1	2	0	0	0
.......................................................................CATCACAGTCTGAGTTCTTGCTGAGT...........................	26	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................CATCACAGTCTGAGTTCTTGCTGAGTGCGAAATCC..................	35	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................CATCACAGTCTGAGTTCTTGCTGAG............................	25	1	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.......................................................................CATCACAGTCTGAGTTCTTGCTG..............................	23	1	1123	22	27	6	16	22	48	48	6	1	4	2	11	5	3	2	15	36	2	20	2	18	2	29	4	14	3	7	3	15	2	14	34	4	4	4	10	3	5	7	0	4	0	4	9	6	6	1	3	26	89	13	15	1	3	5	0	3	8	3	0	4	3	5	0	24	27	3	10	9	9	7	8	0	2	15	2	8	0	2	2	4	4	2	3	19	3	3	3	3	0	0	0	1	122	0	51	5	1	0	0	1	2	3	1	0	2	6	2	13	3	6	0	4	0	1	0	3	3	0	0	1	2	1	1	0	0	0	2	0	0	1	0	0	1	1	0	0	0	13	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................CATCACAGTCTGAGTTCTT..................................	19	1	17119	2396	435	61	49	137	233	226	581	277	419	115	275	297	54	177	1743	258	14	511	133	47	188	106	21	100	208	38	79	36	296	313	567	76	147	59	72	36	34	19	117	27	30	20	553	7	23	49	23	45	354	131	58	15	94	24	276	8	245	37	0	28	542	165	188	26	378	29	104	6	68	74	128	10	101	54	58	87	0	24	19	123	21	10	130	237	10	13	75	5	12	5	58	13	39	2	20	6	17	29	2	10	62	12	7	10	4	0	4	29	48	1	0	1	8	40	29	16	16	10	12	24	2	16	1	18	3	5	21	2	1	5	0	0	0	366	2	3	0	8	0	303	2	0	0	30	19	0	0	1	4	2	39	0	11	0	0	1	0	2	0	2	0	0	3	3	0	0	0	0	0	0	0	10	0	3	0	2	0	1	0	0	0	0	0	0	0	0	0	0
.......................................................................CATCACAGTCTGAGTTCT...................................	18	1	2729	39	3	12	0	4	3	3	26	13	5	4	8	10	1	11	252	3	0	10	8	0	7	1	0	6	24	4	2	0	26	9	114	2	15	8	18	0	5	0	11	4	10	0	3	0	8	1	0	4	95	15	0	3	7	3	23	0	8	4	0	6	35	12	23	0	13	8	15	0	20	21	8	0	6	3	20	5	0	5	5	9	1	1	32	26	0	2	16	0	5	4	4	0	6	3	10	0	0	0	4	0	6	2	0	0	0	0	3	0	1	0	0	0	0	3	1	0	0	5	4	2	1	5	1	7	2	0	3	0	1	0	0	0	0	828	0	0	2	1	1	554	3	0	0	13	0	0	0	0	0	0	42	0	20	0	0	2	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	15	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................CATCACAGTCTGAGTTCTTGCTGAGTGCGAA......................	31	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................CATCACAGTCTGAGTTCTTGCTGAGTGC.........................	28	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................ATCACAGTCTGAGTTCTTGCTGA.............................	23	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................ATCACAGTCTGAGTTCTTGCT...............................	21	1	40236	1186	2893	597	1363	2320	243	613	956	908	495	594	2094	674	246	1014	778	452	635	697	774	976	868	422	514	270	634	656	212	602	326	342	342	158	302	543	126	386	620	557	476	793	87	418	374	230	97	281	231	194	144	224	207	578	191	113	221	530	278	336	67	318	253	306	214	166	76	68	136	142	75	72	115	355	44	18	61	151	131	23	204	184	161	159	117	49	137	144	79	193	22	18	1	151	8	19	11	8	8	56	14	118	26	59	99	12	133	9	47	115	23	5	13	5	58	25	83	33	33	51	65	10	6	27	3	30	12	6	16	7	3	0	4	0	0	0	16	1	1	3	5	0	1	2	8	48	29	1	4	1	10	1	3	0	9	10	3	0	2	0	1	6	1	3	0	0	0	1	0	1	1	0	0	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0
........................................................................ATCACAGTCTGAGTTCTTG.................................	19	1	3283	192	463	24	54	186	98	125	41	36	22	23	101	40	9	22	221	119	12	38	46	23	18	57	21	35	43	12	10	39	15	71	42	9	31	22	2	13	25	15	23	20	0	15	75	4	0	10	8	22	40	14	46	32	17	0	28	11	10	25	0	6	100	16	19	22	24	0	22	11	2	4	9	11	5	0	1	20	0	0	5	12	18	10	13	25	12	15	5	13	0	0	0	12	0	0	0	0	0	0	0	8	4	4	7	0	5	0	0	0	1	0	0	1	6	5	11	1	1	3	6	0	0	4	0	7	0	0	4	0	0	0	0	0	0	0	2	3	0	0	0	0	0	1	0	5	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................ATCACAGTCTGAGTTCTTGC................................	20	1	22619	755	1174	214	735	626	1104	1198	337	417	258	318	515	283	230	208	355	721	378	314	382	520	286	590	290	185	221	337	177	267	214	319	84	155	120	257	9	247	246	308	270	333	1	359	465	34	6	165	244	346	189	36	363	295	70	15	114	160	75	166	0	41	109	120	73	355	113	3	52	264	20	13	41	160	44	3	15	38	0	0	41	37	183	179	122	75	160	177	26	145	3	0	0	140	2	0	0	0	2	14	0	104	4	131	92	1	83	0	7	0	9	0	0	0	65	12	71	7	7	4	52	4	0	2	1	57	1	0	14	1	1	0	0	0	0	2	10	15	1	0	0	1	1	0	0	5	8	2	0	0	1	1	0	0	1	0	0	2	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................ATCACAGTCTGAGTTCTT..................................	18	1	275	20	21	2	3	2	6	5	8	1	3	1	4	5	0	4	51	8	0	0	3	0	5	2	1	0	4	3	1	0	4	5	2	0	1	0	1	1	0	4	2	0	0	1	3	1	0	0	0	2	4	2	0	1	2	0	3	1	0	1	0	1	23	0	6	0	4	0	2	0	0	0	2	0	0	0	2	2	0	0	0	3	1	0	0	2	1	0	0	2	0	0	0	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	6	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................ATCACAGTCTGAGTTCTTGCTG..............................	22	1	23	0	3	1	0	2	3	2	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	1	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................TCACAGTCTGAGTTCTTGC................................	19	1	188	1	1	2	7	0	4	10	2	5	1	3	4	2	4	1	3	18	2	16	0	4	2	2	0	0	3	0	0	0	3	1	3	2	0	0	2	1	0	5	1	0	0	3	2	0	1	0	1	0	6	2	0	0	1	0	0	0	4	0	0	1	0	8	10	0	2	5	1	0	1	0	0	0	0	0	0	2	0	0	0	0	0	2	6	2	0	0	0	0	0	0	0	0	1	1	0	0	1	0	1	0	0	1	0	2	0	0	0	0	3	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................TCACAGTCTGAGTTCTTGCT...............................	20	1	988	11	4	3	10	2	24	33	7	8	17	7	52	8	6	15	62	178	4	42	2	1	4	20	4	4	5	3	3	0	2	7	9	2	1	0	36	6	1	4	4	2	10	0	7	2	23	1	1	1	22	15	5	1	0	12	34	0	1	1	0	10	5	28	1	0	1	21	5	1	4	2	1	1	1	5	3	3	33	3	7	21	0	0	0	0	0	1	1	1	4	3	0	2	2	4	2	1	1	1	8	2	1	2	1	4	1	0	1	0	0	3	4	0	0	0	0	0	0	0	0	3	3	1	0	2	3	2	2	0	1	0	1	0	3	0	1	0	1	0	0	1	0	0	0	3	0	1	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................TCACAGTCTGAGTTCTTG.................................	18	1	54	2	0	0	0	1	1	1	0	0	0	0	0	0	0	0	8	2	0	7	0	0	0	1	0	0	0	0	1	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	5	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	1	0	0	2	0	0	0	3	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................CACAGTCTGAGTTCTTGC................................	18	1	284	15	3	2	6	1	14	7	3	4	1	4	3	6	1	1	19	14	0	10	10	2	3	8	0	2	3	5	1	0	1	2	2	0	0	1	0	0	2	0	1	3	0	2	0	0	5	1	2	2	5	1	2	1	1	0	28	1	0	3	0	3	1	4	0	0	4	1	5	6	3	2	0	0	1	0	3	4	0	1	0	2	5	1	11	0	0	2	0	0	0	0	0	1	0	1	0	0	0	0	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................CACAGTCTGAGTTCTTGCT...............................	19	1	467	10	5	6	7	3	6	9	5	3	2	4	1	2	4	8	10	47	0	29	6	0	6	6	2	3	4	7	0	0	2	1	10	3	3	12	14	3	6	0	1	4	15	0	0	6	7	0	0	1	4	15	3	3	1	1	4	1	0	2	0	4	0	0	11	0	1	1	18	0	12	12	1	1	0	3	4	17	0	4	3	10	0	0	4	0	1	1	4	2	0	4	1	0	1	1	0	6	0	0	2	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	4	1	1	1	3	0	0	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................CACAGTCTGAGTTCTTGCTG..............................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................ACAGTCTGAGTTCTTGCTGAGT...........................	22	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................ACAGTCTGAGTTCTTGCTG..............................	19	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................ACAGTCTGAGTTCTTGCT...............................	18	1	3483	97	102	67	24	87	12	41	47	56	36	34	85	33	14	64	46	67	57	65	102	54	48	17	64	28	39	107	15	12	30	9	58	25	23	65	3	40	77	46	28	61	0	25	17	30	7	36	15	40	21	43	24	62	16	0	10	49	9	39	0	26	9	16	24	10	6	2	40	7	168	57	11	29	2	0	168	33	0	1	19	9	16	13	20	6	21	21	121	14	0	3	0	11	4	3	2	0	1	5	4	16	3	9	13	0	5	0	4	0	4	0	0	1	5	2	8	2	2	6	12	0	2	7	0	11	15	0	3	0	0	0	1	0	0	0	0	0	0	0	0	0	4	1	3	4	0	1	0	0	1	0	0	0	5	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................TTCTTGCTGAGTGCGAAAT....................	19	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................GAGTGCGAAATCCTCGAAGCAACAT......	25	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................GAGTGCGAAATCCTCGAAGCAA.........	22	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................GAGTGCGAAATCCTCGAAG............	19	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................GAGTGCGAAATCCTCGAA.............	18	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................GAGTGCGAAATCCTCGAAGCAACA.......	24	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................AATCCTCGAAGCAACATTAAG..	21	1	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Antisense strand

	Size	Blast	Total	V076 ML-DmBG3-C2	V098 dcr-2[L811fsX] ovary	V082 embryo 14-24hr	V088 r2d2[1] ovary total RNA	V097 CS ovary	V065 dcr-2[L811fsX], ovary, AGO1IP	V064 ago2[414], ovary, AGO1IP	V024 kc167 cell	V026 1182-4H cell	V008 S2-DRSC	V021 ML-DmD21 cell	V067 S2-NP	V018 Kc167 cell	V011 Sg4	V020 S2R+ cell	SRR032095 AGO1 IP dcr2 knockdown	V063 CS,ovary,AGO1IP	GSM379065 Zuc Heterozygote	SRR029028 untreated (mock)	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	V025 S2R+ cell	V066 r2d2[1], ovary, AGO1IP	GSM379057 Krimp Mutant	V081 embryo 2-6hr	V033 CMEW1 Cl.8+ cell	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	V010 MLDmD20c5	V089 ago2[414] ovary total RNA	V019 GM2 cell	V090 CS  male total RNA	SRR029633 total small RNAs from hen1 homozygous flies	V009 CMEL1	V083 male, one day	SRR014275 Ovary_rep1 LK_P	S32 s2+48 #2	GSM379064 Vasa Mutant	SRR014277 Ovary_rep1 NA_P	SRR014280 Ovary_rep1 w1118_P	V028 CMEW1 Cl.8+ cell	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	S33 KC-48 #2	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	GSM280088 S2cell (AGO1IP)	SRR001345 ago2 non-beta-eliminated	S31 s2+48 #1	GSM379056 Krimp Heterozygote	SRR014282 Ovary_rep1 wK_P	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	SRR031696_2152	SRR031692 Total small RNAs from Oregon R	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	GSM379063 Vasa Heterozygote	V084 female, one day	S30 s2-48 #2	SRR029030 dcr-2 knockdown	GSM379061 Squ Heterozygote	SRR029032 r2d2 knockdown	SRR014273 Ovary_rep1_Har_P	GSM424740 S2 pKF63 stably transfected	V001 IR-	SRR029031 loqs-ORF knockdown	SRR029033 lacZ knockdown	SRR032094 ago2 knockdown	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	SRR031703 Total small RNAs from r2d2 homozygous flies	S15 S2 -48 #1	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	OSS6 Drosophila OSS cell small RNA libraries, rep2	OSS8 Drosophila OSS cell small RNA libraries, rep4	SRR001338 IR non-beta-eliminated	GSM379051 Armi Mutant	V075 ML-DmBG1-C1	S29 male head #1	OSS2 Drosophila OSS cell small RNA libraries, rep1	SRR031699 Total small RNAs from dcr-2 homozygous flies	GSM424739 S2 parental	S24 male body #2	V002 IR+	SRR032093 ago1 knockdown	GSM379052 Aub Heterozygote	GSM379066 Zuc Mutant	SRR029029 dcr-1 knockdown	SRR031701 Total small RNAs from r2d2 heterozygous flies	GSM379058	GSM379060 SpnE Heterozygote	OSS7 Drosophila OSS cell small RNA libraries, rep3	GSM379054 Flam Heterozygote	S16 KC -48 #1	S28 0-2d pupae	GSM280085 WT testes (18-24nt)	GSM379050 Armi Heterozygote	GSM467729 WT	S27 0-1d Pupae (w)	GSM467730 r2d2	S13 6-10h #2 (11)	S35 KC+48 #2	SRR001343 dcr-2 non-beta-eliminated	S19 2-4day pupae #1	GSM379067 SpnE Mutant	SRR001349 heterozygous dcr-2_untreated	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	GSM379062 Squ Mutant	S23 female body #2	GSM379053 Aub Mutant	S12 6-10h #1 (10)	SRR001344 dcr-2 beta-eliminated	SRR032092 mock oxidized	SRR001664 homozygous dcr-2_untreated	S34 KC+48 #1	S10 2-6h #1 (8)	S9 0-1h #3 (7)	GSM379055 Flam Mutant	SRR001347 ago2 untreated	GSM379059	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	SRR031693_4	GSM280082 WT ovaries (18-29nt)	S22 female head #1	S8 S2-48,+48, KC-48, +48 mix	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	S14 0-1hr #1 (A)	GSM280083 dcr-2-/- ovaries (18-29nt)	SRR010959 Ago3 IP in heterozygotes	S17 3rd inster #1	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	S21 disk #2	S5 imaginal disc	S2 female head	S18 3rd inster #2	GSM424741 S2 pKF63 transiently transfected	S7 12-24hr embryo	SRR010954 Aub trans-heterozygotes, oxidized	GSM280084 loqs-/- ovaries (18-29nt)	GSM343287 Drosophila Toll 10b mutant embryos	S4 female body	GSM467731 loq	S11 2-6h #2 (9)	SRR010953 Aub heterozygotes, oxidized	SRR023400 total RNA extracted from P19 cells	S20 2-4day pupae#2	SRR010955 Aub IP in Ago3 heterozygotes	SRR032096 AGO2 IP dcr2 knockdown	GSM280087 S2cell (AGO2IP)	SRR010958 Piwi IP in Ago3 trans-heterozygotes	GSM180337 tissue culture cells (S2 only)	S1 male head	SRR001337 WT_females beta-eliminated	S3 male body	SRR001348 ago2 oxidized	SRR023399 RNA bound by P19 protein	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	SRR010956 Piwi IP in Ago3 heterozygotes	S25 1st instar #1	SRR023197 RNA Library from S2 control cells	SRR001346 ago2 beta-eliminated	GSM239041 fly heads, non beta-eliminated	GSM180328 adult heads (female heads, male heads)	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	GSM180333 late embryo (12-24)	GSM180329 adult bodies (female bodies, male bodies)	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023407 RNA bound by NLS-P19 protein	GSM239052 S2 cells, non beta-eliminated	GSM180332 mid embryo (6-10)	GSM180335 imaginal discs	GSM180331 early embryo (2-6)	S26 1st instar #2	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	GSM180334 larvae: 1st instar and 3rd instars	SRR010960 wt, oxidized	SRR023402 total RNA extracted from NLS-P19 cells	SRR010952 Ago3 trans-heterozygotes, oxidized	GSM180330 very early embryo (0-1)	SRR001340 IR beta-eliminated	GSM239050 fly heads, beta-eliminated	SRR010951 Ago3 heterozygotes, oxidized	GSM239051 S2 cells, beta-eliminated	SRR001342 WT_males beta-eliminated	GSM246084 D. melanogaster adult male heads 454	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM280086 WT ovaries (AGO2IP)	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries
GATGCATTTAGATCTATGTGA.......................................................................................................	21	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GATCTATGTGAGGCGCACTTGTCA..........................................................................................	24	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0