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dme-mir-124



dme-mir-124

View dme-mir-124 on miRBase

miRNA	Length	Perfect(sense)	Perfect(antisense)	5' moR	5'arm	Loop	3'arm	3' moR	Other	Loop Size	Mature	Star
dme-mir-124	149	800800	4	1	11413		789379		11	11	789379	11413

CGACATAAAGCCCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACCCAATAATAGACAGA
...................................(((((..(((.((((((.((((((..((((.((((.........))))))))..)))))).)))))).))).))))).....................................-31.30
.(((.......(((((((.(....).)))))))..(((((..(((.((((((.((((((..((((.((((.........))))))))..)))))).)))))).))).)))))..)))................................-39.30
Sense strand

	Size	Blast	Total	S29 male head #1	S22 female head #1	S13 6-10h #2 (11)	S12 6-10h #1 (10)	SRR031696_2152	S21 disk #2	S5 imaginal disc	SRR029633 total small RNAs from hen1 homozygous flies	S28 0-2d pupae	V082 embryo 14-24hr	S2 female head	SRR031699 Total small RNAs from dcr-2 homozygous flies	S7 12-24hr embryo	SRR001338 IR non-beta-eliminated	SRR031697 Total small RNAs from dcr-2 heterozygous flies	S1 male head	SRR031692 Total small RNAs from Oregon R	V002 IR+	S19 2-4day pupae #1	S27 0-1d Pupae (w)	V001 IR-	S24 male body #2	SRR001347 ago2 untreated	SRR001664 homozygous dcr-2_untreated	SRR031701 Total small RNAs from r2d2 heterozygous flies	SRR031703 Total small RNAs from r2d2 homozygous flies	V090 CS  male total RNA	S9 0-1h #3 (7)	S10 2-6h #1 (8)	GSM180328 adult heads (female heads, male heads)	SRR001343 dcr-2 non-beta-eliminated	SRR001349 heterozygous dcr-2_untreated	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	V081 embryo 2-6hr	GSM467729 WT	GSM180333 late embryo (12-24)	V083 male, one day	S26 1st instar #2	S25 1st instar #1	S23 female body #2	GSM239041 fly heads, non beta-eliminated	SRR001345 ago2 non-beta-eliminated	GSM180335 imaginal discs	S17 3rd inster #1	GSM467730 r2d2	GSM180332 mid embryo (6-10)	S32 s2+48 #2	S18 3rd inster #2	V084 female, one day	S20 2-4day pupae#2	S11 2-6h #2 (9)	S3 male body	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	GSM239052 S2 cells, non beta-eliminated	SRR001348 ago2 oxidized	S35 KC+48 #2	S4 female body	GSM246084 D. melanogaster adult male heads 454	S34 KC+48 #1	SRR001344 dcr-2 beta-eliminated	GSM467731 loq	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	V008 S2-DRSC	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	GSM180334 larvae: 1st instar and 3rd instars	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	GSM180331 early embryo (2-6)	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	SRR031693_4	S14 0-1hr #1 (A)	S33 KC-48 #2	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	GSM180329 adult bodies (female bodies, male bodies)	SRR001337 WT_females beta-eliminated	GSM280085 WT testes (18-24nt)	S30 s2-48 #2	GSM343287 Drosophila Toll 10b mutant embryos	S8 S2-48,+48, KC-48, +48 mix	V076 ML-DmBG3-C2	GSM280087 S2cell (AGO2IP)	SRR001346 ago2 beta-eliminated	GSM239050 fly heads, beta-eliminated	S16 KC -48 #1	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	V011 Sg4	SRR001340 IR beta-eliminated	GSM180330 very early embryo (0-1)	SRR001342 WT_males beta-eliminated	SRR029032 r2d2 knockdown	S31 s2+48 #1	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	SRR032092 mock oxidized	SRR032094 ago2 knockdown	SRR029033 lacZ knockdown	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	V063 CS,ovary,AGO1IP	SRR029030 dcr-2 knockdown	V098 dcr-2[L811fsX] ovary	GSM379060 SpnE Heterozygote	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	GSM280084 loqs-/- ovaries (18-29nt)	SRR029029 dcr-1 knockdown	S15 S2 -48 #1	V009 CMEL1	V019 GM2 cell	SRR014280 Ovary_rep1 w1118_P	V088 r2d2[1] ovary total RNA	V089 ago2[414] ovary total RNA	GSM280088 S2cell (AGO1IP)	V097 CS ovary	V066 r2d2[1], ovary, AGO1IP	GSM379064 Vasa Mutant	V026 1182-4H cell	GSM379067 SpnE Mutant	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	OSS8 Drosophila OSS cell small RNA libraries, rep4	GSM379056 Krimp Heterozygote	V010 MLDmD20c5	V028 CMEW1 Cl.8+ cell	OSS7 Drosophila OSS cell small RNA libraries, rep3	OSS6 Drosophila OSS cell small RNA libraries, rep2	GSM379059	SRR032093 ago1 knockdown	GSM379057 Krimp Mutant	V064 ago2[414], ovary, AGO1IP	SRR014282 Ovary_rep1 wK_P	GSM239051 S2 cells, beta-eliminated	V065 dcr-2[L811fsX], ovary, AGO1IP	OSS2 Drosophila OSS cell small RNA libraries, rep1	GSM379051 Armi Mutant	V075 ML-DmBG1-C1	GSM379062 Squ Mutant	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	SRR029031 loqs-ORF knockdown	GSM379050 Armi Heterozygote	SRR023197 RNA Library from S2 control cells	GSM379063 Vasa Heterozygote	V020 S2R+ cell	SRR023402 total RNA extracted from NLS-P19 cells	GSM379052 Aub Heterozygote	SRR014275 Ovary_rep1 LK_P	SRR014273 Ovary_rep1_Har_P	SRR032095 AGO1 IP dcr2 knockdown	SRR014277 Ovary_rep1 NA_P	V021 ML-DmD21 cell	SRR010958 Piwi IP in Ago3 trans-heterozygotes	GSM280082 WT ovaries (18-29nt)	GSM280083 dcr-2-/- ovaries (18-29nt)	V024 kc167 cell	GSM379066 Zuc Mutant	GSM379058	GSM280086 WT ovaries (AGO2IP)	V018 Kc167 cell	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	GSM379065 Zuc Heterozygote	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR010952 Ago3 trans-heterozygotes, oxidized	SRR010956 Piwi IP in Ago3 heterozygotes	GSM424740 S2 pKF63 stably transfected	SRR010954 Aub trans-heterozygotes, oxidized	SRR023400 total RNA extracted from P19 cells	SRR023407 RNA bound by NLS-P19 protein	GSM180337 tissue culture cells (S2 only)	SRR010960 wt, oxidized	GSM379054 Flam Heterozygote	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM379053 Aub Mutant	GSM379055 Flam Mutant	SRR010959 Ago3 IP in heterozygotes	GSM424741 S2 pKF63 transiently transfected	SRR032096 AGO2 IP dcr2 knockdown	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	V025 S2R+ cell	GSM379061 Squ Heterozygote	V067 S2-NP	SRR023399 RNA bound by P19 protein	SRR010955 Aub IP in Ago3 heterozygotes	GSM424739 S2 parental	SRR029028 untreated (mock)	V033 CMEW1 Cl.8+ cell	SRR010951 Ago3 heterozygotes, oxidized	SRR010953 Aub heterozygotes, oxidized
...........................................TCCTGGTATCCACTGTAGGCCT....................................................................................	22	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................CCTGGTATCCACTGTAGGCCTA...................................................................................	22	1	4	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................CCTGGTATCCACTGTAGGCCT....................................................................................	21	1	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................CTGGTATCCACTGTAGGCCTATATG...............................................................................	25	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................CTGGTATCCACTGTAGGCCT....................................................................................	20	1	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................CTGGTATCCACTGTAGGCCTAT..................................................................................	22	1	4	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................CTGGTATCCACTGTAGGCCTA...................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................TGGTATCCACTGTAGGCCTATAT................................................................................	23	1	106	4	3	11	13	1	4	2	2	0	9	1	4	2	1	2	0	1	3	3	0	4	0	0	0	5	4	1	0	9	1	0	3	0	0	9	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................TGGTATCCACTGTAGGCC.....................................................................................	18	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................TGGTATCCACTGTAGGCCTATA.................................................................................	22	1	102	1	2	6	31	0	6	5	1	1	2	0	0	1	1	0	0	2	6	1	1	0	0	0	0	1	0	0	0	5	0	1	1	0	0	9	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	3	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	4	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................TGGTATCCACTGTAGGCCTAT..................................................................................	21	1	33	5	3	1	4	0	1	0	4	0	0	1	0	2	1	0	0	1	0	0	2	0	0	0	0	1	1	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................TGGTATCCACTGTAGGCCT....................................................................................	19	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................TGGTATCCACTGTAGGCCTA...................................................................................	20	1	18	0	0	0	0	0	0	0	2	0	0	1	0	0	1	2	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.................................................................................TAAGGCACGCGGTGAATGCC................................................	20	1	41011	4567	1215	244	123	6282	188	131	2887	177	954	414	3346	150	2210	2198	439	1182	502	61	91	417	358	897	1211	1792	1365	2125	111	15	115	844	615	146	146	69	193	35	494	15	17	76	809	152	15	11	112	5	18	20	169	4	13	19	159	110	94	30	13	8	7	61	49	79	28	189	26	2	2	56	2	8	25	1	6	0	4	15	4	7	78	3	25	44	4	22	0	2	19	15	0	0	4	1	0	2	2	6	0	2	0	5	8	1	0	0	0	1	1	0	1	0	2	0	1	0	1	0	0	0	1	2	0	0	0	0	1	0	1	0	1	1	0	0	0	0	1	0	0	0	1	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TAAGGCACGCGGTGAATGCCA...............................................	21	1	496483	137608	67143	7986	3617	17691	14199	10154	16935	11529	13041	15492	12960	6649	12093	11155	10477	10385	8734	6449	6832	6704	7493	6847	6161	4690	4535	3673	2759	383	3990	3277	3365	4051	4051	816	3117	1360	2444	1747	1403	2162	1509	1996	1071	1115	1720	262	1055	920	1093	709	172	818	544	688	663	564	608	539	476	515	503	259	159	185	189	158	159	168	20	23	83	52	165	29	136	134	121	83	13	64	61	39	62	33	24	16	33	24	7	38	28	18	10	19	17	14	16	15	0	9	6	5	8	8	3	5	2	4	2	6	4	6	4	3	3	2	2	1	2	1	3	2	0	3	2	2	0	2	0	1	1	1	0	2	0	0	1	1	0	0	0	0	1	0	0	0	0	1	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGT.................................	35	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TAAGGCACGCGGTGAATGCCAAGA............................................	24	1	1502	243	141	12	5	388	21	35	86	16	22	18	47	7	35	40	9	51	8	3	10	2	20	11	12	43	75	10	1	4	8	6	14	4	4	2	5	4	13	3	2	5	0	4	2	1	2	0	4	3	5	5	0	2	10	1	1	3	3	0	0	1	0	1	0	2	0	1	2	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TAAGGCACGCGGTGAATGCCAAGAGCGAACGC....................................	32	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TAAGGCACGCGGTGAATGC.................................................	19	1	4601	764	203	18	5	490	31	18	348	27	54	42	467	21	170	311	66	103	40	10	12	19	14	72	98	175	80	184	27	2	0	123	71	27	27	3	28	0	35	1	2	4	68	43	0	6	16	0	5	0	17	1	5	1	27	10	13	5	2	2	3	40	7	21	5	29	5	0	0	24	0	5	11	1	0	4	0	2	0	0	7	0	1	2	1	4	0	0	9	1	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................AAGGCACGCGGTGAATGCC................................................	19	1	417	9	1	0	0	71	1	0	58	1	2	0	48	0	16	47	4	26	0	0	0	0	2	4	3	41	42	2	2	0	0	11	2	2	2	0	4	0	1	0	0	0	3	5	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................AAGGCACGCGGTGAATGCCAAGA............................................	23	1	20	0	0	0	0	7	0	0	2	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	3	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................AAGGCACGCGGTGAATGCCAA..............................................	21	1	423	64	23	43	44	17	28	7	22	19	8	5	11	3	10	14	7	13	3	6	3	6	3	1	1	5	9	0	1	7	2	2	1	0	0	0	11	0	0	0	1	0	0	2	2	5	4	0	2	1	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................AAGGCACGCGGTGAATGCCA...............................................	20	1	2422	223	102	16	11	257	25	12	340	14	21	17	185	3	112	214	7	190	8	7	10	5	10	33	26	97	131	2	3	0	3	26	8	35	35	3	73	2	3	1	1	2	0	26	2	2	70	0	2	0	3	1	0	0	8	0	0	1	1	1	0	9	13	6	0	1	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................AAGGCACGCGGTGAATGCCAAG.............................................	22	1	206	39	3	6	4	51	3	3	10	1	12	2	11	0	3	9	1	12	0	0	1	2	1	0	0	11	10	0	0	1	0	0	1	0	0	3	1	0	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................AAGGCACGCGGTGAATGC.................................................	18	1	37	2	0	0	0	9	0	0	6	0	0	0	4	0	1	4	0	0	0	0	0	0	0	1	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................AGGCACGCGGTGAATGCCAAGAGC..........................................	24	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................AGGCACGCGGTGAATGCCAAGA............................................	22	1	81	17	4	4	0	18	1	1	4	0	2	2	1	0	1	2	0	5	0	0	1	0	0	0	0	9	7	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................AGGCACGCGGTGAATGCCAAG.............................................	21	1	67	19	10	0	4	6	2	1	2	0	4	2	2	0	1	1	0	2	0	0	0	0	0	0	0	0	4	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................AGGCACGCGGTGAATGCCAA..............................................	20	1	268	54	22	76	28	3	10	6	4	11	2	3	1	4	0	2	1	1	1	5	9	1	1	0	0	0	0	0	0	6	1	0	0	0	0	0	0	0	0	1	3	2	0	0	0	3	1	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................AGGCACGCGGTGAATGCCA...............................................	19	1	603	224	116	13	5	35	14	6	15	21	11	15	9	1	3	6	13	20	3	13	8	5	7	1	0	5	6	0	0	0	0	2	0	3	3	0	3	0	1	7	1	1	0	0	0	3	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................AGGCACGCGGTGAATGCCAAGAG...........................................	23	1	4	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................AGGCACGCGGTGAATGCC................................................	18	1	21	2	2	1	0	3	0	0	5	0	0	0	3	0	0	1	0	0	0	0	1	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................GGCACGCGGTGAATGCCA...............................................	18	1	92	19	17	1	0	9	2	0	3	0	0	7	2	1	1	2	1	2	1	2	3	0	5	0	0	0	0	0	1	1	0	0	1	1	1	0	0	0	0	0	2	1	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................GGCACGCGGTGAATGCCAA..............................................	19	1	44	11	1	7	0	1	2	1	0	0	1	1	0	1	0	0	0	0	0	2	1	0	7	0	0	1	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................GCACGCGGTGAATGCCAA..............................................	18	1	28	1	1	2	0	0	0	0	0	0	1	0	0	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	8	3	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................GCACGCGGTGAATGCCAAG.............................................	19	1	6	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................CACGCGGTGAATGCCAAG.............................................	18	1	3	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Antisense strand

	Size	Blast	Total	S29 male head #1	S22 female head #1	S13 6-10h #2 (11)	S12 6-10h #1 (10)	SRR031696_2152	S21 disk #2	S5 imaginal disc	SRR029633 total small RNAs from hen1 homozygous flies	S28 0-2d pupae	V082 embryo 14-24hr	S2 female head	SRR031699 Total small RNAs from dcr-2 homozygous flies	S7 12-24hr embryo	SRR001338 IR non-beta-eliminated	SRR031697 Total small RNAs from dcr-2 heterozygous flies	S1 male head	SRR031692 Total small RNAs from Oregon R	V002 IR+	S19 2-4day pupae #1	S27 0-1d Pupae (w)	V001 IR-	S24 male body #2	SRR001347 ago2 untreated	SRR001664 homozygous dcr-2_untreated	SRR031701 Total small RNAs from r2d2 heterozygous flies	SRR031703 Total small RNAs from r2d2 homozygous flies	V090 CS  male total RNA	S9 0-1h #3 (7)	S10 2-6h #1 (8)	GSM180328 adult heads (female heads, male heads)	SRR001343 dcr-2 non-beta-eliminated	SRR001349 heterozygous dcr-2_untreated	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	V081 embryo 2-6hr	GSM467729 WT	GSM180333 late embryo (12-24)	V083 male, one day	S26 1st instar #2	S25 1st instar #1	S23 female body #2	GSM239041 fly heads, non beta-eliminated	SRR001345 ago2 non-beta-eliminated	GSM180335 imaginal discs	S17 3rd inster #1	GSM467730 r2d2	GSM180332 mid embryo (6-10)	S32 s2+48 #2	S18 3rd inster #2	V084 female, one day	S20 2-4day pupae#2	S11 2-6h #2 (9)	S3 male body	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	GSM239052 S2 cells, non beta-eliminated	SRR001348 ago2 oxidized	S35 KC+48 #2	S4 female body	GSM246084 D. melanogaster adult male heads 454	S34 KC+48 #1	SRR001344 dcr-2 beta-eliminated	GSM467731 loq	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	V008 S2-DRSC	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	GSM180334 larvae: 1st instar and 3rd instars	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	GSM180331 early embryo (2-6)	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	SRR031693_4	S14 0-1hr #1 (A)	S33 KC-48 #2	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	GSM180329 adult bodies (female bodies, male bodies)	SRR001337 WT_females beta-eliminated	GSM280085 WT testes (18-24nt)	S30 s2-48 #2	GSM343287 Drosophila Toll 10b mutant embryos	S8 S2-48,+48, KC-48, +48 mix	V076 ML-DmBG3-C2	GSM280087 S2cell (AGO2IP)	SRR001346 ago2 beta-eliminated	GSM239050 fly heads, beta-eliminated	S16 KC -48 #1	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	V011 Sg4	SRR001340 IR beta-eliminated	GSM180330 very early embryo (0-1)	SRR001342 WT_males beta-eliminated	SRR029032 r2d2 knockdown	S31 s2+48 #1	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	SRR032092 mock oxidized	SRR032094 ago2 knockdown	SRR029033 lacZ knockdown	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	V063 CS,ovary,AGO1IP	SRR029030 dcr-2 knockdown	V098 dcr-2[L811fsX] ovary	GSM379060 SpnE Heterozygote	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	GSM280084 loqs-/- ovaries (18-29nt)	SRR029029 dcr-1 knockdown	S15 S2 -48 #1	V009 CMEL1	V019 GM2 cell	SRR014280 Ovary_rep1 w1118_P	V088 r2d2[1] ovary total RNA	V089 ago2[414] ovary total RNA	GSM280088 S2cell (AGO1IP)	V097 CS ovary	V066 r2d2[1], ovary, AGO1IP	GSM379064 Vasa Mutant	V026 1182-4H cell	GSM379067 SpnE Mutant	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	OSS8 Drosophila OSS cell small RNA libraries, rep4	GSM379056 Krimp Heterozygote	V010 MLDmD20c5	V028 CMEW1 Cl.8+ cell	OSS7 Drosophila OSS cell small RNA libraries, rep3	OSS6 Drosophila OSS cell small RNA libraries, rep2	GSM379059	SRR032093 ago1 knockdown	GSM379057 Krimp Mutant	V064 ago2[414], ovary, AGO1IP	SRR014282 Ovary_rep1 wK_P	GSM239051 S2 cells, beta-eliminated	V065 dcr-2[L811fsX], ovary, AGO1IP	OSS2 Drosophila OSS cell small RNA libraries, rep1	GSM379051 Armi Mutant	V075 ML-DmBG1-C1	GSM379062 Squ Mutant	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	SRR029031 loqs-ORF knockdown	GSM379050 Armi Heterozygote	SRR023197 RNA Library from S2 control cells	GSM379063 Vasa Heterozygote	V020 S2R+ cell	SRR023402 total RNA extracted from NLS-P19 cells	GSM379052 Aub Heterozygote	SRR014275 Ovary_rep1 LK_P	SRR014273 Ovary_rep1_Har_P	SRR032095 AGO1 IP dcr2 knockdown	SRR014277 Ovary_rep1 NA_P	V021 ML-DmD21 cell	SRR010958 Piwi IP in Ago3 trans-heterozygotes	GSM280082 WT ovaries (18-29nt)	GSM280083 dcr-2-/- ovaries (18-29nt)	V024 kc167 cell	GSM379066 Zuc Mutant	GSM379058	GSM280086 WT ovaries (AGO2IP)	V018 Kc167 cell	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	GSM379065 Zuc Heterozygote	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR010952 Ago3 trans-heterozygotes, oxidized	SRR010956 Piwi IP in Ago3 heterozygotes	GSM424740 S2 pKF63 stably transfected	SRR010954 Aub trans-heterozygotes, oxidized	SRR023400 total RNA extracted from P19 cells	SRR023407 RNA bound by NLS-P19 protein	GSM180337 tissue culture cells (S2 only)	SRR010960 wt, oxidized	GSM379054 Flam Heterozygote	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM379053 Aub Mutant	GSM379055 Flam Mutant	SRR010959 Ago3 IP in heterozygotes	GSM424741 S2 pKF63 transiently transfected	SRR032096 AGO2 IP dcr2 knockdown	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	V025 S2R+ cell	GSM379061 Squ Heterozygote	V067 S2-NP	SRR023399 RNA bound by P19 protein	SRR010955 Aub IP in Ago3 heterozygotes	GSM424739 S2 parental	SRR029028 untreated (mock)	V033 CMEW1 Cl.8+ cell	SRR010951 Ago3 heterozygotes, oxidized	SRR010953 Aub heterozygotes, oxidized
..........CCCAAGTGTCCTTCGTCATTTGGTA..................................................................................................................	25	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................TTTGGTACGTTTTTCTCCTGGTATCC...............................................................................................	26	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................TAGGCCTATATGTATTTCCACCATA..................................................................	25	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................GTATTTCCACCATAAGGCACGCGGTGA.....................................................	27	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0