Page generated on Fri Oct 15 12:01:44 2010

dme-mir-137



dme-mir-137

View dme-mir-137 on miRBase

miRNA	Length	Perfect(sense)	Perfect(antisense)	5' moR	5'arm	Loop	3'arm	3' moR	Other	Loop Size	Mature	Star
dme-mir-137	140	27349	5	1	551		26801		1	15	26801	551

CCAAGTGGATTACGATGGCGTCGCCAATCTCCAATGGCCACGTGTATGCTCGTAGCTATAACCTGAAATCCAAATGTTATTGCTTGAGAATACACGTAGTTCACCGAGATTTGTTCAGCAATAAAAAGAGCGAAACCCGT
.........................((((((...((..(((((((((.((((.(((.(((((.((.....))...))))).))))))).)))))))).)..))..)))))).............................-28.00
....((((((((((...((((.((((........)))).))))((((.((((.(((.(((((.((.....))...))))).))))))).)))).))))))))))((.(.(((((((...........))))))).).)).-39.80
Sense strand

	Size	Blast	Total	SRR029633 total small RNAs from hen1 homozygous flies	SRR031697 Total small RNAs from dcr-2 heterozygous flies	V082 embryo 14-24hr	SRR031692 Total small RNAs from Oregon R	SRR031703 Total small RNAs from r2d2 homozygous flies	SRR031699 Total small RNAs from dcr-2 homozygous flies	SRR031696_2152	SRR031701 Total small RNAs from r2d2 heterozygous flies	V090 CS  male total RNA	SRR001349 heterozygous dcr-2_untreated	SRR001338 IR non-beta-eliminated	SRR001664 homozygous dcr-2_untreated	S29 male head #1	V083 male, one day	SRR001347 ago2 untreated	V001 IR-	V084 female, one day	V002 IR+	V024 kc167 cell	V018 Kc167 cell	SRR001345 ago2 non-beta-eliminated	S24 male body #2	S22 female head #1	S2 female head	SRR001343 dcr-2 non-beta-eliminated	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	SRR001348 ago2 oxidized	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	V009 CMEL1	GSM424740 S2 pKF63 stably transfected	SRR001344 dcr-2 beta-eliminated	GSM467729 WT	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	V098 dcr-2[L811fsX] ovary	S7 12-24hr embryo	S1 male head	S21 disk #2	S23 female body #2	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	V081 embryo 2-6hr	GSM467730 r2d2	S5 imaginal disc	S28 0-2d pupae	GSM280085 WT testes (18-24nt)	S9 0-1h #3 (7)	GSM467731 loq	V097 CS ovary	GSM180328 adult heads (female heads, male heads)	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	V008 S2-DRSC	V033 CMEW1 Cl.8+ cell	S26 1st instar #2	S27 0-1d Pupae (w)	SRR031693_4	GSM180333 late embryo (12-24)	V076 ML-DmBG3-C2	V028 CMEW1 Cl.8+ cell	S25 1st instar #1	S19 2-4day pupae #1	V075 ML-DmBG1-C1	GSM379059	V063 CS,ovary,AGO1IP	S3 male body	S35 KC+48 #2	GSM246084 D. melanogaster adult male heads 454	V064 ago2[414], ovary, AGO1IP	V088 r2d2[1] ovary total RNA	SRR001337 WT_females beta-eliminated	V089 ago2[414] ovary total RNA	S4 female body	SRR001340 IR beta-eliminated	V065 dcr-2[L811fsX], ovary, AGO1IP	V066 r2d2[1], ovary, AGO1IP	GSM239041 fly heads, non beta-eliminated	V019 GM2 cell	S34 KC+48 #1	GSM239052 S2 cells, non beta-eliminated	GSM180329 adult bodies (female bodies, male bodies)	SRR001346 ago2 beta-eliminated	S12 6-10h #1 (10)	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	GSM180335 imaginal discs	SRR029033 lacZ knockdown	S33 KC-48 #2	V026 1182-4H cell	SRR029032 r2d2 knockdown	V011 Sg4	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	GSM379060 SpnE Heterozygote	S17 3rd inster #1	GSM280087 S2cell (AGO2IP)	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	GSM379065 Zuc Heterozygote	S32 s2+48 #2	S13 6-10h #2 (11)	GSM379063 Vasa Heterozygote	GSM280084 loqs-/- ovaries (18-29nt)	S18 3rd inster #2	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	S20 2-4day pupae#2	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	SRR032094 ago2 knockdown	S16 KC -48 #1	OSS8 Drosophila OSS cell small RNA libraries, rep4	GSM379054 Flam Heterozygote	SRR014273 Ovary_rep1_Har_P	OSS7 Drosophila OSS cell small RNA libraries, rep3	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	S30 s2-48 #2	SRR010955 Aub IP in Ago3 heterozygotes	OSS6 Drosophila OSS cell small RNA libraries, rep2	SRR029028 untreated (mock)	GSM379066 Zuc Mutant	GSM180332 mid embryo (6-10)	GSM379056 Krimp Heterozygote	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	SRR014275 Ovary_rep1 LK_P	OSS2 Drosophila OSS cell small RNA libraries, rep1	GSM379064 Vasa Mutant	GSM379053 Aub Mutant	GSM379055 Flam Mutant	SRR032095 AGO1 IP dcr2 knockdown	GSM280088 S2cell (AGO1IP)	GSM379062 Squ Mutant	V025 S2R+ cell	GSM379061 Squ Heterozygote	GSM343287 Drosophila Toll 10b mutant embryos	V067 S2-NP	S10 2-6h #1 (8)	GSM280083 dcr-2-/- ovaries (18-29nt)	GSM379067 SpnE Mutant	GSM379058	GSM280086 WT ovaries (AGO2IP)	S11 2-6h #2 (9)	SRR014282 Ovary_rep1 wK_P	GSM239051 S2 cells, beta-eliminated	S14 0-1hr #1 (A)	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	SRR029031 loqs-ORF knockdown	S31 s2+48 #1	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	GSM379050 Armi Heterozygote	SRR010952 Ago3 trans-heterozygotes, oxidized	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	SRR023197 RNA Library from S2 control cells	SRR032092 mock oxidized	V010 MLDmD20c5	SRR010956 Piwi IP in Ago3 heterozygotes	SRR010954 Aub trans-heterozygotes, oxidized	SRR023400 total RNA extracted from P19 cells	V020 S2R+ cell	SRR023407 RNA bound by NLS-P19 protein	GSM180337 tissue culture cells (S2 only)	SRR010960 wt, oxidized	SRR023402 total RNA extracted from NLS-P19 cells	GSM379052 Aub Heterozygote	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	SRR001342 WT_males beta-eliminated	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM239050 fly heads, beta-eliminated	SRR029029 dcr-1 knockdown	GSM180334 larvae: 1st instar and 3rd instars	SRR010959 Ago3 IP in heterozygotes	SRR014280 Ovary_rep1 w1118_P	GSM180331 early embryo (2-6)	SRR014277 Ovary_rep1 NA_P	S8 S2-48,+48, KC-48, +48 mix	GSM180330 very early embryo (0-1)	GSM424741 S2 pKF63 transiently transfected	SRR032096 AGO2 IP dcr2 knockdown	V021 ML-DmD21 cell	S15 S2 -48 #1	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	GSM379051 Armi Mutant	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	SRR010958 Piwi IP in Ago3 trans-heterozygotes	GSM280082 WT ovaries (18-29nt)	SRR023399 RNA bound by P19 protein	SRR029030 dcr-2 knockdown	GSM424739 S2 parental	SRR032093 ago1 knockdown	SRR010951 Ago3 heterozygotes, oxidized	GSM379057 Krimp Mutant	SRR010953 Aub heterozygotes, oxidized
.............GATGGCGTCGCCAATCTCC............................................................................................................	19	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................CACGTGTATGCTCGTAGCTATAA...............................................................................	23	1	2	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................CACGTGTATGCTCGTAGCTAT.................................................................................	21	1	3	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................CACGTGTATGCTCGTAGCT...................................................................................	19	1	5	1	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................ACGTGTATGCTCGTAGCTATA................................................................................	21	1	24	3	1	2	0	2	0	5	2	0	0	0	0	0	0	0	0	0	1	0	4	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................ACGTGTATGCTCGTAGCTATAA...............................................................................	22	1	21	3	1	1	0	1	0	0	1	1	0	0	0	0	0	0	1	0	5	1	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................ACGTGTATGCTCGTAGCTAT.................................................................................	20	1	30	8	0	0	2	6	4	1	5	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................ACGTGTATGCTCGTAGCTA..................................................................................	19	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................ACGTGTATGCTCGTAGCT...................................................................................	18	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................ACGTGTATGCTCGTAGCTATAAC..............................................................................	23	1	456	50	21	96	26	65	10	15	32	12	0	3	1	32	4	1	19	1	16	0	4	6	3	4	3	0	0	0	0	0	3	0	1	0	2	2	0	3	0	1	1	0	0	0	3	0	0	0	1	0	0	0	0	0	2	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................CGTGTATGCTCGTAGCTATAAC..............................................................................	22	1	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.................................................................................GCTTGAGAATACACGTAG.........................................	18	1	15	0	1	1	1	0	0	0	0	0	0	0	0	0	1	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Antisense strand

	Size	Blast	Total	SRR029633 total small RNAs from hen1 homozygous flies	SRR031697 Total small RNAs from dcr-2 heterozygous flies	V082 embryo 14-24hr	SRR031692 Total small RNAs from Oregon R	SRR031703 Total small RNAs from r2d2 homozygous flies	SRR031699 Total small RNAs from dcr-2 homozygous flies	SRR031696_2152	SRR031701 Total small RNAs from r2d2 heterozygous flies	V090 CS  male total RNA	SRR001349 heterozygous dcr-2_untreated	SRR001338 IR non-beta-eliminated	SRR001664 homozygous dcr-2_untreated	S29 male head #1	V083 male, one day	SRR001347 ago2 untreated	V001 IR-	V084 female, one day	V002 IR+	V024 kc167 cell	V018 Kc167 cell	SRR001345 ago2 non-beta-eliminated	S24 male body #2	S22 female head #1	S2 female head	SRR001343 dcr-2 non-beta-eliminated	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	SRR001348 ago2 oxidized	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	V009 CMEL1	GSM424740 S2 pKF63 stably transfected	SRR001344 dcr-2 beta-eliminated	GSM467729 WT	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	V098 dcr-2[L811fsX] ovary	S7 12-24hr embryo	S1 male head	S21 disk #2	S23 female body #2	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	V081 embryo 2-6hr	GSM467730 r2d2	S5 imaginal disc	S28 0-2d pupae	GSM280085 WT testes (18-24nt)	S9 0-1h #3 (7)	GSM467731 loq	V097 CS ovary	GSM180328 adult heads (female heads, male heads)	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	V008 S2-DRSC	V033 CMEW1 Cl.8+ cell	S26 1st instar #2	S27 0-1d Pupae (w)	SRR031693_4	GSM180333 late embryo (12-24)	V076 ML-DmBG3-C2	V028 CMEW1 Cl.8+ cell	S25 1st instar #1	S19 2-4day pupae #1	V075 ML-DmBG1-C1	GSM379059	V063 CS,ovary,AGO1IP	S3 male body	S35 KC+48 #2	GSM246084 D. melanogaster adult male heads 454	V064 ago2[414], ovary, AGO1IP	V088 r2d2[1] ovary total RNA	SRR001337 WT_females beta-eliminated	V089 ago2[414] ovary total RNA	S4 female body	SRR001340 IR beta-eliminated	V065 dcr-2[L811fsX], ovary, AGO1IP	V066 r2d2[1], ovary, AGO1IP	GSM239041 fly heads, non beta-eliminated	V019 GM2 cell	S34 KC+48 #1	GSM239052 S2 cells, non beta-eliminated	GSM180329 adult bodies (female bodies, male bodies)	SRR001346 ago2 beta-eliminated	S12 6-10h #1 (10)	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	GSM180335 imaginal discs	SRR029033 lacZ knockdown	S33 KC-48 #2	V026 1182-4H cell	SRR029032 r2d2 knockdown	V011 Sg4	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	GSM379060 SpnE Heterozygote	S17 3rd inster #1	GSM280087 S2cell (AGO2IP)	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	GSM379065 Zuc Heterozygote	S32 s2+48 #2	S13 6-10h #2 (11)	GSM379063 Vasa Heterozygote	GSM280084 loqs-/- ovaries (18-29nt)	S18 3rd inster #2	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	S20 2-4day pupae#2	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	SRR032094 ago2 knockdown	S16 KC -48 #1	OSS8 Drosophila OSS cell small RNA libraries, rep4	GSM379054 Flam Heterozygote	SRR014273 Ovary_rep1_Har_P	OSS7 Drosophila OSS cell small RNA libraries, rep3	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	S30 s2-48 #2	SRR010955 Aub IP in Ago3 heterozygotes	OSS6 Drosophila OSS cell small RNA libraries, rep2	SRR029028 untreated (mock)	GSM379066 Zuc Mutant	GSM180332 mid embryo (6-10)	GSM379056 Krimp Heterozygote	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	SRR014275 Ovary_rep1 LK_P	OSS2 Drosophila OSS cell small RNA libraries, rep1	GSM379064 Vasa Mutant	GSM379053 Aub Mutant	GSM379055 Flam Mutant	SRR032095 AGO1 IP dcr2 knockdown	GSM280088 S2cell (AGO1IP)	GSM379062 Squ Mutant	V025 S2R+ cell	GSM379061 Squ Heterozygote	GSM343287 Drosophila Toll 10b mutant embryos	V067 S2-NP	S10 2-6h #1 (8)	GSM280083 dcr-2-/- ovaries (18-29nt)	GSM379067 SpnE Mutant	GSM379058	GSM280086 WT ovaries (AGO2IP)	S11 2-6h #2 (9)	SRR014282 Ovary_rep1 wK_P	GSM239051 S2 cells, beta-eliminated	S14 0-1hr #1 (A)	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	SRR029031 loqs-ORF knockdown	S31 s2+48 #1	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	GSM379050 Armi Heterozygote	SRR010952 Ago3 trans-heterozygotes, oxidized	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	SRR023197 RNA Library from S2 control cells	SRR032092 mock oxidized	V010 MLDmD20c5	SRR010956 Piwi IP in Ago3 heterozygotes	SRR010954 Aub trans-heterozygotes, oxidized	SRR023400 total RNA extracted from P19 cells	V020 S2R+ cell	SRR023407 RNA bound by NLS-P19 protein	GSM180337 tissue culture cells (S2 only)	SRR010960 wt, oxidized	SRR023402 total RNA extracted from NLS-P19 cells	GSM379052 Aub Heterozygote	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	SRR001342 WT_males beta-eliminated	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM239050 fly heads, beta-eliminated	SRR029029 dcr-1 knockdown	GSM180334 larvae: 1st instar and 3rd instars	SRR010959 Ago3 IP in heterozygotes	SRR014280 Ovary_rep1 w1118_P	GSM180331 early embryo (2-6)	SRR014277 Ovary_rep1 NA_P	S8 S2-48,+48, KC-48, +48 mix	GSM180330 very early embryo (0-1)	GSM424741 S2 pKF63 transiently transfected	SRR032096 AGO2 IP dcr2 knockdown	V021 ML-DmD21 cell	S15 S2 -48 #1	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	GSM379051 Armi Mutant	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	SRR010958 Piwi IP in Ago3 trans-heterozygotes	GSM280082 WT ovaries (18-29nt)	SRR023399 RNA bound by P19 protein	SRR029030 dcr-2 knockdown	GSM424739 S2 parental	SRR032093 ago1 knockdown	SRR010951 Ago3 heterozygotes, oxidized	GSM379057 Krimp Mutant	SRR010953 Aub heterozygotes, oxidized
..................CGTCGCCAATCTCCAATGGCCACGTGTA..............................................................................................	28	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................GCCACGTGTATGCTCGTAGCTA..................................................................................	22	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................CCACGTGTATGCTCGTAGCTAT.................................................................................	22	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0