Page generated on Fri Oct 15 12:01:13 2010

dme-mir-13b-2



dme-mir-13b-2

View dme-mir-13b-2 on miRBase

miRNA	Length	Perfect(sense)	Perfect(antisense)	5' moR	5'arm	Loop	3'arm	3' moR	Other	Loop Size	Mature	Star
dme-mir-13b-2	119	5236904	3	4658	64272		5167881	56	40	14	5167881	64272

CTAAACATCGTCTACCTCTGCTGTCTATTAACGCGTCAAAATGACTGTGAGCTATGTGGATTTGACTTCATATCACAGCCATTTTGACGAGTTTGTTGGACAGCCAGCCTCATCAACGT
.............................(((.((((((((((.((((((....((((((......)))))))))))).)))))))))).)))..........................-26.10
........(((......((((((((((..(((.((((((((((.((((((....((((((......)))))))))))).)))))))))).)))...))))))).)))........))).-40.44
Sense strand

	Size	Blast	Total	V065 dcr-2[L811fsX], ovary, AGO1IP	V098 dcr-2[L811fsX] ovary	V066 r2d2[1], ovary, AGO1IP	V063 CS,ovary,AGO1IP	V088 r2d2[1] ovary total RNA	V064 ago2[414], ovary, AGO1IP	V097 CS ovary	V076 ML-DmBG3-C2	V089 ago2[414] ovary total RNA	SRR032095 AGO1 IP dcr2 knockdown	V081 embryo 2-6hr	V082 embryo 14-24hr	V067 S2-NP	SRR031696_2152	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	V024 kc167 cell	V019 GM2 cell	V026 1182-4H cell	GSM379057 Krimp Mutant	SRR014280 Ovary_rep1 w1118_P	GSM379065 Zuc Heterozygote	GSM280088 S2cell (AGO1IP)	GSM379064 Vasa Mutant	GSM424740 S2 pKF63 stably transfected	S33 KC-48 #2	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	S32 s2+48 #2	GSM379063 Vasa Heterozygote	V033 CMEW1 Cl.8+ cell	SRR014275 Ovary_rep1 LK_P	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	V011 Sg4	SRR029028 untreated (mock)	V021 ML-DmD21 cell	V018 Kc167 cell	SRR001345 ago2 non-beta-eliminated	V008 S2-DRSC	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	SRR031703 Total small RNAs from r2d2 homozygous flies	V009 CMEL1	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	SRR014277 Ovary_rep1 NA_P	GSM379056 Krimp Heterozygote	SRR014282 Ovary_rep1 wK_P	SRR029633 total small RNAs from hen1 homozygous flies	GSM379066 Zuc Mutant	GSM379060 SpnE Heterozygote	V025 S2R+ cell	V090 CS  male total RNA	V028 CMEW1 Cl.8+ cell	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	GSM379052 Aub Heterozygote	SRR031701 Total small RNAs from r2d2 heterozygous flies	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	S31 s2+48 #1	GSM379062 Squ Mutant	SRR014273 Ovary_rep1_Har_P	SRR031692 Total small RNAs from Oregon R	SRR029030 dcr-2 knockdown	SRR031697 Total small RNAs from dcr-2 heterozygous flies	GSM379051 Armi Mutant	GSM379061 Squ Heterozygote	SRR031699 Total small RNAs from dcr-2 homozygous flies	V083 male, one day	S29 male head #1	V002 IR+	SRR032094 ago2 knockdown	GSM379058	V020 S2R+ cell	SRR001349 heterozygous dcr-2_untreated	SRR029031 loqs-ORF knockdown	OSS6 Drosophila OSS cell small RNA libraries, rep2	S30 s2-48 #2	V084 female, one day	V001 IR-	GSM379067 SpnE Mutant	OSS2 Drosophila OSS cell small RNA libraries, rep1	GSM379054 Flam Heterozygote	V010 MLDmD20c5	SRR029032 r2d2 knockdown	SRR032093 ago1 knockdown	GSM379050 Armi Heterozygote	OSS7 Drosophila OSS cell small RNA libraries, rep3	OSS8 Drosophila OSS cell small RNA libraries, rep4	V075 ML-DmBG1-C1	S35 KC+48 #2	GSM379053 Aub Mutant	SRR001338 IR non-beta-eliminated	S15 S2 -48 #1	GSM280084 loqs-/- ovaries (18-29nt)	S16 KC -48 #1	SRR001664 homozygous dcr-2_untreated	GSM280083 dcr-2-/- ovaries (18-29nt)	SRR029033 lacZ knockdown	GSM343287 Drosophila Toll 10b mutant embryos	SRR001347 ago2 untreated	S34 KC+48 #1	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	SRR029029 dcr-1 knockdown	GSM379059	S12 6-10h #1 (10)	SRR001344 dcr-2 beta-eliminated	S24 male body #2	S28 0-2d pupae	S10 2-6h #1 (8)	S9 0-1h #3 (7)	S13 6-10h #2 (11)	S27 0-1d Pupae (w)	GSM280082 WT ovaries (18-29nt)	S14 0-1hr #1 (A)	GSM280085 WT testes (18-24nt)	GSM379055 Flam Mutant	S22 female head #1	S23 female body #2	S2 female head	S8 S2-48,+48, KC-48, +48 mix	S19 2-4day pupae #1	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	SRR001343 dcr-2 non-beta-eliminated	GSM424739 S2 parental	SRR010954 Aub trans-heterozygotes, oxidized	S21 disk #2	S5 imaginal disc	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	S7 12-24hr embryo	S11 2-6h #2 (9)	S1 male head	SRR010953 Aub heterozygotes, oxidized	SRR001348 ago2 oxidized	SRR010959 Ago3 IP in heterozygotes	S4 female body	GSM239052 S2 cells, non beta-eliminated	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	GSM467729 WT	S18 3rd inster #2	SRR032092 mock oxidized	GSM239041 fly heads, non beta-eliminated	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	GSM424741 S2 pKF63 transiently transfected	GSM467730 r2d2	S17 3rd inster #1	GSM180337 tissue culture cells (S2 only)	SRR001346 ago2 beta-eliminated	GSM180328 adult heads (female heads, male heads)	S3 male body	SRR032096 AGO2 IP dcr2 knockdown	GSM280087 S2cell (AGO2IP)	S20 2-4day pupae#2	SRR001337 WT_females beta-eliminated	S25 1st instar #1	GSM180333 late embryo (12-24)	SRR010956 Piwi IP in Ago3 heterozygotes	SRR031693_4	GSM180332 mid embryo (6-10)	SRR010955 Aub IP in Ago3 heterozygotes	GSM180335 imaginal discs	GSM180331 early embryo (2-6)	GSM467731 loq	GSM180330 very early embryo (0-1)	S26 1st instar #2	GSM180329 adult bodies (female bodies, male bodies)	SRR010958 Piwi IP in Ago3 trans-heterozygotes	GSM180334 larvae: 1st instar and 3rd instars	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	GSM246084 D. melanogaster adult male heads 454	SRR001340 IR beta-eliminated	SRR010960 wt, oxidized	SRR023400 total RNA extracted from P19 cells	SRR023399 RNA bound by P19 protein	SRR023197 RNA Library from S2 control cells	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	SRR010951 Ago3 heterozygotes, oxidized	SRR001342 WT_males beta-eliminated	SRR010952 Ago3 trans-heterozygotes, oxidized	GSM239050 fly heads, beta-eliminated	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023407 RNA bound by NLS-P19 protein	GSM239051 S2 cells, beta-eliminated	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	GSM280086 WT ovaries (AGO2IP)	SRR023402 total RNA extracted from NLS-P19 cells	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries
.......TCGTCTACCTCTGCTGTCTATTAAC.......................................................................................	25	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........CGTCTACCTCTGCTGTCTATTAAC.......................................................................................	24	1	5	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........GTCTACCTCTGCTGTCTATTAAC.......................................................................................	23	1	9	0	0	0	0	0	0	0	0	0	0	1	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0
..........TCTACCTCTGCTGTCTATTA.........................................................................................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........TCTACCTCTGCTGTCTATTAAC.......................................................................................	22	1	6	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........CTACCTCTGCTGTCTATTAAC.......................................................................................	21	1	54	0	3	0	0	3	0	2	1	0	0	0	0	1	0	0	2	0	2	0	3	1	4	0	0	0	3	1	2	0	0	0	11	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............TACCTCTGCTGTCTATTAAC.......................................................................................	20	1	389	0	24	1	0	19	0	38	6	8	0	24	2	0	0	11	9	3	6	0	7	7	13	0	11	0	5	10	11	2	4	3	15	5	1	4	2	0	0	2	2	7	0	8	6	3	12	0	2	2	6	0	1	8	3	0	12	2	3	1	0	0	0	7	1	0	0	0	0	0	1	2	2	1	0	1	0	4	1	0	4	1	0	0	1	1	1	0	1	0	0	0	2	3	0	0	0	0	0	0	0	0	2	2	0	0	1	1	0	4	0	1	2	1	2	0	2	0	0	1	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............ACCTCTGCTGTCTATTAA........................................................................................	18	1	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............ACCTCTGCTGTCTATTAAC.......................................................................................	19	1	4152	0	417	1	6	167	1	205	34	25	0	326	12	19	0	67	127	63	45	46	18	114	27	0	32	0	99	68	150	48	29	44	64	11	13	106	26	0	16	69	18	37	13	63	40	22	39	0	38	67	30	0	26	45	35	3	52	72	35	12	1	0	2	38	48	1	3	0	8	11	37	33	0	2	4	27	10	13	38	1	56	11	33	9	31	2	2	6	20	16	2	41	4	65	0	13	0	2	0	11	42	8	14	30	0	4	12	28	42	61	11	10	37	2	14	0	21	0	6	12	0	0	0	0	0	9	2	0	0	26	0	0	0	0	2	1	0	0	2	0	0	0	0	0	1	6	0	0	0	0	0	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............CCTCTGCTGTCTATTAAC.......................................................................................	18	1	34	0	0	0	0	2	0	0	1	0	0	4	1	0	0	0	0	2	0	1	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	5	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................TAACGCGTCAAAATGACTGTGA.....................................................................	22	1	22	1	0	1	0	0	0	2	0	0	1	0	0	0	0	4	1	0	0	0	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
............................TAACGCGTCAAAATGACTGTG......................................................................	21	1	14	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	2	0	1	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................AACGCGTCAAAATGACTGTG......................................................................	20	1	10	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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......................................................................TATCACAGCCATTTTGACGAG............................	21	2	77097	1235	1021	1005	1256	1204	809	692	1623	326	804	411	217	337	2458	271	403	597	1393	608	553	365	426	363	709	4612	1736	274	1408	271	284	393	499	854	324	700	1185	626	2190	320	815	1194	509	516	369	367	196	871	245	257	475	199	157	499	423	655	437	1034	201	277	528	442	1219	262	51	1277	74	2622	138	796	261	665	439	178	547	617	37	113	148	569	270	767	628	962	212	456	445	152	510	213	211	311	292	361	248	100	243	5127	268	551	777	385	210	119	162	578	151	224	494	250	99	48	492	134	110	1240	273	512	162	71	91	91	68	564	5	93	67	109	71	124	306	13	39	24	55	59	94	55	23	3	89	61	66	65	47	28	13	18	96	42	31	14	15	23	28	27	17	28	10	9	7	25	27	17	26	16	4	2	6	10	1	2	3	0	3	0	5	1	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................TATCACAGCCATTTTGACG..............................	19	2	1981	14	7	6	11	13	8	3	57	1	48	2	1	4	47	1	9	18	67	13	7	2	4	1	7	0	29	1	31	1	2	6	5	19	6	14	37	5	57	0	11	12	9	2	4	6	4	33	6	3	9	3	2	5	3	14	1	2	3	6	1	3	27	0	2	25	4	28	2	21	1	16	7	4	39	14	1	2	1	38	4	19	10	29	1	27	32	1	13	0	9	5	1	4	6	5	25	71	4	10	8	16	2	0	1	14	0	2	8	0	1	1	2	3	0	16	5	9	2	5	0	0	0	0	330	1	1	12	3	0	5	231	6	12	3	6	6	3	0	0	1	1	18	0	2	4	0	1	0	0	1	0	0	0	2	0	0	5	0	0	0	0	0	0	2	0	2	0	0	1	0	12	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................TATCACAGCCATTTTGACGAGTTTG........................	25	2	269	23	13	14	29	11	27	5	3	7	2	1	1	1	1	3	2	0	0	2	2	1	1	0	3	0	3	0	1	1	1	5	7	1	0	3	2	0	1	2	1	1	2	5	2	1	4	0	0	3	1	0	1	4	3	1	1	0	1	0	0	0	0	3	1	0	0	0	0	0	2	0	1	0	4	0	0	0	0	3	0	0	0	0	1	0	1	1	0	1	0	0	1	0	1	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	4	0	0	0	14	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................TATCACAGCCATTTTGACGA.............................	20	2	10264	153	97	112	108	90	30	52	138	13	208	20	16	30	654	15	27	63	82	54	45	5	28	64	28	65	100	15	98	5	18	28	8	33	37	44	78	142	139	8	519	38	25	39	27	35	10	411	5	10	25	20	10	31	11	373	20	43	10	12	189	50	171	10	3	170	2	83	9	55	14	30	180	26	91	31	3	9	6	75	5	34	43	41	7	75	64	5	27	8	153	32	14	15	123	10	16	2442	94	6	11	43	7	6	66	34	13	25	31	15	5	2	21	13	3	38	21	24	6	14	11	11	13	0	110	1	3	55	3	7	13	66	212	7	3	10	21	14	0	7	2	19	71	0	8	5	1	15	2	2	4	1	1	5	4	0	0	23	0	0	1	0	4	1	5	1	0	0	0	0	0	48	1	1	0	0	21	0	8	0	0	0	0	0	0	0	0	0	0	0
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......................................................................TATCACAGCCATTTTGACGAGTTTGTTGGACAG................	33	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.......................................................................ATCACAGCCATTTTGACGAG............................	20	2	131	2	0	1	7	1	0	0	1	0	3	0	0	1	5	0	2	0	2	0	2	0	0	1	0	0	6	0	10	0	0	0	0	1	4	0	5	0	3	0	0	3	1	0	0	0	1	1	1	0	0	0	0	0	0	0	0	3	0	0	0	0	6	0	1	4	0	0	1	12	0	0	0	0	2	0	0	0	0	5	0	0	4	0	0	1	3	2	3	0	0	0	0	0	0	0	0	8	0	0	0	0	0	1	0	0	0	0	4	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................ATCACAGCCATTTTGACGAGT...........................	21	2	2219	73	61	52	167	37	91	40	27	17	110	18	8	73	41	5	9	26	33	25	21	3	7	156	4	154	34	9	29	6	11	9	0	11	41	17	26	7	42	6	8	10	14	8	7	5	12	13	7	14	13	13	5	14	6	7	5	20	4	2	8	36	18	2	11	21	5	41	5	12	4	11	1	6	21	19	3	3	10	15	4	4	19	4	4	10	18	3	7	1	5	2	4	5	1	0	13	2	2	10	3	0	5	16	2	5	2	8	1	5	4	2	5	3	2	9	2	2	4	0	3	3	1	43	0	2	0	4	1	0	1	0	0	0	0	8	1	1	2	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................ATCACAGCCATTTTGACGAGTTTGT.......................	25	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................ATCACAGCCATTTTGACG..............................	18	2	4	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..........................................................................ACAGCCATTTTGACGAGT...........................	18	2	18102	876	76	661	785	55	969	40	158	23	462	94	188	263	118	301	333	208	256	198	153	316	149	386	175	0	0	293	8	218	114	266	406	108	96	225	185	932	113	341	38	94	294	467	256	81	165	365	218	229	112	9	102	317	230	45	266	0	141	189	178	29	265	146	155	265	9	0	117	21	153	101	6	107	187	2	7	100	109	82	142	53	60	19	142	177	73	1	0	77	118	0	117	0	8	70	22	0	7	0	166	41	88	0	184	0	0	0	0	0	0	43	0	4	63	0	0	0	0	0	50	50	50	0	0	1	0	2	0	0	0	0	0	0	0	0	8	0	0	20	0	0	3	0	1	0	0	13	0	0	1	8	0	7	0	0	0	2	0	0	0	0	0	0	0	0	2	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..........................................................................ACAGCCATTTTGACGAGTTTGT.......................	22	1	43	1	4	4	0	1	3	3	0	1	4	2	1	2	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................CAGCCATTTTGACGAGTT..........................	18	2	1149	44	57	61	147	29	74	32	18	5	23	13	18	11	6	3	87	7	10	1	5	3	1	2	2	0	6	42	6	6	14	30	7	2	19	0	3	0	1	8	0	2	16	5	39	1	2	2	10	5	3	1	5	9	5	0	0	7	2	15	2	14	1	0	4	6	5	0	2	3	3	3	0	7	11	0	5	5	3	16	0	0	8	12	4	10	11	2	0	1	0	4	0	0	0	27	5	0	0	0	5	14	0	0	0	1	1	0	0	1	0	12	0	1	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................CAGCCATTTTGACGAGTTT.........................	19	2	44	2	0	1	6	1	8	0	0	0	4	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	0	0	0	1	0	0	0	0	0	0	0	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................AGCCATTTTGACGAGTTT.........................	18	2	74	0	6	2	5	0	3	2	1	0	12	0	0	1	1	0	5	0	1	1	0	0	0	1	0	0	0	1	0	1	0	3	0	0	0	0	0	0	1	0	0	0	1	3	4	1	0	1	0	0	1	0	0	3	0	0	0	0	0	1	0	0	1	0	0	2	0	0	0	0	0	0	0	4	1	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................AGCCATTTTGACGAGTTTGT.......................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................AGCCATTTTGACGAGTTTG........................	19	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................ACGAGTTTGTTGGACAGC...............	18	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................TGTTGGACAGCCAGCCTCATCAA...	23	1	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................TGTTGGACAGCCAGCCTCATCAAC..	24	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................TGTTGGACAGCCAGCCTCATCAACG.	25	1	16	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	1	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................TGTTGGACAGCCAGCCTCA.......	19	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................TGTTGGACAGCCAGCCTCATCAACGT	26	1	5	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................TGTTGGACAGCCAGCCTCATC.....	21	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................TGTTGGACAGCCAGCCTCATCA....	22	1	15	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Antisense strand

	Size	Blast	Total	V065 dcr-2[L811fsX], ovary, AGO1IP	V098 dcr-2[L811fsX] ovary	V066 r2d2[1], ovary, AGO1IP	V063 CS,ovary,AGO1IP	V088 r2d2[1] ovary total RNA	V064 ago2[414], ovary, AGO1IP	V097 CS ovary	V076 ML-DmBG3-C2	V089 ago2[414] ovary total RNA	SRR032095 AGO1 IP dcr2 knockdown	V081 embryo 2-6hr	V082 embryo 14-24hr	V067 S2-NP	SRR031696_2152	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	V024 kc167 cell	V019 GM2 cell	V026 1182-4H cell	GSM379057 Krimp Mutant	SRR014280 Ovary_rep1 w1118_P	GSM379065 Zuc Heterozygote	GSM280088 S2cell (AGO1IP)	GSM379064 Vasa Mutant	GSM424740 S2 pKF63 stably transfected	S33 KC-48 #2	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	S32 s2+48 #2	GSM379063 Vasa Heterozygote	V033 CMEW1 Cl.8+ cell	SRR014275 Ovary_rep1 LK_P	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	V011 Sg4	SRR029028 untreated (mock)	V021 ML-DmD21 cell	V018 Kc167 cell	SRR001345 ago2 non-beta-eliminated	V008 S2-DRSC	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	SRR031703 Total small RNAs from r2d2 homozygous flies	V009 CMEL1	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	SRR014277 Ovary_rep1 NA_P	GSM379056 Krimp Heterozygote	SRR014282 Ovary_rep1 wK_P	SRR029633 total small RNAs from hen1 homozygous flies	GSM379066 Zuc Mutant	GSM379060 SpnE Heterozygote	V025 S2R+ cell	V090 CS  male total RNA	V028 CMEW1 Cl.8+ cell	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	GSM379052 Aub Heterozygote	SRR031701 Total small RNAs from r2d2 heterozygous flies	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	S31 s2+48 #1	GSM379062 Squ Mutant	SRR014273 Ovary_rep1_Har_P	SRR031692 Total small RNAs from Oregon R	SRR029030 dcr-2 knockdown	SRR031697 Total small RNAs from dcr-2 heterozygous flies	GSM379051 Armi Mutant	GSM379061 Squ Heterozygote	SRR031699 Total small RNAs from dcr-2 homozygous flies	V083 male, one day	S29 male head #1	V002 IR+	SRR032094 ago2 knockdown	GSM379058	V020 S2R+ cell	SRR001349 heterozygous dcr-2_untreated	SRR029031 loqs-ORF knockdown	OSS6 Drosophila OSS cell small RNA libraries, rep2	S30 s2-48 #2	V084 female, one day	V001 IR-	GSM379067 SpnE Mutant	OSS2 Drosophila OSS cell small RNA libraries, rep1	GSM379054 Flam Heterozygote	V010 MLDmD20c5	SRR029032 r2d2 knockdown	SRR032093 ago1 knockdown	GSM379050 Armi Heterozygote	OSS7 Drosophila OSS cell small RNA libraries, rep3	OSS8 Drosophila OSS cell small RNA libraries, rep4	V075 ML-DmBG1-C1	S35 KC+48 #2	GSM379053 Aub Mutant	SRR001338 IR non-beta-eliminated	S15 S2 -48 #1	GSM280084 loqs-/- ovaries (18-29nt)	S16 KC -48 #1	SRR001664 homozygous dcr-2_untreated	GSM280083 dcr-2-/- ovaries (18-29nt)	SRR029033 lacZ knockdown	GSM343287 Drosophila Toll 10b mutant embryos	SRR001347 ago2 untreated	S34 KC+48 #1	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	SRR029029 dcr-1 knockdown	GSM379059	S12 6-10h #1 (10)	SRR001344 dcr-2 beta-eliminated	S24 male body #2	S28 0-2d pupae	S10 2-6h #1 (8)	S9 0-1h #3 (7)	S13 6-10h #2 (11)	S27 0-1d Pupae (w)	GSM280082 WT ovaries (18-29nt)	S14 0-1hr #1 (A)	GSM280085 WT testes (18-24nt)	GSM379055 Flam Mutant	S22 female head #1	S23 female body #2	S2 female head	S8 S2-48,+48, KC-48, +48 mix	S19 2-4day pupae #1	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	SRR001343 dcr-2 non-beta-eliminated	GSM424739 S2 parental	SRR010954 Aub trans-heterozygotes, oxidized	S21 disk #2	S5 imaginal disc	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	S7 12-24hr embryo	S11 2-6h #2 (9)	S1 male head	SRR010953 Aub heterozygotes, oxidized	SRR001348 ago2 oxidized	SRR010959 Ago3 IP in heterozygotes	S4 female body	GSM239052 S2 cells, non beta-eliminated	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	GSM467729 WT	S18 3rd inster #2	SRR032092 mock oxidized	GSM239041 fly heads, non beta-eliminated	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	GSM424741 S2 pKF63 transiently transfected	GSM467730 r2d2	S17 3rd inster #1	GSM180337 tissue culture cells (S2 only)	SRR001346 ago2 beta-eliminated	GSM180328 adult heads (female heads, male heads)	S3 male body	SRR032096 AGO2 IP dcr2 knockdown	GSM280087 S2cell (AGO2IP)	S20 2-4day pupae#2	SRR001337 WT_females beta-eliminated	S25 1st instar #1	GSM180333 late embryo (12-24)	SRR010956 Piwi IP in Ago3 heterozygotes	SRR031693_4	GSM180332 mid embryo (6-10)	SRR010955 Aub IP in Ago3 heterozygotes	GSM180335 imaginal discs	GSM180331 early embryo (2-6)	GSM467731 loq	GSM180330 very early embryo (0-1)	S26 1st instar #2	GSM180329 adult bodies (female bodies, male bodies)	SRR010958 Piwi IP in Ago3 trans-heterozygotes	GSM180334 larvae: 1st instar and 3rd instars	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	GSM246084 D. melanogaster adult male heads 454	SRR001340 IR beta-eliminated	SRR010960 wt, oxidized	SRR023400 total RNA extracted from P19 cells	SRR023399 RNA bound by P19 protein	SRR023197 RNA Library from S2 control cells	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	SRR010951 Ago3 heterozygotes, oxidized	SRR001342 WT_males beta-eliminated	SRR010952 Ago3 trans-heterozygotes, oxidized	GSM239050 fly heads, beta-eliminated	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023407 RNA bound by NLS-P19 protein	GSM239051 S2 cells, beta-eliminated	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	GSM280086 WT ovaries (AGO2IP)	SRR023402 total RNA extracted from NLS-P19 cells	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries
.............................AACGCGTCAAAATGACTGT.......................................................................	19	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................GCGTCAAAATGACTGTGAGC...................................................................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................ACAGCCATTTTGACGAGTTT.........................	20	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0