Page generated on Fri Oct 15 12:01:50 2010

dme-mir-2279



dme-mir-2279

View dme-mir-2279 on miRBase

miRNA	Length	Perfect(sense)	Perfect(antisense)	5' moR	5'arm	Loop	3'arm	3' moR	Other	Loop Size	Mature	Star
dme-mir-2279	162	4192	171	2	3270		1079	3	9	14	3270	1079

CCGGATATGTCCGATGACCCATGGCGGGAGAGGATTATGAAAGACAATTTGAAATTAAATATCTGTGTGTGAAATTATTTAAAAGATTAATTTCACGCGAAGATATTTATTTTTACATTTGTCCCTATAATAACCGGGGTGCCAACATACATAATGGGTCCC
........................(((......((((((...(((((..(((((.(((((((((.((((((((((((.((....)).)))))))))))).))))))))).)))))...)))))..))))))..)))..........................-35.60
.((((....))))..(((((((((((.....((((((((...(((((..(((((.(((((((((.((((((((((((.((....)).)))))))))))).))))))))).)))))...)))))..))))))..))....)))))..........))))))..-51.80
Sense strand

	Size	Blast	Total	V076 ML-DmBG3-C2	V098 dcr-2[L811fsX] ovary	V065 dcr-2[L811fsX], ovary, AGO1IP	V066 r2d2[1], ovary, AGO1IP	V088 r2d2[1] ovary total RNA	V097 CS ovary	V075 ML-DmBG1-C1	V063 CS,ovary,AGO1IP	V064 ago2[414], ovary, AGO1IP	V082 embryo 14-24hr	V089 ago2[414] ovary total RNA	SRR014280 Ovary_rep1 w1118_P	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	SRR029633 total small RNAs from hen1 homozygous flies	V081 embryo 2-6hr	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	V019 GM2 cell	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	SRR031693_4	GSM379065 Zuc Heterozygote	SRR031703 Total small RNAs from r2d2 homozygous flies	GSM379063 Vasa Heterozygote	V008 S2-DRSC	SRR031701 Total small RNAs from r2d2 heterozygous flies	GSM379057 Krimp Mutant	V020 S2R+ cell	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	SRR031692 Total small RNAs from Oregon R	GSM379064 Vasa Mutant	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	SRR014275 Ovary_rep1 LK_P	SRR014282 Ovary_rep1 wK_P	SRR031699 Total small RNAs from dcr-2 homozygous flies	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	GSM379062 Squ Mutant	V025 S2R+ cell	SRR031696_2152	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	V026 1182-4H cell	V090 CS  male total RNA	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	SRR014273 Ovary_rep1_Har_P	V010 MLDmD20c5	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	S10 2-6h #1 (8)	GSM379066 Zuc Mutant	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	GSM379056 Krimp Heterozygote	S33 KC-48 #2	GSM379061 Squ Heterozygote	V001 IR-	SRR032092 mock oxidized	SRR001349 heterozygous dcr-2_untreated	GSM379051 Armi Mutant	S9 0-1h #3 (7)	S31 s2+48 #1	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	S14 0-1hr #1 (A)	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	S32 s2+48 #2	GSM379060 SpnE Heterozygote	V024 kc167 cell	GSM379067 SpnE Mutant	SRR014277 Ovary_rep1 NA_P	GSM280083 dcr-2-/- ovaries (18-29nt)	GSM379058	S29 male head #1	GSM379050 Armi Heterozygote	S22 female head #1	V002 IR+	V083 male, one day	OSS6 Drosophila OSS cell small RNA libraries, rep2	V084 female, one day	GSM379052 Aub Heterozygote	OSS2 Drosophila OSS cell small RNA libraries, rep1	V018 Kc167 cell	S24 male body #2	S16 KC -48 #1	S23 female body #2	S28 0-2d pupae	GSM379059	SRR010960 wt, oxidized	GSM379054 Flam Heterozygote	GSM379055 Flam Mutant	SRR001664 homozygous dcr-2_untreated	SRR010953 Aub heterozygotes, oxidized	SRR010954 Aub trans-heterozygotes, oxidized	S34 KC+48 #1	S15 S2 -48 #1	V009 CMEL1	S8 S2-48,+48, KC-48, +48 mix	S27 0-1d Pupae (w)	S2 female head	OSS8 Drosophila OSS cell small RNA libraries, rep4	SRR001345 ago2 non-beta-eliminated	SRR010959 Ago3 IP in heterozygotes	S30 s2-48 #2	GSM379053 Aub Mutant	S21 disk #2	SRR001347 ago2 untreated	S1 male head	OSS7 Drosophila OSS cell small RNA libraries, rep3	GSM343287 Drosophila Toll 10b mutant embryos	SRR001338 IR non-beta-eliminated	S12 6-10h #1 (10)	SRR001341 WT_males non-beta-eliminated	S4 female body	S13 6-10h #2 (11)	SRR010956 Piwi IP in Ago3 heterozygotes	V021 ML-DmD21 cell	SRR001339 WT_females non-beta-eliminated	GSM280085 WT testes (18-24nt)	S35 KC+48 #2	S19 2-4day pupae #1	SRR010952 Ago3 trans-heterozygotes, oxidized	S3 male body	GSM280082 WT ovaries (18-29nt)	SRR010955 Aub IP in Ago3 heterozygotes	S26 1st instar #2	GSM180333 late embryo (12-24)	GSM180328 adult heads (female heads, male heads)	SRR029031 loqs-ORF knockdown	S7 12-24hr embryo	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	SRR001337 WT_females beta-eliminated	GSM280084 loqs-/- ovaries (18-29nt)	SRR001343 dcr-2 non-beta-eliminated	GSM467731 loq	GSM280088 S2cell (AGO1IP)	GSM180331 early embryo (2-6)	S25 1st instar #1	GSM180330 very early embryo (0-1)	S5 imaginal disc	SRR001344 dcr-2 beta-eliminated	SRR001348 ago2 oxidized	S20 2-4day pupae#2	SRR010958 Piwi IP in Ago3 trans-heterozygotes	V067 S2-NP	GSM239041 fly heads, non beta-eliminated	GSM180329 adult bodies (female bodies, male bodies)	SRR010951 Ago3 heterozygotes, oxidized	S17 3rd inster #1	GSM280087 S2cell (AGO2IP)	GSM280086 WT ovaries (AGO2IP)	S11 2-6h #2 (9)	GSM239051 S2 cells, beta-eliminated	SRR032094 ago2 knockdown	GSM180332 mid embryo (6-10)	GSM180335 imaginal discs	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023197 RNA Library from S2 control cells	SRR029033 lacZ knockdown	GSM424740 S2 pKF63 stably transfected	SRR023400 total RNA extracted from P19 cells	SRR023407 RNA bound by NLS-P19 protein	GSM180337 tissue culture cells (S2 only)	SRR023402 total RNA extracted from NLS-P19 cells	SRR001340 IR beta-eliminated	S18 3rd inster #2	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM467729 WT	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	SRR001342 WT_males beta-eliminated	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM246084 D. melanogaster adult male heads 454	GSM239050 fly heads, beta-eliminated	SRR032095 AGO1 IP dcr2 knockdown	SRR029029 dcr-1 knockdown	GSM180334 larvae: 1st instar and 3rd instars	V028 CMEW1 Cl.8+ cell	SRR029032 r2d2 knockdown	GSM424741 S2 pKF63 transiently transfected	SRR032096 AGO2 IP dcr2 knockdown	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	V011 Sg4	SRR023399 RNA bound by P19 protein	SRR029030 dcr-2 knockdown	GSM239052 S2 cells, non beta-eliminated	GSM467730 r2d2	GSM424739 S2 parental	SRR029028 untreated (mock)	SRR032093 ago1 knockdown	V033 CMEW1 Cl.8+ cell	SRR001346 ago2 beta-eliminated
....ATATGTCCGATGACCCATGGCG........................................................................................................................................	22	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................AAAGACAATTTGAAATTAAATATCTGT................................................................................................	27	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................ACAATTTGAAATTAAATATCTGT................................................................................................	23	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................TTAAATATCTGTGTGTGA..........................................................................................	18	3	41	2	0	0	0	0	0	1	0	0	0	0	0	0	0	17	0	0	0	5	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	1	0	0	1	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................TTAAATATCTGTGTGTGAAAT.......................................................................................	21	3	553	40	31	26	33	32	32	16	24	23	7	19	6	2	3	10	14	5	8	16	0	2	9	5	2	8	3	3	3	1	2	4	8	3	3	8	2	3	4	2	14	8	2	2	3	8	4	3	2	2	2	3	5	4	3	0	1	0	1	2	1	1	1	2	2	6	2	1	1	1	5	0	4	2	0	1	3	2	1	1	1	2	0	2	3	0	1	1	1	0	2	0	0	1	0	0	1	1	0	0	1	0	0	1	0	0	1	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................TTAAATATCTGTGTGTGAAA........................................................................................	20	3	161	19	13	4	7	2	11	7	7	5	1	1	0	0	1	12	4	0	1	3	0	0	0	8	1	1	5	2	1	0	1	1	1	1	0	2	6	0	1	1	0	1	5	0	0	2	1	0	0	2	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	3	0	1	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................TTAAATATCTGTGTGTGAAATT......................................................................................	22	3	2364	126	111	97	91	88	95	72	61	64	58	48	61	65	74	19	37	47	35	28	51	54	33	17	37	29	27	20	32	22	26	22	14	24	25	11	5	22	24	23	8	10	16	15	15	15	16	13	19	12	14	11	16	10	13	13	11	18	14	14	12	14	7	11	9	6	8	11	11	7	9	5	7	5	5	4	2	8	3	6	9	6	8	7	3	2	3	4	5	0	0	6	7	4	6	6	4	1	3	1	5	2	5	1	3	1	0	3	1	3	2	3	2	2	3	2	3	2	1	2	1	2	1	1	1	1	1	1	0	0	1	0	0	0	0	0	1	0	0	1	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................TTAAATATCTGTGTGTGAA.........................................................................................	19	3	71	0	0	3	0	1	0	2	0	2	1	0	0	0	0	11	0	0	0	3	2	1	3	2	1	1	4	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	1	0	0	0	0	0	0	3	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	5	0	0	0	5	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................TTAAATATCTGTGTGTGAAATTA.....................................................................................	23	3	56	0	8	6	0	2	3	1	2	1	1	1	0	0	0	0	5	1	0	0	0	0	1	0	0	0	0	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	3	2	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................TAAATATCTGTGTGTGAAAT.......................................................................................	20	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................TAAATATCTGTGTGTGAAATT......................................................................................	21	3	6	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................AAATATCTGTGTGTGAAATT......................................................................................	20	4	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................AATATCTGTGTGTGAAAT.......................................................................................	18	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................ATATCTGTGTGTGAAATT......................................................................................	18	4	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TTAAAAGATTAATTTCACGCGAAGATAT........................................................	28	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................ATTAATTTCACGCGAAGATATTTATTT..................................................	27	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................ATTTCACGCGAAGATATTTATTT..................................................	23	1	4	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................ATTTCACGCGAAGATATTTATT...................................................	22	1	15	1	1	0	1	0	0	2	0	1	1	0	0	0	0	0	0	2	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TTTCACGCGAAGATATTTATT...................................................	21	1	86	7	6	10	1	3	0	2	2	0	1	4	4	0	0	2	0	0	1	0	0	0	0	0	0	1	1	1	0	3	0	1	1	1	0	1	5	1	0	0	0	2	1	1	2	0	1	2	0	1	1	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	3	2	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TTTCACGCGAAGATATTT......................................................	18	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TTTCACGCGAAGATATTTATTTT.................................................	23	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TTTCACGCGAAGATATTTAT....................................................	20	1	19	3	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TTTCACGCGAAGATATTTATTT..................................................	22	1	791	39	98	45	53	46	23	24	30	20	24	21	20	0	0	3	19	17	21	5	0	1	12	1	10	5	0	13	2	13	6	7	9	7	5	5	7	7	3	1	9	6	2	7	9	1	4	3	0	6	5	6	0	7	5	0	3	2	1	3	5	2	6	2	4	0	4	2	1	5	0	7	1	4	6	3	3	1	5	0	0	0	0	1	4	0	5	2	2	0	0	0	0	1	1	1	0	1	1	0	0	3	0	2	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................TTCACGCGAAGATATTTATTT..................................................	21	1	4	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................TTCACGCGAAGATATTTATT...................................................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................TCACGCGAAGATATTTATTT..................................................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................CACGCGAAGATATTTATTT..................................................	19	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................TAATAACCGGGGTGCCAAC................	19	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Antisense strand

	Size	Blast	Total	V076 ML-DmBG3-C2	V098 dcr-2[L811fsX] ovary	V065 dcr-2[L811fsX], ovary, AGO1IP	V066 r2d2[1], ovary, AGO1IP	V088 r2d2[1] ovary total RNA	V097 CS ovary	V075 ML-DmBG1-C1	V063 CS,ovary,AGO1IP	V064 ago2[414], ovary, AGO1IP	V082 embryo 14-24hr	V089 ago2[414] ovary total RNA	SRR014280 Ovary_rep1 w1118_P	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	SRR029633 total small RNAs from hen1 homozygous flies	V081 embryo 2-6hr	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	V019 GM2 cell	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	SRR031693_4	GSM379065 Zuc Heterozygote	SRR031703 Total small RNAs from r2d2 homozygous flies	GSM379063 Vasa Heterozygote	V008 S2-DRSC	SRR031701 Total small RNAs from r2d2 heterozygous flies	GSM379057 Krimp Mutant	V020 S2R+ cell	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	SRR031692 Total small RNAs from Oregon R	GSM379064 Vasa Mutant	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	SRR014275 Ovary_rep1 LK_P	SRR014282 Ovary_rep1 wK_P	SRR031699 Total small RNAs from dcr-2 homozygous flies	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	GSM379062 Squ Mutant	V025 S2R+ cell	SRR031696_2152	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	V026 1182-4H cell	V090 CS  male total RNA	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	SRR014273 Ovary_rep1_Har_P	V010 MLDmD20c5	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	S10 2-6h #1 (8)	GSM379066 Zuc Mutant	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	GSM379056 Krimp Heterozygote	S33 KC-48 #2	GSM379061 Squ Heterozygote	V001 IR-	SRR032092 mock oxidized	SRR001349 heterozygous dcr-2_untreated	GSM379051 Armi Mutant	S9 0-1h #3 (7)	S31 s2+48 #1	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	S14 0-1hr #1 (A)	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	S32 s2+48 #2	GSM379060 SpnE Heterozygote	V024 kc167 cell	GSM379067 SpnE Mutant	SRR014277 Ovary_rep1 NA_P	GSM280083 dcr-2-/- ovaries (18-29nt)	GSM379058	S29 male head #1	GSM379050 Armi Heterozygote	S22 female head #1	V002 IR+	V083 male, one day	OSS6 Drosophila OSS cell small RNA libraries, rep2	V084 female, one day	GSM379052 Aub Heterozygote	OSS2 Drosophila OSS cell small RNA libraries, rep1	V018 Kc167 cell	S24 male body #2	S16 KC -48 #1	S23 female body #2	S28 0-2d pupae	GSM379059	SRR010960 wt, oxidized	GSM379054 Flam Heterozygote	GSM379055 Flam Mutant	SRR001664 homozygous dcr-2_untreated	SRR010953 Aub heterozygotes, oxidized	SRR010954 Aub trans-heterozygotes, oxidized	S34 KC+48 #1	S15 S2 -48 #1	V009 CMEL1	S8 S2-48,+48, KC-48, +48 mix	S27 0-1d Pupae (w)	S2 female head	OSS8 Drosophila OSS cell small RNA libraries, rep4	SRR001345 ago2 non-beta-eliminated	SRR010959 Ago3 IP in heterozygotes	S30 s2-48 #2	GSM379053 Aub Mutant	S21 disk #2	SRR001347 ago2 untreated	S1 male head	OSS7 Drosophila OSS cell small RNA libraries, rep3	GSM343287 Drosophila Toll 10b mutant embryos	SRR001338 IR non-beta-eliminated	S12 6-10h #1 (10)	SRR001341 WT_males non-beta-eliminated	S4 female body	S13 6-10h #2 (11)	SRR010956 Piwi IP in Ago3 heterozygotes	V021 ML-DmD21 cell	SRR001339 WT_females non-beta-eliminated	GSM280085 WT testes (18-24nt)	S35 KC+48 #2	S19 2-4day pupae #1	SRR010952 Ago3 trans-heterozygotes, oxidized	S3 male body	GSM280082 WT ovaries (18-29nt)	SRR010955 Aub IP in Ago3 heterozygotes	S26 1st instar #2	GSM180333 late embryo (12-24)	GSM180328 adult heads (female heads, male heads)	SRR029031 loqs-ORF knockdown	S7 12-24hr embryo	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	SRR001337 WT_females beta-eliminated	GSM280084 loqs-/- ovaries (18-29nt)	SRR001343 dcr-2 non-beta-eliminated	GSM467731 loq	GSM280088 S2cell (AGO1IP)	GSM180331 early embryo (2-6)	S25 1st instar #1	GSM180330 very early embryo (0-1)	S5 imaginal disc	SRR001344 dcr-2 beta-eliminated	SRR001348 ago2 oxidized	S20 2-4day pupae#2	SRR010958 Piwi IP in Ago3 trans-heterozygotes	V067 S2-NP	GSM239041 fly heads, non beta-eliminated	GSM180329 adult bodies (female bodies, male bodies)	SRR010951 Ago3 heterozygotes, oxidized	S17 3rd inster #1	GSM280087 S2cell (AGO2IP)	GSM280086 WT ovaries (AGO2IP)	S11 2-6h #2 (9)	GSM239051 S2 cells, beta-eliminated	SRR032094 ago2 knockdown	GSM180332 mid embryo (6-10)	GSM180335 imaginal discs	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023197 RNA Library from S2 control cells	SRR029033 lacZ knockdown	GSM424740 S2 pKF63 stably transfected	SRR023400 total RNA extracted from P19 cells	SRR023407 RNA bound by NLS-P19 protein	GSM180337 tissue culture cells (S2 only)	SRR023402 total RNA extracted from NLS-P19 cells	SRR001340 IR beta-eliminated	S18 3rd inster #2	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM467729 WT	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	SRR001342 WT_males beta-eliminated	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM246084 D. melanogaster adult male heads 454	GSM239050 fly heads, beta-eliminated	SRR032095 AGO1 IP dcr2 knockdown	SRR029029 dcr-1 knockdown	GSM180334 larvae: 1st instar and 3rd instars	V028 CMEW1 Cl.8+ cell	SRR029032 r2d2 knockdown	GSM424741 S2 pKF63 transiently transfected	SRR032096 AGO2 IP dcr2 knockdown	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	V011 Sg4	SRR023399 RNA bound by P19 protein	SRR029030 dcr-2 knockdown	GSM239052 S2 cells, non beta-eliminated	GSM467730 r2d2	GSM424739 S2 parental	SRR029028 untreated (mock)	SRR032093 ago1 knockdown	V033 CMEW1 Cl.8+ cell	SRR001346 ago2 beta-eliminated
..........CCGATGACCCATGGCGGGAG....................................................................................................................................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GAAATTAAATATCTGTGTGTGA..........................................................................................	22	1	4	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................AAATTAAATATCTGTGTGTGAA.........................................................................................	22	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................AATTAAATATCTGTGTGTGAAA........................................................................................	22	2	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................ATTAAATATCTGTGTGTGAAA........................................................................................	21	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................TTAAATATCTGTGTGTGAAA........................................................................................	20	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................TAATTTCACGCGAAGATATTTAT....................................................	23	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................AATTTCACGCGAAGATATTTATTT..................................................	24	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................AATTTCACGCGAAGATATTTATT...................................................	23	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................AATTTCACGCGAAGATATTTAT....................................................	22	1	125	31	0	0	0	0	0	24	0	0	0	0	0	16	3	2	0	0	0	0	7	2	0	17	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	2	0	1	0	0	0	2	1	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................ATTTCACGCGAAGATATTTAT....................................................	21	1	5	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................ATTTCACGCGAAGATATTTATT...................................................	22	1	5	3	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................TTTCACGCGAAGATATTTATTT..................................................	22	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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