Page generated on Fri Oct 15 12:01:14 2010

dme-mir-275



dme-mir-275

View dme-mir-275 on miRBase

miRNA	Length	Perfect(sense)	Perfect(antisense)	5' moR	5'arm	Loop	3'arm	3' moR	Other	Loop Size	Mature	Star
dme-mir-275	147	3108121	21	23	51801		3056294	5	19	16	3056294	51801

TTATATGTGATGATGTTCCCCCGACTGTAAAGTCTCCTACCTTGCGCGCTAATCAGTGACCGGGGCTGGTTTTTTATATACAGTCAGGTACCTGAAGTAGCGCGCGTGGTGGCAGACATATATCTCCATCTTCACCATATAAATAAG
...............................((((.(((((.(((((((((.((((..(((..(((((............))))).)))..))))..))))))))).))))).))))..............................-46.40
((((((((((.((((.((....)).......((((.(((((.(((((((((.((((..(((..(((((............))))).)))..))))..))))))))).))))).)))).........)))).))).))))))).....-55.90
Sense strand

	Size	Blast	Total	V098 dcr-2[L811fsX] ovary	V097 CS ovary	V064 ago2[414], ovary, AGO1IP	V063 CS,ovary,AGO1IP	V065 dcr-2[L811fsX], ovary, AGO1IP	V089 ago2[414] ovary total RNA	V066 r2d2[1], ovary, AGO1IP	V076 ML-DmBG3-C2	SRR032095 AGO1 IP dcr2 knockdown	GSM343287 Drosophila Toll 10b mutant embryos	V081 embryo 2-6hr	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	V009 CMEL1	V088 r2d2[1] ovary total RNA	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	SRR014273 Ovary_rep1_Har_P	V011 Sg4	SRR014275 Ovary_rep1 LK_P	V090 CS  male total RNA	V021 ML-DmD21 cell	V033 CMEW1 Cl.8+ cell	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	GSM379065 Zuc Heterozygote	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	V019 GM2 cell	GSM379057 Krimp Mutant	OSS2 Drosophila OSS cell small RNA libraries, rep1	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	SRR014277 Ovary_rep1 NA_P	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	GSM280088 S2cell (AGO1IP)	GSM379051 Armi Mutant	OSS6 Drosophila OSS cell small RNA libraries, rep2	OSS7 Drosophila OSS cell small RNA libraries, rep3	V010 MLDmD20c5	V028 CMEW1 Cl.8+ cell	SRR014280 Ovary_rep1 w1118_P	GSM379064 Vasa Mutant	GSM379050 Armi Heterozygote	SRR031696_2152	GSM379052 Aub Heterozygote	GSM379066 Zuc Mutant	SRR029028 untreated (mock)	V067 S2-NP	GSM379054 Flam Heterozygote	GSM379063 Vasa Heterozygote	SRR029033 lacZ knockdown	V018 Kc167 cell	GSM379053 Aub Mutant	SRR029029 dcr-1 knockdown	SRR029032 r2d2 knockdown	GSM379056 Krimp Heterozygote	SRR010959 Ago3 IP in heterozygotes	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	V024 kc167 cell	OSS8 Drosophila OSS cell small RNA libraries, rep4	SRR029030 dcr-2 knockdown	SRR029031 loqs-ORF knockdown	SRR014282 Ovary_rep1 wK_P	V026 1182-4H cell	GSM280082 WT ovaries (18-29nt)	GSM280083 dcr-2-/- ovaries (18-29nt)	SRR031699 Total small RNAs from dcr-2 homozygous flies	GSM379062 Squ Mutant	GSM379058	SRR032094 ago2 knockdown	V008 S2-DRSC	GSM379067 SpnE Mutant	SRR010956 Piwi IP in Ago3 heterozygotes	GSM379060 SpnE Heterozygote	SRR029633 total small RNAs from hen1 homozygous flies	GSM379061 Squ Heterozygote	V001 IR-	SRR010958 Piwi IP in Ago3 trans-heterozygotes	SRR010954 Aub trans-heterozygotes, oxidized	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR031692 Total small RNAs from Oregon R	S33 KC-48 #2	SRR010953 Aub heterozygotes, oxidized	GSM379059	S28 0-2d pupae	V083 male, one day	V075 ML-DmBG1-C1	S32 s2+48 #2	V020 S2R+ cell	V002 IR+	V084 female, one day	SRR001664 homozygous dcr-2_untreated	SRR031703 Total small RNAs from r2d2 homozygous flies	SRR001338 IR non-beta-eliminated	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	SRR010955 Aub IP in Ago3 heterozygotes	SRR032093 ago1 knockdown	SRR031701 Total small RNAs from r2d2 heterozygous flies	V025 S2R+ cell	GSM280084 loqs-/- ovaries (18-29nt)	SRR001349 heterozygous dcr-2_untreated	V082 embryo 14-24hr	SRR001345 ago2 non-beta-eliminated	S31 s2+48 #1	S30 s2-48 #2	S19 2-4day pupae #1	GSM379055 Flam Mutant	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	S9 0-1h #3 (7)	SRR001347 ago2 untreated	GSM424740 S2 pKF63 stably transfected	S13 6-10h #2 (11)	S27 0-1d Pupae (w)	S29 male head #1	SRR001343 dcr-2 non-beta-eliminated	GSM424739 S2 parental	S34 KC+48 #1	S16 KC -48 #1	S14 0-1hr #1 (A)	S35 KC+48 #2	S12 6-10h #1 (10)	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	S10 2-6h #1 (8)	GSM280085 WT testes (18-24nt)	S23 female body #2	S24 male body #2	S5 imaginal disc	S21 disk #2	S22 female head #1	S15 S2 -48 #1	S8 S2-48,+48, KC-48, +48 mix	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	SRR001344 dcr-2 beta-eliminated	SRR032096 AGO2 IP dcr2 knockdown	SRR032092 mock oxidized	SRR010960 wt, oxidized	SRR031693_4	SRR001337 WT_females beta-eliminated	S17 3rd inster #1	GSM467729 WT	S4 female body	GSM280087 S2cell (AGO2IP)	S20 2-4day pupae#2	S11 2-6h #2 (9)	SRR001348 ago2 oxidized	SRR010951 Ago3 heterozygotes, oxidized	S18 3rd inster #2	SRR023400 total RNA extracted from P19 cells	GSM467730 r2d2	S2 female head	SRR010952 Ago3 trans-heterozygotes, oxidized	S3 male body	SRR023197 RNA Library from S2 control cells	GSM180335 imaginal discs	GSM180331 early embryo (2-6)	SRR023399 RNA bound by P19 protein	S1 male head	GSM180332 mid embryo (6-10)	GSM180330 very early embryo (0-1)	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	S7 12-24hr embryo	GSM180328 adult heads (female heads, male heads)	GSM180329 adult bodies (female bodies, male bodies)	GSM180334 larvae: 1st instar and 3rd instars	GSM180337 tissue culture cells (S2 only)	S25 1st instar #1	GSM467731 loq	SRR001346 ago2 beta-eliminated	GSM239052 S2 cells, non beta-eliminated	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023407 RNA bound by NLS-P19 protein	S26 1st instar #2	GSM180333 late embryo (12-24)	GSM239051 S2 cells, beta-eliminated	SRR001340 IR beta-eliminated	SRR023402 total RNA extracted from NLS-P19 cells	SRR001342 WT_males beta-eliminated	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM239050 fly heads, beta-eliminated	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM239041 fly heads, non beta-eliminated	GSM280086 WT ovaries (AGO2IP)	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	GSM424741 S2 pKF63 transiently transfected	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	GSM246084 D. melanogaster adult male heads 454
...TATGTGATGATGTTCCCCCGACTGT.......................................................................................................................	25	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................CCCGACTGTAAAGTCTCCTACCTTG.......................................................................................................	25	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................CGACTGTAAAGTCTCCTAC...........................................................................................................	19	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................CGACTGTAAAGTCTCCTACCTTG.......................................................................................................	23	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................ACTGTAAAGTCTCCTACCTTG.......................................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................CTGTAAAGTCTCCTACCTTG.......................................................................................................	20	1	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................TGTAAAGTCTCCTACCTTG.......................................................................................................	19	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................GTAAAGTCTCCTACCTTG.......................................................................................................	18	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................ACCTTGCGCGCTAATCAG...........................................................................................	18	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................TTGCGCGCTAATCAGTGACCGGGGC.................................................................................	25	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................TTGCGCGCTAATCAGTGACCG.....................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................TTGCGCGCTAATCAGTGACCGG....................................................................................	22	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................TTGCGCGCTAATCAGTGACCGGGG..................................................................................	24	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...................................................................................TCAGGTACCTGAAGTAGCGCGCGT........................................	24	1	41680	4564	3545	3209	2328	2420	3603	2604	422	320	21	200	223	371	214	910	148	291	444	279	560	156	280	262	16	152	149	121	232	140	1415	135	120	170	114	311	1203	1163	91	282	235	79	176	991	101	102	199	84	162	127	202	68	91	89	100	33	271	76	140	414	40	118	80	219	62	88	417	58	22	57	34	49	285	63	136	103	23	252	0	182	172	40	1	59	160	35	20	94	8	7	28	200	246	129	84	119	31	176	35	27	126	5	23	37	56	16	7	16	19	92	0	22	51	47	25	0	33	9	9	17	10	1	1	5	1	9	9	3	8	12	16	6	12	8	3	0	11	1	4	0	0	0	3	1	4	7	11	2	6	3	0	3	1	5	4	0	0	0	2	2	3	2	0	0	0	2	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................TCAGGTACCTGAAGTAGCGCGCGTG.......................................	25	1	62	1	1	1	1	2	1	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	17	0	0	0	0	0	10	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................TCAGGTACCTGAAGTAGCG.............................................	19	1	19983	923	488	201	208	211	119	120	1448	84	5067	165	167	213	117	337	182	258	106	170	536	81	387	104	181	127	38	115	546	131	292	81	132	52	59	52	284	256	223	307	53	70	62	279	43	30	174	89	41	41	106	96	84	94	154	92	20	23	158	129	44	91	16	46	17	26	116	22	11	118	68	25	1	25	272	13	12	3	257	85	169	106	197	77	43	139	101	102	23	26	63	130	37	99	13	5	33	41	25	21	72	24	22	18	23	14	27	7	36	43	0	15	14	44	26	0	13	10	6	25	10	89	89	15	26	11	26	7	9	9	9	10	3	2	16	1	9	17	1	5	6	0	3	3	1	1	5	11	1	2	0	5	4	4	1	0	0	1	4	0	0	0	2	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................TCAGGTACCTGAAGTAGCGCG...........................................	21	1	944137	114748	104448	54176	37945	41989	49214	26738	45573	28049	26119	26798	15274	20127	18770	5840	16917	13041	12353	12450	6560	15732	9366	7939	10426	8880	14153	10405	13819	8796	3044	7675	9132	8238	3796	3613	2732	2629	8601	5383	5455	6471	5392	1039	4095	3090	2318	3404	3230	3669	1737	5266	3221	1465	1396	4018	710	2406	3271	1222	1218	2782	2257	1362	1500	1065	743	1705	2373	1072	2327	1524	386	1976	758	940	1326	366	91	461	563	1107	89	1315	520	1041	1553	1188	1719	850	788	398	183	301	84	207	323	147	755	611	281	789	422	498	534	179	578	23	453	134	218	562	128	225	297	247	301	299	326	292	229	223	223	324	238	114	120	101	99	96	169	151	24	7	103	34	33	6	10	70	42	0	33	42	33	114	30	3	23	26	0	24	6	27	14	15	39	11	15	29	19	3	19	10	12	8	14	2	0	8	5	1	1	3	4	0	3	1	1	0	0	0	0	0	0	0	0	0	0	0
...................................................................................TCAGGTACCTGAAGTAGCGCGC..........................................	22	1	883604	125747	118498	78110	70960	65828	40560	42507	15298	5417	191	14748	10779	5081	7526	11902	11703	11398	4701	10028	10209	3463	6304	7393	7652	6248	5270	7699	3010	5031	6567	6095	6138	7028	6046	4403	5822	5536	2893	2583	4661	4099	4111	6887	3797	3910	5478	3603	3174	2705	4071	1397	2122	4287	3625	1636	1093	2401	1119	1961	3025	1653	1879	1087	2188	2223	1757	1854	1358	2371	901	1425	790	1267	1818	897	1949	559	31	1214	1458	764	31	732	650	717	574	661	346	1345	602	750	918	827	262	337	733	678	276	636	596	321	517	277	156	128	263	47	178	305	471	208	196	221	243	467	156	165	188	101	190	119	119	132	146	129	112	71	55	52	76	79	45	25	114	28	97	13	30	100	42	0	37	75	27	29	52	18	28	24	0	21	15	28	15	11	13	10	13	18	22	12	5	17	15	6	6	1	0	14	9	8	8	1	6	0	3	2	2	2	0	0	0	0	1	0	0	0	0	0
...................................................................................TCAGGTACCTGAAGTAGCGCGCGTGG......................................	26	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................TCAGGTACCTGAAGTAGC..............................................	18	1	6661	28	8	23	41	17	1	26	148	160	0	5	20	2	1	41	14	41	1	14	47	30	78	9	69	3	0	19	30	1	38	18	16	0	0	12	37	33	2	25	10	0	15	210	10	9	2	3	8	4	0	9	23	0	0	2	10	0	11	20	3	3	4	3	9	21	13	3	3	4	2	9	0	4	31	0	3	0	2566	2	9	44	2022	29	14	28	10	16	2	4	13	8	16	1	14	0	1	12	3	0	10	3	0	6	6	2	1	20	0	5	0	0	3	11	2	0	7	7	0	8	7	14	14	0	1	1	0	0	2	3	2	2	9	2	6	2	0	103	9	2	0	0	2	0	1	1	11	9	0	1	0	0	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................TCAGGTACCTGAAGTAGCGCGCG.........................................	23	1	979780	113544	131283	86680	65395	69595	85965	70191	11511	35956	268	5993	10924	10541	10689	14594	3366	7426	11541	5209	11243	8716	9760	7448	619	6917	2428	2494	2721	7044	9081	5153	2863	3200	8607	10131	7534	7758	3920	6785	4038	3035	3533	4030	2893	3463	1861	1711	3037	2912	2866	1947	2776	1397	2001	1056	3959	1129	1577	2539	1594	1324	1660	3152	2372	2434	2457	1178	751	880	646	1232	3048	710	974	1757	727	2735	26	1555	967	820	10	924	1466	781	416	610	529	352	785	978	715	908	659	1323	532	681	480	287	562	93	349	249	284	246	108	153	267	456	126	192	444	201	355	4	266	138	121	116	146	111	111	89	24	176	74	191	170	113	63	103	70	56	74	80	97	18	34	44	48	0	123	34	88	23	59	14	58	83	0	20	23	25	48	34	13	36	20	10	10	28	7	10	11	13	8	9	0	7	9	14	14	2	4	0	7	1	2	2	0	1	0	0	0	0	0	0	0	0
....................................................................................CAGGTACCTGAAGTAGCGCGCGTG.......................................	24	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................CAGGTACCTGAAGTAGCGCGCGT........................................	23	1	123	3	4	4	9	6	1	3	1	3	0	0	0	0	0	3	1	0	0	1	0	0	1	0	0	0	0	0	0	0	10	0	0	0	1	0	4	10	0	0	0	0	0	6	0	0	1	0	0	0	3	0	0	0	0	0	0	0	0	2	0	0	1	0	1	1	5	0	0	0	0	0	3	0	6	1	0	3	0	2	2	5	0	0	0	0	0	4	0	0	0	1	5	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................CAGGTACCTGAAGTAGCGCGC..........................................	21	1	1188	80	76	75	197	77	17	55	8	47	0	29	12	5	4	17	18	9	3	20	5	4	5	0	5	4	8	10	4	2	19	12	5	17	8	5	22	10	1	5	3	3	1	28	3	6	23	17	3	1	5	1	0	5	12	1	5	4	0	16	18	7	7	0	1	3	7	1	2	6	1	0	9	0	11	1	1	5	2	7	11	4	0	1	1	0	0	1	0	0	2	3	2	5	0	3	3	2	0	2	2	3	2	2	1	3	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................CAGGTACCTGAAGTAGCGCGCG.........................................	22	1	1632	93	82	109	204	78	62	86	9	92	0	6	15	17	11	23	4	8	13	11	4	5	17	8	0	7	1	7	5	4	31	10	9	0	29	10	27	22	5	17	0	3	4	33	2	7	9	17	5	0	33	3	0	4	8	1	25	6	4	13	38	7	0	1	0	2	30	6	3	2	5	2	31	0	10	5	1	16	2	20	11	8	0	0	16	1	3	4	2	0	2	4	9	1	0	9	5	6	0	0	2	0	2	4	0	2	1	1	0	4	0	0	2	7	3	0	3	1	0	2	1	1	1	0	0	1	0	0	1	0	3	0	1	0	0	2	0	2	0	0	0	0	1	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................CAGGTACCTGAAGTAGCGC............................................	19	1	161	3	4	7	15	2	2	2	3	20	0	3	1	4	2	0	3	2	0	1	0	1	1	3	7	0	0	0	1	0	1	3	0	0	0	0	1	0	2	3	0	0	1	5	0	3	5	1	0	1	3	0	0	0	4	0	3	2	2	3	0	0	0	0	0	0	1	0	0	0	1	0	0	0	5	0	0	0	10	0	0	0	6	0	0	1	0	1	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................CAGGTACCTGAAGTAGCGCG...........................................	20	1	843	71	47	46	66	48	15	26	21	27	19	28	9	23	3	10	14	10	7	10	1	5	9	16	9	2	3	10	14	3	8	6	17	14	2	2	6	6	5	6	9	3	2	1	2	1	3	5	3	0	19	8	1	0	19	2	3	3	4	9	14	2	4	0	0	3	3	2	1	2	2	3	7	0	3	1	1	1	1	2	1	1	0	2	2	0	4	2	1	2	2	4	1	1	0	0	0	2	2	1	0	1	1	1	1	0	2	0	1	1	0	0	3	0	0	0	0	1	1	2	1	0	0	2	1	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................CAGGTACCTGAAGTAGCG.............................................	18	1	31	0	0	0	0	0	0	0	1	5	0	1	0	1	0	0	0	0	0	2	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	3	1	0	0	1	0	0	0	0	2	0	2	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................AGGTACCTGAAGTAGCGCGCG.........................................	21	1	10047	594	246	891	1474	772	539	668	92	278	81	119	180	92	60	274	103	109	92	83	77	95	87	99	6	71	32	31	29	83	161	78	53	14	165	199	143	143	47	62	89	51	61	21	66	81	36	40	66	55	19	16	29	10	27	26	42	24	24	77	40	14	31	31	53	60	6	33	29	11	13	43	18	17	5	147	7	12	0	10	13	0	0	15	0	27	5	3	7	2	16	2	11	4	0	6	5	3	5	3	1	3	1	3	1	4	12	2	0	0	0	0	0	0	2	0	2	2	0	0	0	1	1	0	0	1	0	0	0	1	0	0	2	1	0	14	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................AGGTACCTGAAGTAGCGCGC..........................................	20	1	9300	1015	639	653	1402	564	238	323	106	58	207	229	155	48	35	189	196	140	31	144	72	23	57	76	100	70	54	149	26	67	83	108	111	90	91	73	79	89	29	21	86	54	78	31	77	104	49	53	51	62	24	8	21	9	31	27	7	50	13	31	19	14	31	15	33	48	15	37	36	21	6	50	6	32	6	46	19	4	0	11	9	0	0	15	0	17	4	0	2	5	15	0	6	3	0	1	11	1	3	10	0	8	2	0	0	3	12	1	0	0	0	0	4	0	3	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	2	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................AGGTACCTGAAGTAGCGC............................................	18	1	1117	88	48	38	88	43	11	16	68	12	0	52	26	8	5	16	48	20	4	40	5	6	12	8	58	9	2	21	8	7	7	13	18	10	7	11	2	6	7	3	10	10	11	1	11	8	17	7	14	13	0	6	9	10	0	7	6	10	4	3	23	1	2	3	1	5	2	0	7	0	3	7	0	8	0	1	2	0	3	2	1	0	4	3	0	2	3	0	1	0	1	0	0	0	0	0	0	0	0	2	0	6	0	0	0	2	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................AGGTACCTGAAGTAGCGCGCGT........................................	22	1	493	42	9	35	99	18	23	31	3	15	1	6	1	0	0	11	3	1	1	2	4	3	4	6	0	2	0	1	1	1	16	3	0	7	8	7	18	15	0	4	1	1	0	0	1	1	1	4	2	7	0	0	1	11	5	0	0	1	1	10	0	0	0	2	0	1	6	2	0	0	1	1	2	1	4	4	0	2	0	1	0	0	0	0	1	0	0	0	0	0	0	0	3	1	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................AGGTACCTGAAGTAGCGCG...........................................	19	1	9711	1106	453	465	653	426	311	259	344	182	31	447	225	159	117	99	327	169	84	172	54	150	66	79	134	117	209	198	114	102	48	138	200	117	48	61	49	34	74	51	54	76	98	5	80	65	25	46	65	75	23	59	49	12	16	88	8	71	26	25	40	23	39	16	28	15	2	26	90	3	34	47	2	50	1	49	9	4	1	4	6	0	0	27	0	29	10	0	23	4	16	0	0	1	0	0	4	0	3	5	0	22	0	0	0	2	33	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................GGTACCTGAAGTAGCGCG...........................................	18	1	309	7	10	10	121	9	2	7	4	16	0	14	5	3	2	4	6	2	0	6	1	2	3	3	1	0	2	8	2	0	1	4	2	0	0	0	1	0	1	1	0	3	0	0	0	0	1	0	1	1	9	0	0	0	0	0	0	1	2	0	0	7	2	3	2	1	0	0	0	5	1	0	0	1	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................GGTACCTGAAGTAGCGCGCGT........................................	21	1	41	0	1	0	28	3	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................GGTACCTGAAGTAGCGCGCG.........................................	20	1	523	13	19	45	286	18	9	13	3	19	0	5	3	1	0	5	0	0	2	5	6	1	4	0	0	0	0	1	1	1	0	6	3	3	1	1	0	0	1	1	0	1	0	1	0	1	2	4	0	1	0	3	1	0	0	0	3	2	0	1	6	3	0	1	2	2	1	0	0	0	0	1	0	0	1	3	0	2	0	0	1	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................GGTACCTGAAGTAGCGCGC..........................................	19	1	721	36	36	24	306	41	4	18	4	52	1	13	11	0	2	10	11	8	0	7	3	0	1	2	5	0	0	12	2	0	1	10	5	0	3	0	0	1	0	0	0	3	0	2	1	1	3	2	2	2	0	0	0	0	7	0	0	3	2	0	4	7	0	1	3	12	2	0	4	0	0	1	0	3	0	1	2	0	0	0	3	2	0	0	0	1	1	1	0	3	0	0	2	1	0	0	2	1	0	0	0	0	0	0	0	2	1	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................GTACCTGAAGTAGCGCGC..........................................	18	1	605	25	34	14	148	20	7	20	2	40	0	12	13	0	0	16	15	14	0	17	2	0	4	5	11	0	1	11	0	3	1	14	9	7	0	2	1	1	2	0	0	1	1	7	2	5	6	2	0	2	0	0	0	4	0	0	0	6	0	0	0	4	0	0	6	13	1	2	1	11	0	0	0	2	1	0	3	0	0	1	0	19	0	0	1	0	0	3	0	3	0	1	5	0	0	0	2	0	0	0	0	0	0	0	1	1	0	0	0	0	0	6	0	0	0	0	0	0	1	0	0	0	0	3	0	0	0	2	2	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................GTACCTGAAGTAGCGCGCGT........................................	20	1	23	0	2	0	16	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................GTACCTGAAGTAGCGCGCG.........................................	19	1	488	5	14	30	261	20	2	28	2	20	0	2	5	0	2	5	0	4	0	3	0	1	0	0	1	1	0	2	0	0	1	1	0	0	1	1	1	2	0	0	3	0	0	0	0	0	1	1	0	1	21	1	0	8	3	0	2	0	0	1	7	1	0	0	0	4	1	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	3	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................TACCTGAAGTAGCGCGCG.........................................	18	1	224	8	20	11	35	5	3	5	2	27	0	1	4	0	3	9	0	4	0	1	3	0	4	5	2	0	0	2	1	0	0	5	1	0	1	1	0	1	0	0	0	1	1	7	1	0	3	0	0	0	0	0	1	0	9	0	0	1	0	0	0	1	0	0	1	2	2	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	2	2	1	2	0	0	0	0	2	2	0	0	1	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	3	0	0	2	0	0	0	0	2	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................TACCTGAAGTAGCGCGCGT........................................	19	1	24	0	0	0	7	1	1	0	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................ACCTGAAGTAGCGCGCGT........................................	18	1	20	0	2	2	3	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................TGGTGGCAGACATATATCTCCAT..................	23	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................TGGTGGCAGACATATATCTCC....................	21	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TCTCCATCTTCACCATATAAAT...	22	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................TCTCCATCTTCACCATATAA.....	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Antisense strand

	Size	Blast	Total	V098 dcr-2[L811fsX] ovary	V097 CS ovary	V064 ago2[414], ovary, AGO1IP	V063 CS,ovary,AGO1IP	V065 dcr-2[L811fsX], ovary, AGO1IP	V089 ago2[414] ovary total RNA	V066 r2d2[1], ovary, AGO1IP	V076 ML-DmBG3-C2	SRR032095 AGO1 IP dcr2 knockdown	GSM343287 Drosophila Toll 10b mutant embryos	V081 embryo 2-6hr	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	V009 CMEL1	V088 r2d2[1] ovary total RNA	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	SRR014273 Ovary_rep1_Har_P	V011 Sg4	SRR014275 Ovary_rep1 LK_P	V090 CS  male total RNA	V021 ML-DmD21 cell	V033 CMEW1 Cl.8+ cell	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	GSM379065 Zuc Heterozygote	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	V019 GM2 cell	GSM379057 Krimp Mutant	OSS2 Drosophila OSS cell small RNA libraries, rep1	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	SRR014277 Ovary_rep1 NA_P	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	GSM280088 S2cell (AGO1IP)	GSM379051 Armi Mutant	OSS6 Drosophila OSS cell small RNA libraries, rep2	OSS7 Drosophila OSS cell small RNA libraries, rep3	V010 MLDmD20c5	V028 CMEW1 Cl.8+ cell	SRR014280 Ovary_rep1 w1118_P	GSM379064 Vasa Mutant	GSM379050 Armi Heterozygote	SRR031696_2152	GSM379052 Aub Heterozygote	GSM379066 Zuc Mutant	SRR029028 untreated (mock)	V067 S2-NP	GSM379054 Flam Heterozygote	GSM379063 Vasa Heterozygote	SRR029033 lacZ knockdown	V018 Kc167 cell	GSM379053 Aub Mutant	SRR029029 dcr-1 knockdown	SRR029032 r2d2 knockdown	GSM379056 Krimp Heterozygote	SRR010959 Ago3 IP in heterozygotes	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	V024 kc167 cell	OSS8 Drosophila OSS cell small RNA libraries, rep4	SRR029030 dcr-2 knockdown	SRR029031 loqs-ORF knockdown	SRR014282 Ovary_rep1 wK_P	V026 1182-4H cell	GSM280082 WT ovaries (18-29nt)	GSM280083 dcr-2-/- ovaries (18-29nt)	SRR031699 Total small RNAs from dcr-2 homozygous flies	GSM379062 Squ Mutant	GSM379058	SRR032094 ago2 knockdown	V008 S2-DRSC	GSM379067 SpnE Mutant	SRR010956 Piwi IP in Ago3 heterozygotes	GSM379060 SpnE Heterozygote	SRR029633 total small RNAs from hen1 homozygous flies	GSM379061 Squ Heterozygote	V001 IR-	SRR010958 Piwi IP in Ago3 trans-heterozygotes	SRR010954 Aub trans-heterozygotes, oxidized	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR031692 Total small RNAs from Oregon R	S33 KC-48 #2	SRR010953 Aub heterozygotes, oxidized	GSM379059	S28 0-2d pupae	V083 male, one day	V075 ML-DmBG1-C1	S32 s2+48 #2	V020 S2R+ cell	V002 IR+	V084 female, one day	SRR001664 homozygous dcr-2_untreated	SRR031703 Total small RNAs from r2d2 homozygous flies	SRR001338 IR non-beta-eliminated	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	SRR010955 Aub IP in Ago3 heterozygotes	SRR032093 ago1 knockdown	SRR031701 Total small RNAs from r2d2 heterozygous flies	V025 S2R+ cell	GSM280084 loqs-/- ovaries (18-29nt)	SRR001349 heterozygous dcr-2_untreated	V082 embryo 14-24hr	SRR001345 ago2 non-beta-eliminated	S31 s2+48 #1	S30 s2-48 #2	S19 2-4day pupae #1	GSM379055 Flam Mutant	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	S9 0-1h #3 (7)	SRR001347 ago2 untreated	GSM424740 S2 pKF63 stably transfected	S13 6-10h #2 (11)	S27 0-1d Pupae (w)	S29 male head #1	SRR001343 dcr-2 non-beta-eliminated	GSM424739 S2 parental	S34 KC+48 #1	S16 KC -48 #1	S14 0-1hr #1 (A)	S35 KC+48 #2	S12 6-10h #1 (10)	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	S10 2-6h #1 (8)	GSM280085 WT testes (18-24nt)	S23 female body #2	S24 male body #2	S5 imaginal disc	S21 disk #2	S22 female head #1	S15 S2 -48 #1	S8 S2-48,+48, KC-48, +48 mix	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	SRR001344 dcr-2 beta-eliminated	SRR032096 AGO2 IP dcr2 knockdown	SRR032092 mock oxidized	SRR010960 wt, oxidized	SRR031693_4	SRR001337 WT_females beta-eliminated	S17 3rd inster #1	GSM467729 WT	S4 female body	GSM280087 S2cell (AGO2IP)	S20 2-4day pupae#2	S11 2-6h #2 (9)	SRR001348 ago2 oxidized	SRR010951 Ago3 heterozygotes, oxidized	S18 3rd inster #2	SRR023400 total RNA extracted from P19 cells	GSM467730 r2d2	S2 female head	SRR010952 Ago3 trans-heterozygotes, oxidized	S3 male body	SRR023197 RNA Library from S2 control cells	GSM180335 imaginal discs	GSM180331 early embryo (2-6)	SRR023399 RNA bound by P19 protein	S1 male head	GSM180332 mid embryo (6-10)	GSM180330 very early embryo (0-1)	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	S7 12-24hr embryo	GSM180328 adult heads (female heads, male heads)	GSM180329 adult bodies (female bodies, male bodies)	GSM180334 larvae: 1st instar and 3rd instars	GSM180337 tissue culture cells (S2 only)	S25 1st instar #1	GSM467731 loq	SRR001346 ago2 beta-eliminated	GSM239052 S2 cells, non beta-eliminated	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023407 RNA bound by NLS-P19 protein	S26 1st instar #2	GSM180333 late embryo (12-24)	GSM239051 S2 cells, beta-eliminated	SRR001340 IR beta-eliminated	SRR023402 total RNA extracted from NLS-P19 cells	SRR001342 WT_males beta-eliminated	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM239050 fly heads, beta-eliminated	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM239041 fly heads, non beta-eliminated	GSM280086 WT ovaries (AGO2IP)	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	GSM424741 S2 pKF63 transiently transfected	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	GSM246084 D. melanogaster adult male heads 454
..................................TCCTACCTTGCGCGCTAATC.............................................................................................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................TGCGCGCTAATCAGTGACCGG....................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................TGCGCGCTAATCAGTGACCGGGG..................................................................................	23	1	5	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................GCGCGCTAATCAGTGACCGGGG..................................................................................	22	1	5	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................CGCGCTAATCAGTGACCGGGG..................................................................................	21	1	3	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................AGTCAGGTACCTGAAGTAGCGCG...........................................	23	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................GTCAGGTACCTGAAGTAGCGCG...........................................	22	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................GCAGACATATATCTCCATCTT...............	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0