Page generated on Fri Oct 15 12:01:30 2010

dme-mir-278



dme-mir-278

View dme-mir-278 on miRBase

miRNA	Length	Perfect(sense)	Perfect(antisense)	5' moR	5'arm	Loop	3'arm	3' moR	Other	Loop Size	Mature	Star
dme-mir-278	147	360997	4	4	8920	2	352060	1	14	16	352060	8920

ATTTTAAATGTGATACGAGACCATGGTAATGGTACGGTGCGACCGGATGATGGTTCACAACGACCGTGTCATTTAAACGGGTCGGTGGGACTTTCGTCCGTTTGTAACGCCATTTGTCAACGATTTATCAGTGTCCGTTTCGAGAAT
...........................((((((....(((((.(((((((.(((((.((.(((((.(((.......)))))))).))))))).))))))).)))))..)))))).................................-37.20
.(((((((((.(((((...(((((....)))))..(((((((.(((((((.(((((.((.(((((.(((.......)))))))).))))))).))))))).))))...)))...................)))))))))).))))..-47.90
Sense strand

	Size	Blast	Total	SRR031696_2152	S29 male head #1	SRR029633 total small RNAs from hen1 homozygous flies	SRR001338 IR non-beta-eliminated	SRR031703 Total small RNAs from r2d2 homozygous flies	SRR031692 Total small RNAs from Oregon R	OSS6 Drosophila OSS cell small RNA libraries, rep2	SRR031701 Total small RNAs from r2d2 heterozygous flies	OSS2 Drosophila OSS cell small RNA libraries, rep1	OSS7 Drosophila OSS cell small RNA libraries, rep3	SRR031699 Total small RNAs from dcr-2 homozygous flies	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR001664 homozygous dcr-2_untreated	S24 male body #2	S22 female head #1	SRR001349 heterozygous dcr-2_untreated	SRR001347 ago2 untreated	OSS8 Drosophila OSS cell small RNA libraries, rep4	S19 2-4day pupae #1	SRR001345 ago2 non-beta-eliminated	S28 0-2d pupae	S2 female head	S23 female body #2	GSM280085 WT testes (18-24nt)	S33 KC-48 #2	S9 0-1h #3 (7)	S27 0-1d Pupae (w)	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	SRR001343 dcr-2 non-beta-eliminated	S35 KC+48 #2	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	GSM239041 fly heads, non beta-eliminated	S1 male head	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	S34 KC+48 #1	S16 KC -48 #1	S17 3rd inster #1	S5 imaginal disc	SRR001344 dcr-2 beta-eliminated	S21 disk #2	GSM180328 adult heads (female heads, male heads)	S4 female body	S18 3rd inster #2	S3 male body	V098 dcr-2[L811fsX] ovary	GSM379065 Zuc Heterozygote	S20 2-4day pupae#2	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	V097 CS ovary	GSM467729 WT	V090 CS  male total RNA	SRR001348 ago2 oxidized	V083 male, one day	S32 s2+48 #2	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	GSM239052 S2 cells, non beta-eliminated	V026 1182-4H cell	GSM379057 Krimp Mutant	SRR031693_4	GSM379051 Armi Mutant	SRR010954 Aub trans-heterozygotes, oxidized	S8 S2-48,+48, KC-48, +48 mix	V076 ML-DmBG3-C2	GSM246084 D. melanogaster adult male heads 454	GSM379066 Zuc Mutant	GSM467730 r2d2	V088 r2d2[1] ovary total RNA	V084 female, one day	GSM379064 Vasa Mutant	GSM379054 Flam Heterozygote	SRR010953 Aub heterozygotes, oxidized	GSM467731 loq	GSM379050 Armi Heterozygote	S10 2-6h #1 (8)	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	SRR010959 Ago3 IP in heterozygotes	GSM379063 Vasa Heterozygote	GSM379060 SpnE Heterozygote	SRR001337 WT_females beta-eliminated	SRR010955 Aub IP in Ago3 heterozygotes	GSM379056 Krimp Heterozygote	S7 12-24hr embryo	GSM379052 Aub Heterozygote	S31 s2+48 #1	SRR014275 Ovary_rep1 LK_P	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	GSM379062 Squ Mutant	SRR014277 Ovary_rep1 NA_P	GSM379053 Aub Mutant	GSM379059	GSM280084 loqs-/- ovaries (18-29nt)	SRR001340 IR beta-eliminated	V066 r2d2[1], ovary, AGO1IP	SRR010958 Piwi IP in Ago3 trans-heterozygotes	GSM180329 adult bodies (female bodies, male bodies)	SRR010956 Piwi IP in Ago3 heterozygotes	GSM379061 Squ Heterozygote	GSM379067 SpnE Mutant	GSM280082 WT ovaries (18-29nt)	GSM280083 dcr-2-/- ovaries (18-29nt)	S30 s2-48 #2	SRR014280 Ovary_rep1 w1118_P	S25 1st instar #1	V002 IR+	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	V063 CS,ovary,AGO1IP	GSM180334 larvae: 1st instar and 3rd instars	S26 1st instar #2	GSM379058	V019 GM2 cell	GSM180335 imaginal discs	V089 ago2[414] ovary total RNA	GSM239050 fly heads, beta-eliminated	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	V065 dcr-2[L811fsX], ovary, AGO1IP	SRR001346 ago2 beta-eliminated	V064 ago2[414], ovary, AGO1IP	SRR014273 Ovary_rep1_Har_P	V082 embryo 14-24hr	GSM424740 S2 pKF63 stably transfected	V001 IR-	V021 ML-DmD21 cell	GSM379055 Flam Mutant	V008 S2-DRSC	S15 S2 -48 #1	SRR014282 Ovary_rep1 wK_P	GSM424739 S2 parental	V033 CMEW1 Cl.8+ cell	SRR029028 untreated (mock)	GSM180333 late embryo (12-24)	GSM280088 S2cell (AGO1IP)	V009 CMEL1	SRR032092 mock oxidized	S11 2-6h #2 (9)	SRR029031 loqs-ORF knockdown	S13 6-10h #2 (11)	V020 S2R+ cell	S12 6-10h #1 (10)	GSM280087 S2cell (AGO2IP)	SRR029033 lacZ knockdown	SRR001342 WT_males beta-eliminated	SRR010960 wt, oxidized	V018 Kc167 cell	GSM239051 S2 cells, beta-eliminated	S14 0-1hr #1 (A)	V011 Sg4	SRR029029 dcr-1 knockdown	SRR032095 AGO1 IP dcr2 knockdown	SRR010951 Ago3 heterozygotes, oxidized	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	V028 CMEW1 Cl.8+ cell	SRR029032 r2d2 knockdown	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	V025 S2R+ cell	GSM180337 tissue culture cells (S2 only)	V075 ML-DmBG1-C1	GSM180332 mid embryo (6-10)	SRR010952 Ago3 trans-heterozygotes, oxidized	GSM180330 very early embryo (0-1)	SRR032096 AGO2 IP dcr2 knockdown	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	V067 S2-NP	V024 kc167 cell	GSM280086 WT ovaries (AGO2IP)	SRR032094 ago2 knockdown	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	SRR023197 RNA Library from S2 control cells	V010 MLDmD20c5	SRR023400 total RNA extracted from P19 cells	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	SRR023407 RNA bound by NLS-P19 protein	SRR023402 total RNA extracted from NLS-P19 cells	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM180331 early embryo (2-6)	GSM424741 S2 pKF63 transiently transfected	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	GSM343287 Drosophila Toll 10b mutant embryos	SRR023399 RNA bound by P19 protein	SRR029030 dcr-2 knockdown	SRR032093 ago1 knockdown	V081 embryo 2-6hr
..................GACCATGGTAATGGTACGGTGCGA.........................................................................................................	24	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................ACCGGATGATGGTTCACAACGACC..................................................................................	24	1	7	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................CCGGATGATGGTTCACAACGACCG.................................................................................	24	1	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................CCGGATGATGGTTCACAAC......................................................................................	19	1	42	0	0	5	0	0	0	4	2	2	5	0	0	0	0	0	0	0	5	0	1	0	1	0	0	0	0	2	0	0	0	0	5	0	0	0	0	0	2	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................CCGGATGATGGTTCACAACG.....................................................................................	20	1	111	11	1	21	0	3	0	6	8	4	10	0	2	0	4	4	1	0	2	4	0	2	0	0	0	1	0	0	1	1	2	0	5	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	3	0	0	3	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................CCGGATGATGGTTCACAACGACCGTGTCAT...........................................................................	30	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................CCGGATGATGGTTCACAACGACC..................................................................................	23	1	6640	393	447	181	40	214	138	232	117	205	150	103	99	32	109	122	37	16	190	198	219	125	75	43	3	97	32	92	39	39	21	60	594	6	15	51	47	39	43	30	32	26	13	11	16	10	81	31	21	260	87	48	21	21	13	18	16	134	0	74	29	71	22	1	15	22	4	27	25	53	8	7	20	2	5	11	0	38	18	7	12	6	10	6	6	10	11	12	14	13	8	28	9	3	5	0	21	6	0	3	21	11	4	1	17	4	6	14	3	21	5	3	19	21	1	16	20	35	8	0	11	5	33	43	9	25	7	12	3	7	0	2	0	2	1	14	0	6	3	0	6	3	1	0	0	2	4	0	0	4	6	0	0	0	4	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................CCGGATGATGGTTCACAACGAC...................................................................................	22	1	1208	50	56	27	5	22	12	118	17	136	85	27	12	3	25	7	6	3	106	18	28	13	11	4	2	20	4	13	4	4	8	11	99	0	1	5	6	5	3	2	6	2	1	3	2	1	4	0	2	44	11	1	11	5	0	3	2	31	0	3	2	9	3	0	2	2	0	1	5	4	1	0	0	0	8	0	2	0	1	2	1	3	0	1	0	0	2	5	1	0	0	0	2	0	0	0	1	0	0	0	3	2	0	1	3	0	1	4	0	1	0	1	1	2	0	1	0	0	2	0	0	0	0	0	1	0	0	2	2	0	0	0	3	0	0	3	0	3	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................CCGGATGATGGTTCACAACGACCGT................................................................................	25	1	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................CCGGATGATGGTTCACAACGACCGTG...............................................................................	26	1	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................CCGGATGATGGTTCACAACGACCGTGT..............................................................................	27	1	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................CCGGATGATGGTTCACAACGACCGTGTCA............................................................................	29	1	3	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................CCGGATGATGGTTCACAACGA....................................................................................	21	1	805	79	47	67	8	38	16	48	23	51	29	17	17	6	33	52	11	1	42	8	6	18	15	12	0	3	25	7	0	0	2	6	10	0	4	4	0	2	5	2	1	0	2	2	2	3	2	0	1	4	1	0	12	3	0	0	0	7	0	0	0	3	0	0	1	1	0	0	17	1	0	0	0	0	13	0	2	0	0	0	0	0	0	1	0	0	0	3	1	0	0	0	1	0	1	0	0	2	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.................................................................................TCGGTGGGACTTTCGTCC................................................	18	1	799	48	7	7	1	3	6	29	3	22	42	5	1	2	1	4	5	1	16	1	0	0	0	0	0	1	0	0	1	1	1	0	5	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	17	5	0	0	0	6	0	0	0	2	0	0	13	0	298	0	0	0	0	0	0	0	0	0	232	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TCGGTGGGACTTTCGTCCGTTTGT..........................................	24	1	25	4	0	0	0	0	1	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TCGGTGGGACTTTCGTCCG...............................................	19	1	841	117	22	101	49	34	16	15	44	10	20	28	19	41	15	23	23	21	5	10	7	1	8	5	6	5	12	3	2	2	3	1	30	0	6	1	1	5	5	1	7	1	0	4	0	4	2	0	2	17	10	0	1	1	24	0	1	5	7	0	0	5	0	13	0	1	0	1	1	2	0	0	0	1	0	0	0	0	1	0	0	0	2	0	1	0	0	0	0	0	0	0	0	1	0	3	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TCGGTGGGACTTTCGTCCGTT.............................................	21	1	53514	11935	2803	4457	4089	3256	2374	654	2875	709	596	2226	1510	1907	850	941	1282	1387	314	363	553	229	278	320	882	324	247	221	304	304	269	160	146	300	172	207	105	119	69	32	168	67	73	79	87	96	239	90	62	48	76	111	74	209	114	114	45	51	211	40	47	50	45	22	39	98	17	68	25	33	81	40	42	9	22	49	21	33	30	2	22	29	21	3	25	4	33	28	16	21	43	22	22	36	29	45	35	13	18	6	11	14	27	33	14	13	6	13	7	23	5	10	13	15	6	4	10	5	19	13	23	11	4	18	2	5	9	6	4	5	18	13	2	0	13	2	15	0	8	0	2	0	10	4	1	2	1	1	1	0	0	3	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TCGGTGGGACTTTCGTCCGTTTGTAAC.......................................	27	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TCGGTGGGACTTTCGTCCGTTT............................................	22	1	287107	49759	21876	19534	12653	13303	14072	13572	9815	11927	12160	9227	7410	6473	6987	6694	6393	5548	6028	4954	3163	3260	2935	2886	1479	1872	1972	1828	1220	1220	1203	1261	470	1023	1098	929	943	918	889	950	713	877	811	792	781	713	472	503	517	166	342	362	304	256	303	294	357	181	129	251	279	204	270	0	263	189	289	204	176	192	188	215	195	0	154	166	206	150	158	194	161	150	152	166	134	147	110	113	128	121	102	97	113	103	106	91	85	113	118	127	96	84	80	69	75	88	91	73	94	56	88	79	56	47	81	62	43	40	51	65	45	59	34	2	48	19	33	23	37	33	0	26	29	25	12	3	0	11	5	16	6	10	2	9	11	0	3	5	7	3	0	2	0	4	0	3	3	0	2	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TCGGTGGGACTTTCGTCCGTTTGTAA........................................	26	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TCGGTGGGACTTTCGTCCGT..............................................	20	1	5969	1276	119	619	546	327	206	76	358	80	76	355	232	305	66	65	215	215	32	8	102	11	16	21	50	14	26	2	46	46	21	4	20	37	9	2	5	2	4	1	50	3	10	2	3	6	1	2	2	5	13	1	12	6	29	10	6	4	35	2	3	10	2	8	1	6	0	1	3	2	6	3	1	6	3	2	3	0	0	0	1	1	8	0	1	0	0	1	0	0	1	0	0	4	4	4	0	1	1	0	2	0	3	5	2	0	0	0	0	0	0	0	0	3	0	0	8	0	0	1	1	0	1	0	1	1	0	5	0	0	23	0	0	0	1	0	0	0	3	0	0	0	0	0	1	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................CGGTGGGACTTTCGTCCGTTTG...........................................	22	1	3	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................CGGTGGGACTTTCGTCCGTTTGT..........................................	23	1	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................CGGTGGGACTTTCGTCCGTTT............................................	21	1	1487	275	126	120	32	129	99	20	62	15	13	80	70	28	37	87	17	24	18	34	11	13	15	16	0	9	7	15	2	2	6	2	0	0	8	3	3	4	8	5	3	3	3	3	5	6	0	0	5	3	3	1	4	0	1	0	0	0	0	1	1	2	0	0	1	0	0	0	2	0	0	0	0	0	1	0	0	3	0	6	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	2	0	0	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................CGGTGGGACTTTCGTCCGTT.............................................	20	1	295	76	4	28	14	27	12	1	20	2	1	16	8	13	7	5	2	9	2	1	1	3	4	5	1	0	0	1	0	0	1	0	1	1	4	0	3	0	0	0	0	0	1	0	0	2	0	0	2	0	1	0	3	0	3	0	0	1	3	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................CGGTGGGACTTTCGTCCGT..............................................	19	1	25	6	0	6	3	1	2	0	1	0	0	3	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................CGGTGGGACTTTCGTCCG...............................................	18	1	10	1	0	1	1	0	1	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................GGTGGGACTTTCGTCCGTT.............................................	19	1	207	39	0	14	10	15	13	8	13	13	8	15	10	2	0	0	2	4	3	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	1	2	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	2	0	0	3	0	0	3	0	0	1	0	0	0	0	1	0	0	2	0	0	2	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................GGTGGGACTTTCGTCCGTTT............................................	20	1	1260	152	0	72	26	38	64	196	22	174	149	40	39	16	0	0	19	17	109	0	3	0	1	0	0	0	0	0	2	2	4	0	1	0	0	16	0	0	0	0	1	0	0	0	0	0	1	10	0	0	2	1	0	1	0	1	0	0	0	2	11	1	3	0	0	1	0	1	0	1	3	2	5	0	0	5	0	0	5	0	2	5	1	0	4	0	6	0	1	0	0	3	1	1	2	0	0	0	0	0	1	4	2	0	0	1	0	0	0	0	0	0	2	1	0	1	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................GGTGGGACTTTCGTCCGTTTGT..........................................	22	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................GGTGGGACTTTCGTCCGTTTG...........................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................GGTGGGACTTTCGTCCGT..............................................	18	1	24	3	0	1	0	2	0	1	1	3	1	4	2	1	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................GTGGGACTTTCGTCCGTTT............................................	19	1	38	10	0	3	0	1	5	0	1	4	3	2	1	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................GTGGGACTTTCGTCCGTT.............................................	18	1	5	0	0	1	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................TGGGACTTTCGTCCGTTT............................................	18	1	234	43	15	6	0	17	0	2	24	4	0	10	11	6	11	25	1	2	0	5	1	4	2	5	0	8	4	0	0	0	2	0	1	0	3	3	0	0	0	2	0	3	0	0	0	1	0	1	3	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................GTAACGCCATTTGTCAACGATTTATCAG................	28	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Antisense strand

	Size	Blast	Total	SRR031696_2152	S29 male head #1	SRR029633 total small RNAs from hen1 homozygous flies	SRR001338 IR non-beta-eliminated	SRR031703 Total small RNAs from r2d2 homozygous flies	SRR031692 Total small RNAs from Oregon R	OSS6 Drosophila OSS cell small RNA libraries, rep2	SRR031701 Total small RNAs from r2d2 heterozygous flies	OSS2 Drosophila OSS cell small RNA libraries, rep1	OSS7 Drosophila OSS cell small RNA libraries, rep3	SRR031699 Total small RNAs from dcr-2 homozygous flies	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR001664 homozygous dcr-2_untreated	S24 male body #2	S22 female head #1	SRR001349 heterozygous dcr-2_untreated	SRR001347 ago2 untreated	OSS8 Drosophila OSS cell small RNA libraries, rep4	S19 2-4day pupae #1	SRR001345 ago2 non-beta-eliminated	S28 0-2d pupae	S2 female head	S23 female body #2	GSM280085 WT testes (18-24nt)	S33 KC-48 #2	S9 0-1h #3 (7)	S27 0-1d Pupae (w)	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	SRR001343 dcr-2 non-beta-eliminated	S35 KC+48 #2	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	GSM239041 fly heads, non beta-eliminated	S1 male head	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	S34 KC+48 #1	S16 KC -48 #1	S17 3rd inster #1	S5 imaginal disc	SRR001344 dcr-2 beta-eliminated	S21 disk #2	GSM180328 adult heads (female heads, male heads)	S4 female body	S18 3rd inster #2	S3 male body	V098 dcr-2[L811fsX] ovary	GSM379065 Zuc Heterozygote	S20 2-4day pupae#2	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	V097 CS ovary	GSM467729 WT	V090 CS  male total RNA	SRR001348 ago2 oxidized	V083 male, one day	S32 s2+48 #2	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	GSM239052 S2 cells, non beta-eliminated	V026 1182-4H cell	GSM379057 Krimp Mutant	SRR031693_4	GSM379051 Armi Mutant	SRR010954 Aub trans-heterozygotes, oxidized	S8 S2-48,+48, KC-48, +48 mix	V076 ML-DmBG3-C2	GSM246084 D. melanogaster adult male heads 454	GSM379066 Zuc Mutant	GSM467730 r2d2	V088 r2d2[1] ovary total RNA	V084 female, one day	GSM379064 Vasa Mutant	GSM379054 Flam Heterozygote	SRR010953 Aub heterozygotes, oxidized	GSM467731 loq	GSM379050 Armi Heterozygote	S10 2-6h #1 (8)	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	SRR010959 Ago3 IP in heterozygotes	GSM379063 Vasa Heterozygote	GSM379060 SpnE Heterozygote	SRR001337 WT_females beta-eliminated	SRR010955 Aub IP in Ago3 heterozygotes	GSM379056 Krimp Heterozygote	S7 12-24hr embryo	GSM379052 Aub Heterozygote	S31 s2+48 #1	SRR014275 Ovary_rep1 LK_P	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	GSM379062 Squ Mutant	SRR014277 Ovary_rep1 NA_P	GSM379053 Aub Mutant	GSM379059	GSM280084 loqs-/- ovaries (18-29nt)	SRR001340 IR beta-eliminated	V066 r2d2[1], ovary, AGO1IP	SRR010958 Piwi IP in Ago3 trans-heterozygotes	GSM180329 adult bodies (female bodies, male bodies)	SRR010956 Piwi IP in Ago3 heterozygotes	GSM379061 Squ Heterozygote	GSM379067 SpnE Mutant	GSM280082 WT ovaries (18-29nt)	GSM280083 dcr-2-/- ovaries (18-29nt)	S30 s2-48 #2	SRR014280 Ovary_rep1 w1118_P	S25 1st instar #1	V002 IR+	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	V063 CS,ovary,AGO1IP	GSM180334 larvae: 1st instar and 3rd instars	S26 1st instar #2	GSM379058	V019 GM2 cell	GSM180335 imaginal discs	V089 ago2[414] ovary total RNA	GSM239050 fly heads, beta-eliminated	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	V065 dcr-2[L811fsX], ovary, AGO1IP	SRR001346 ago2 beta-eliminated	V064 ago2[414], ovary, AGO1IP	SRR014273 Ovary_rep1_Har_P	V082 embryo 14-24hr	GSM424740 S2 pKF63 stably transfected	V001 IR-	V021 ML-DmD21 cell	GSM379055 Flam Mutant	V008 S2-DRSC	S15 S2 -48 #1	SRR014282 Ovary_rep1 wK_P	GSM424739 S2 parental	V033 CMEW1 Cl.8+ cell	SRR029028 untreated (mock)	GSM180333 late embryo (12-24)	GSM280088 S2cell (AGO1IP)	V009 CMEL1	SRR032092 mock oxidized	S11 2-6h #2 (9)	SRR029031 loqs-ORF knockdown	S13 6-10h #2 (11)	V020 S2R+ cell	S12 6-10h #1 (10)	GSM280087 S2cell (AGO2IP)	SRR029033 lacZ knockdown	SRR001342 WT_males beta-eliminated	SRR010960 wt, oxidized	V018 Kc167 cell	GSM239051 S2 cells, beta-eliminated	S14 0-1hr #1 (A)	V011 Sg4	SRR029029 dcr-1 knockdown	SRR032095 AGO1 IP dcr2 knockdown	SRR010951 Ago3 heterozygotes, oxidized	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	V028 CMEW1 Cl.8+ cell	SRR029032 r2d2 knockdown	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	V025 S2R+ cell	GSM180337 tissue culture cells (S2 only)	V075 ML-DmBG1-C1	GSM180332 mid embryo (6-10)	SRR010952 Ago3 trans-heterozygotes, oxidized	GSM180330 very early embryo (0-1)	SRR032096 AGO2 IP dcr2 knockdown	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	V067 S2-NP	V024 kc167 cell	GSM280086 WT ovaries (AGO2IP)	SRR032094 ago2 knockdown	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	SRR023197 RNA Library from S2 control cells	V010 MLDmD20c5	SRR023400 total RNA extracted from P19 cells	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	SRR023407 RNA bound by NLS-P19 protein	SRR023402 total RNA extracted from NLS-P19 cells	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM180331 early embryo (2-6)	GSM424741 S2 pKF63 transiently transfected	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	GSM343287 Drosophila Toll 10b mutant embryos	SRR023399 RNA bound by P19 protein	SRR029030 dcr-2 knockdown	SRR032093 ago1 knockdown	V081 embryo 2-6hr
...TTAAATGTGATACGAGACCAT...........................................................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....TAAATGTGATACGAGACCAT...........................................................................................................................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......AATGTGATACGAGACCAT...........................................................................................................................	18	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................CGACCGGATGATGGTTCAC.........................................................................................	19	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0