Page generated on Fri Oct 15 12:01:29 2010

dme-mir-281-1



dme-mir-281-1

View dme-mir-281-1 on miRBase

miRNA	Length	Perfect(sense)	Perfect(antisense)	5' moR	5'arm	Loop	3'arm	3' moR	Other	Loop Size	Mature	Star
dme-mir-281-1	139	389515	54	6	59554	7	329922	27	53	20	329922	59554

AACGAACCAAATCGAATCCAAATGCGAATAAGTGAATAAAGAGAGCTGTCCGTCGACAGTCCAGAAACTATTTAATATCACTGTCATGGAATTGCTCTCTTTGTATAATATTCGACGATGCGCTGTGAGGCAATGAGAC
........................((((((..((.(((((((((((..(((((.((((((...................)))))))))))...))))))))))).)).)))))).........................-32.51
..(((......)))..((((..((((((((..((.(((((((((((..(((((.((((((...................)))))))))))...))))))))))).)).)))))).))....(((....)))..)).)).-38.41
Sense strand

	Size	Blast	Total	V098 dcr-2[L811fsX] ovary	V090 CS  male total RNA	V097 CS ovary	V082 embryo 14-24hr	V083 male, one day	V084 female, one day	V089 ago2[414] ovary total RNA	V088 r2d2[1] ovary total RNA	V063 CS,ovary,AGO1IP	V064 ago2[414], ovary, AGO1IP	V065 dcr-2[L811fsX], ovary, AGO1IP	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	V081 embryo 2-6hr	S24 male body #2	V066 r2d2[1], ovary, AGO1IP	V001 IR-	V002 IR+	SRR031696_2152	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	S9 0-1h #3 (7)	SRR014275 Ovary_rep1 LK_P	SRR014280 Ovary_rep1 w1118_P	GSM379064 Vasa Mutant	S23 female body #2	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	S19 2-4day pupae #1	GSM379057 Krimp Mutant	SRR014277 Ovary_rep1 NA_P	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	SRR014273 Ovary_rep1_Har_P	SRR031703 Total small RNAs from r2d2 homozygous flies	S28 0-2d pupae	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	SRR029633 total small RNAs from hen1 homozygous flies	GSM379065 Zuc Heterozygote	GSM379056 Krimp Heterozygote	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR031701 Total small RNAs from r2d2 heterozygous flies	GSM379063 Vasa Heterozygote	SRR014282 Ovary_rep1 wK_P	GSM467729 WT	GSM379051 Armi Mutant	GSM467730 r2d2	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	GSM379050 Armi Heterozygote	GSM280083 dcr-2-/- ovaries (18-29nt)	SRR031692 Total small RNAs from Oregon R	GSM379052 Aub Heterozygote	S3 male body	S27 0-1d Pupae (w)	V019 GM2 cell	V033 CMEW1 Cl.8+ cell	GSM379060 SpnE Heterozygote	GSM379061 Squ Heterozygote	GSM379066 Zuc Mutant	S29 male head #1	SRR001338 IR non-beta-eliminated	GSM280084 loqs-/- ovaries (18-29nt)	GSM379062 Squ Mutant	SRR031699 Total small RNAs from dcr-2 homozygous flies	GSM379059	GSM379054 Flam Heterozygote	GSM379058	V076 ML-DmBG3-C2	SRR010954 Aub trans-heterozygotes, oxidized	S4 female body	S35 KC+48 #2	GSM280082 WT ovaries (18-29nt)	GSM280088 S2cell (AGO1IP)	V018 Kc167 cell	GSM379053 Aub Mutant	S32 s2+48 #2	V009 CMEL1	S7 12-24hr embryo	S17 3rd inster #1	SRR029028 untreated (mock)	S10 2-6h #1 (8)	SRR001349 heterozygous dcr-2_untreated	V024 kc167 cell	GSM424740 S2 pKF63 stably transfected	V067 S2-NP	GSM379067 SpnE Mutant	S33 KC-48 #2	SRR001664 homozygous dcr-2_untreated	GSM343287 Drosophila Toll 10b mutant embryos	V028 CMEW1 Cl.8+ cell	GSM424739 S2 parental	SRR001347 ago2 untreated	S34 KC+48 #1	SRR032095 AGO1 IP dcr2 knockdown	GSM379055 Flam Mutant	GSM467731 loq	SRR001345 ago2 non-beta-eliminated	SRR010953 Aub heterozygotes, oxidized	SRR010959 Ago3 IP in heterozygotes	V020 S2R+ cell	V021 ML-DmD21 cell	S30 s2-48 #2	S14 0-1hr #1 (A)	V010 MLDmD20c5	V026 1182-4H cell	SRR029032 r2d2 knockdown	S31 s2+48 #1	S22 female head #1	S12 6-10h #1 (10)	S13 6-10h #2 (11)	S15 S2 -48 #1	S25 1st instar #1	V025 S2R+ cell	GSM180329 adult bodies (female bodies, male bodies)	SRR029031 loqs-ORF knockdown	V008 S2-DRSC	OSS6 Drosophila OSS cell small RNA libraries, rep2	V011 Sg4	SRR032094 ago2 knockdown	SRR032092 mock oxidized	SRR010955 Aub IP in Ago3 heterozygotes	SRR029033 lacZ knockdown	GSM280085 WT testes (18-24nt)	OSS2 Drosophila OSS cell small RNA libraries, rep1	S18 3rd inster #2	SRR029030 dcr-2 knockdown	S16 KC -48 #1	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	OSS7 Drosophila OSS cell small RNA libraries, rep3	V075 ML-DmBG1-C1	SRR010958 Piwi IP in Ago3 trans-heterozygotes	S20 2-4day pupae#2	SRR010956 Piwi IP in Ago3 heterozygotes	OSS8 Drosophila OSS cell small RNA libraries, rep4	SRR001343 dcr-2 non-beta-eliminated	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	S8 S2-48,+48, KC-48, +48 mix	GSM180333 late embryo (12-24)	S2 female head	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	S11 2-6h #2 (9)	SRR001344 dcr-2 beta-eliminated	SRR010960 wt, oxidized	S21 disk #2	S26 1st instar #2	SRR032093 ago1 knockdown	SRR032096 AGO2 IP dcr2 knockdown	S5 imaginal disc	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	GSM180334 larvae: 1st instar and 3rd instars	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	SRR001348 ago2 oxidized	GSM280087 S2cell (AGO2IP)	SRR029029 dcr-1 knockdown	SRR031693_4	GSM239041 fly heads, non beta-eliminated	S1 male head	GSM180328 adult heads (female heads, male heads)	GSM424741 S2 pKF63 transiently transfected	SRR010952 Ago3 trans-heterozygotes, oxidized	SRR001337 WT_females beta-eliminated	GSM239052 S2 cells, non beta-eliminated	GSM180331 early embryo (2-6)	GSM180335 imaginal discs	GSM180330 very early embryo (0-1)	SRR010951 Ago3 heterozygotes, oxidized	SRR001340 IR beta-eliminated	GSM180332 mid embryo (6-10)	GSM180337 tissue culture cells (S2 only)	SRR001346 ago2 beta-eliminated	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023407 RNA bound by NLS-P19 protein	GSM246084 D. melanogaster adult male heads 454	GSM239050 fly heads, beta-eliminated	SRR023399 RNA bound by P19 protein	SRR023400 total RNA extracted from P19 cells	SRR023402 total RNA extracted from NLS-P19 cells	SRR001342 WT_males beta-eliminated	GSM239051 S2 cells, beta-eliminated	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM280086 WT ovaries (AGO2IP)	SRR023197 RNA Library from S2 control cells	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0
.....ACCAAATCGAATCCAAATGCG.................................................................................................................	21	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......CCAAATCGAATCCAAATGCGA................................................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GCGAATAAGTGAATAAAGAGAGC.............................................................................................	23	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................CGAATAAGTGAATAAAGAGAGC.............................................................................................	22	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................AATAAGTGAATAAAGAGAGC.............................................................................................	20	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................AATAAGTGAATAAAGAGAGCTG...........................................................................................	22	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................GAATAAAGAGAGCTGTCCGTC.....................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AAAGAGAGCTGTCCGTCG....................................................................................	18	1	63	22	11	1	1	7	1	0	0	2	3	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AAAGAGAGCTGTCCGTCGAC..................................................................................	20	1	1367	351	150	105	11	74	33	19	12	74	58	77	19	17	34	31	1	4	16	6	4	1	3	5	4	0	1	8	0	17	3	5	1	2	1	13	11	1	18	0	2	7	2	0	0	1	5	0	0	0	0	2	2	1	2	1	2	2	3	0	0	5	3	0	4	2	1	1	3	3	2	2	1	2	1	1	6	1	0	2	8	0	0	1	0	2	0	3	1	32	1	19	1	0	0	0	0	0	2	2	1	1	0	0	0	0	0	1	0	0	2	0	0	0	4	0	0	2	4	0	0	0	0	4	3	0	0	0	1	2	1	0	0	0	1	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AAAGAGAGCTGTCCGTCGA...................................................................................	19	1	822	283	136	56	2	21	8	7	5	38	22	49	14	6	15	21	1	1	13	0	0	1	0	3	0	0	2	6	0	6	2	0	0	1	2	6	1	5	7	0	1	5	6	1	0	0	1	0	0	0	1	1	1	1	1	1	1	0	2	0	1	4	2	2	2	0	0	0	2	4	0	2	0	0	0	0	7	0	0	2	1	0	0	2	0	0	0	2	0	4	0	0	0	0	5	0	0	0	0	0	0	0	1	0	2	0	3	1	0	2	0	0	2	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AAAGAGAGCTGTCCGTCGACAGTCCA............................................................................	26	1	9	2	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.....................................................................................ATGGAATTGCTCTCTTTGT...................................	19	2	38	0	1	0	5	1	0	0	1	3	0	0	5	0	0	0	3	0	0	0	1	3	0	0	2	0	1	0	0	0	1	1	2	2	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................ATGGAATTGCTCTCTTTGTA..................................	20	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................ATGGAATTGCTCTCTTTG....................................	18	2	44	3	1	3	3	1	1	0	0	3	1	0	7	3	0	3	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................TGGAATTGCTCTCTTTGT...................................	18	2	5	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................TGGAATTGCTCTCTTTGTA..................................	19	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................GTATAATATTCGACGATGCG.................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................GTATAATATTCGACGATGCGC................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................ATAATATTCGACGATGCGCTG..............	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................ATAATATTCGACGATGCGCTGTG............	23	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................TAATATTCGACGATGCGCTGT.............	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................ATTCGACGATGCGCTGTGAG..........	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................TTCGACGATGCGCTGTGAGGC........	21	1	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................TTCGACGATGCGCTGTGAG..........	19	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................TCGACGATGCGCTGTGAGGCA.......	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................CGACGATGCGCTGTGAGGCA.......	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................GACGATGCGCTGTGAGGCAAT.....	21	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................ATGCGCTGTGAGGCAATGAGA.	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Antisense strand

	Size	Blast	Total	V098 dcr-2[L811fsX] ovary	V090 CS  male total RNA	V097 CS ovary	V082 embryo 14-24hr	V083 male, one day	V084 female, one day	V089 ago2[414] ovary total RNA	V088 r2d2[1] ovary total RNA	V063 CS,ovary,AGO1IP	V064 ago2[414], ovary, AGO1IP	V065 dcr-2[L811fsX], ovary, AGO1IP	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	V081 embryo 2-6hr	S24 male body #2	V066 r2d2[1], ovary, AGO1IP	V001 IR-	V002 IR+	SRR031696_2152	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	S9 0-1h #3 (7)	SRR014275 Ovary_rep1 LK_P	SRR014280 Ovary_rep1 w1118_P	GSM379064 Vasa Mutant	S23 female body #2	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	S19 2-4day pupae #1	GSM379057 Krimp Mutant	SRR014277 Ovary_rep1 NA_P	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	SRR014273 Ovary_rep1_Har_P	SRR031703 Total small RNAs from r2d2 homozygous flies	S28 0-2d pupae	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	SRR029633 total small RNAs from hen1 homozygous flies	GSM379065 Zuc Heterozygote	GSM379056 Krimp Heterozygote	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR031701 Total small RNAs from r2d2 heterozygous flies	GSM379063 Vasa Heterozygote	SRR014282 Ovary_rep1 wK_P	GSM467729 WT	GSM379051 Armi Mutant	GSM467730 r2d2	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	GSM379050 Armi Heterozygote	GSM280083 dcr-2-/- ovaries (18-29nt)	SRR031692 Total small RNAs from Oregon R	GSM379052 Aub Heterozygote	S3 male body	S27 0-1d Pupae (w)	V019 GM2 cell	V033 CMEW1 Cl.8+ cell	GSM379060 SpnE Heterozygote	GSM379061 Squ Heterozygote	GSM379066 Zuc Mutant	S29 male head #1	SRR001338 IR non-beta-eliminated	GSM280084 loqs-/- ovaries (18-29nt)	GSM379062 Squ Mutant	SRR031699 Total small RNAs from dcr-2 homozygous flies	GSM379059	GSM379054 Flam Heterozygote	GSM379058	V076 ML-DmBG3-C2	SRR010954 Aub trans-heterozygotes, oxidized	S4 female body	S35 KC+48 #2	GSM280082 WT ovaries (18-29nt)	GSM280088 S2cell (AGO1IP)	V018 Kc167 cell	GSM379053 Aub Mutant	S32 s2+48 #2	V009 CMEL1	S7 12-24hr embryo	S17 3rd inster #1	SRR029028 untreated (mock)	S10 2-6h #1 (8)	SRR001349 heterozygous dcr-2_untreated	V024 kc167 cell	GSM424740 S2 pKF63 stably transfected	V067 S2-NP	GSM379067 SpnE Mutant	S33 KC-48 #2	SRR001664 homozygous dcr-2_untreated	GSM343287 Drosophila Toll 10b mutant embryos	V028 CMEW1 Cl.8+ cell	GSM424739 S2 parental	SRR001347 ago2 untreated	S34 KC+48 #1	SRR032095 AGO1 IP dcr2 knockdown	GSM379055 Flam Mutant	GSM467731 loq	SRR001345 ago2 non-beta-eliminated	SRR010953 Aub heterozygotes, oxidized	SRR010959 Ago3 IP in heterozygotes	V020 S2R+ cell	V021 ML-DmD21 cell	S30 s2-48 #2	S14 0-1hr #1 (A)	V010 MLDmD20c5	V026 1182-4H cell	SRR029032 r2d2 knockdown	S31 s2+48 #1	S22 female head #1	S12 6-10h #1 (10)	S13 6-10h #2 (11)	S15 S2 -48 #1	S25 1st instar #1	V025 S2R+ cell	GSM180329 adult bodies (female bodies, male bodies)	SRR029031 loqs-ORF knockdown	V008 S2-DRSC	OSS6 Drosophila OSS cell small RNA libraries, rep2	V011 Sg4	SRR032094 ago2 knockdown	SRR032092 mock oxidized	SRR010955 Aub IP in Ago3 heterozygotes	SRR029033 lacZ knockdown	GSM280085 WT testes (18-24nt)	OSS2 Drosophila OSS cell small RNA libraries, rep1	S18 3rd inster #2	SRR029030 dcr-2 knockdown	S16 KC -48 #1	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	OSS7 Drosophila OSS cell small RNA libraries, rep3	V075 ML-DmBG1-C1	SRR010958 Piwi IP in Ago3 trans-heterozygotes	S20 2-4day pupae#2	SRR010956 Piwi IP in Ago3 heterozygotes	OSS8 Drosophila OSS cell small RNA libraries, rep4	SRR001343 dcr-2 non-beta-eliminated	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	S8 S2-48,+48, KC-48, +48 mix	GSM180333 late embryo (12-24)	S2 female head	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	S11 2-6h #2 (9)	SRR001344 dcr-2 beta-eliminated	SRR010960 wt, oxidized	S21 disk #2	S26 1st instar #2	SRR032093 ago1 knockdown	SRR032096 AGO2 IP dcr2 knockdown	S5 imaginal disc	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	GSM180334 larvae: 1st instar and 3rd instars	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	SRR001348 ago2 oxidized	GSM280087 S2cell (AGO2IP)	SRR029029 dcr-1 knockdown	SRR031693_4	GSM239041 fly heads, non beta-eliminated	S1 male head	GSM180328 adult heads (female heads, male heads)	GSM424741 S2 pKF63 transiently transfected	SRR010952 Ago3 trans-heterozygotes, oxidized	SRR001337 WT_females beta-eliminated	GSM239052 S2 cells, non beta-eliminated	GSM180331 early embryo (2-6)	GSM180335 imaginal discs	GSM180330 very early embryo (0-1)	SRR010951 Ago3 heterozygotes, oxidized	SRR001340 IR beta-eliminated	GSM180332 mid embryo (6-10)	GSM180337 tissue culture cells (S2 only)	SRR001346 ago2 beta-eliminated	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023407 RNA bound by NLS-P19 protein	GSM246084 D. melanogaster adult male heads 454	GSM239050 fly heads, beta-eliminated	SRR023399 RNA bound by P19 protein	SRR023400 total RNA extracted from P19 cells	SRR023402 total RNA extracted from NLS-P19 cells	SRR001342 WT_males beta-eliminated	GSM239051 S2 cells, beta-eliminated	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM280086 WT ovaries (AGO2IP)	SRR023197 RNA Library from S2 control cells	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0
AACGAACCAAATCGAATCCAA......................................................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....AACCAAATCGAATCCAAATGC..................................................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........TCGAATCCAAATGCGAATAAG...........................................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............CGAATCCAAATGCGAATAAGTGAATAA....................................................................................................	27	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................CAAATGCGAATAAGTGAATAA....................................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................AATAAGTGAATAAAGAGAGCTGT..........................................................................................	23	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................AATAAGTGAATAAAGAGAGC.............................................................................................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................AAGTGAATAAAGAGAGCTGTC.........................................................................................	21	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................TGAATAAAGAGAGCTGTCCGT......................................................................................	21	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...................................ATAAAGAGAGCTGTCCGTCG....................................................................................	20	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................AAGAGAGCTGTCCGTCGACAG................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................AGCTGTCCGTCGACAGTCCAG...........................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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