Page generated on Fri Oct 15 12:01:16 2010

dme-mir-282



dme-mir-282

View dme-mir-282 on miRBase

miRNA	Length	Perfect(sense)	Perfect(antisense)	5' moR	5'arm	Loop	3'arm	3' moR	Other	Loop Size	Mature	Star
dme-mir-282	146	2340678	10	5	1966111	2028	372403	3	138	21	1966111	372403

TCAAATCCCACCGTTCTTTAACTATAGTTTCCTTCTAAATCTAGCCTCTACTAGGCTTTGTCTGTGCATTCGAAAGCCGATCAGACATAGCCTATAAGAGGTTAGGTGTACCAAGGCGAACAATCAGCGAAAACGGAATCGATTAC
..........................((((((((....(((((((((((..((((((.((((((.....(((.....))).)))))).))))))..))))))))))).....)))).)))).........................-42.30
...((((...(((((..((..((((.((((((((....(((((((((((..((((((.((((((.....(((.....))).)))))).))))))..))))))))))).....)))).)))).)).))..)))))))....))))..-47.30
Sense strand

	Size	Blast	Total	S32 s2+48 #2	S31 s2+48 #1	V076 ML-DmBG3-C2	GSM379057 Krimp Mutant	GSM379065 Zuc Heterozygote	S28 0-2d pupae	V025 S2R+ cell	V008 S2-DRSC	V010 MLDmD20c5	S27 0-1d Pupae (w)	V020 S2R+ cell	GSM379064 Vasa Mutant	OSS6 Drosophila OSS cell small RNA libraries, rep2	OSS2 Drosophila OSS cell small RNA libraries, rep1	V024 kc167 cell	GSM379051 Armi Mutant	OSS7 Drosophila OSS cell small RNA libraries, rep3	SRR014277 Ovary_rep1 NA_P	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	S19 2-4day pupae #1	OSS8 Drosophila OSS cell small RNA libraries, rep4	V026 1182-4H cell	V021 ML-DmD21 cell	GSM379054 Flam Heterozygote	GSM379056 Krimp Heterozygote	V033 CMEW1 Cl.8+ cell	SRR014275 Ovary_rep1 LK_P	V019 GM2 cell	V088 r2d2[1] ovary total RNA	V009 CMEL1	SRR029028 untreated (mock)	SRR014273 Ovary_rep1_Har_P	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	S30 s2-48 #2	V028 CMEW1 Cl.8+ cell	V067 S2-NP	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	SRR032094 ago2 knockdown	GSM379063 Vasa Heterozygote	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	SRR031696_2152	S15 S2 -48 #1	SRR029633 total small RNAs from hen1 homozygous flies	S35 KC+48 #2	S33 KC-48 #2	S34 KC+48 #1	GSM379053 Aub Mutant	GSM379052 Aub Heterozygote	GSM280085 WT testes (18-24nt)	SRR029029 dcr-1 knockdown	SRR031692 Total small RNAs from Oregon R	SRR029033 lacZ knockdown	S8 S2-48,+48, KC-48, +48 mix	GSM379050 Armi Heterozygote	V018 Kc167 cell	S9 0-1h #3 (7)	SRR029030 dcr-2 knockdown	SRR029032 r2d2 knockdown	V097 CS ovary	S17 3rd inster #1	GSM379060 SpnE Heterozygote	GSM379061 Squ Heterozygote	GSM379066 Zuc Mutant	GSM379055 Flam Mutant	S10 2-6h #1 (8)	V098 dcr-2[L811fsX] ovary	S14 0-1hr #1 (A)	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	GSM379067 SpnE Mutant	GSM280088 S2cell (AGO1IP)	GSM379062 Squ Mutant	S18 3rd inster #2	V083 male, one day	GSM379058	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	V063 CS,ovary,AGO1IP	V084 female, one day	SRR031701 Total small RNAs from r2d2 heterozygous flies	V011 Sg4	GSM379059	S29 male head #1	S21 disk #2	SRR031703 Total small RNAs from r2d2 homozygous flies	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	SRR031697 Total small RNAs from dcr-2 heterozygous flies	V066 r2d2[1], ovary, AGO1IP	V065 dcr-2[L811fsX], ovary, AGO1IP	S20 2-4day pupae#2	SRR001338 IR non-beta-eliminated	SRR029031 loqs-ORF knockdown	SRR032093 ago1 knockdown	GSM280084 loqs-/- ovaries (18-29nt)	SRR031693_4	GSM280083 dcr-2-/- ovaries (18-29nt)	S24 male body #2	SRR014282 Ovary_rep1 wK_P	SRR014280 Ovary_rep1 w1118_P	V064 ago2[414], ovary, AGO1IP	S5 imaginal disc	GSM280082 WT ovaries (18-29nt)	S11 2-6h #2 (9)	SRR031699 Total small RNAs from dcr-2 homozygous flies	S23 female body #2	S13 6-10h #2 (11)	V081 embryo 2-6hr	S16 KC -48 #1	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	S22 female head #1	SRR001664 homozygous dcr-2_untreated	SRR001347 ago2 untreated	SRR001349 heterozygous dcr-2_untreated	V001 IR-	V089 ago2[414] ovary total RNA	S12 6-10h #1 (10)	GSM280087 S2cell (AGO2IP)	SRR001345 ago2 non-beta-eliminated	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	V002 IR+	SRR032095 AGO1 IP dcr2 knockdown	SRR032092 mock oxidized	GSM239051 S2 cells, beta-eliminated	V082 embryo 14-24hr	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	SRR010959 Ago3 IP in heterozygotes	GSM180334 larvae: 1st instar and 3rd instars	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	S2 female head	S4 female body	SRR001343 dcr-2 non-beta-eliminated	GSM180337 tissue culture cells (S2 only)	GSM343287 Drosophila Toll 10b mutant embryos	V090 CS  male total RNA	GSM239052 S2 cells, non beta-eliminated	GSM180335 imaginal discs	GSM180331 early embryo (2-6)	S1 male head	SRR001344 dcr-2 beta-eliminated	S3 male body	GSM424739 S2 parental	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	V075 ML-DmBG1-C1	SRR010951 Ago3 heterozygotes, oxidized	SRR032096 AGO2 IP dcr2 knockdown	GSM180330 very early embryo (0-1)	SRR010960 wt, oxidized	S7 12-24hr embryo	SRR001340 IR beta-eliminated	GSM180328 adult heads (female heads, male heads)	SRR010954 Aub trans-heterozygotes, oxidized	SRR010958 Piwi IP in Ago3 trans-heterozygotes	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023407 RNA bound by NLS-P19 protein	SRR001348 ago2 oxidized	SRR010953 Aub heterozygotes, oxidized	SRR010956 Piwi IP in Ago3 heterozygotes	GSM467729 WT	SRR023402 total RNA extracted from NLS-P19 cells	SRR010952 Ago3 trans-heterozygotes, oxidized	SRR001337 WT_females beta-eliminated	SRR010955 Aub IP in Ago3 heterozygotes	SRR023400 total RNA extracted from P19 cells	GSM180329 adult bodies (female bodies, male bodies)	GSM180332 mid embryo (6-10)	SRR023197 RNA Library from S2 control cells	GSM239050 fly heads, beta-eliminated	SRR023399 RNA bound by P19 protein	GSM467730 r2d2	S26 1st instar #2	GSM467731 loq	GSM239041 fly heads, non beta-eliminated	GSM180333 late embryo (12-24)	S25 1st instar #1	SRR001346 ago2 beta-eliminated	GSM246084 D. melanogaster adult male heads 454	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	GSM280086 WT ovaries (AGO2IP)	GSM424741 S2 pKF63 transiently transfected	GSM424740 S2 pKF63 stably transfected	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	SRR001342 WT_males beta-eliminated	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries
..............TCTTTAACTATAGTTTCCTTCTAAATC.........................................................................................................	27	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AATCTAGCCTCTACTAGGCTTTGTCT...................................................................................	26	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................ATCTAGCCTCTACTAGGCTTTGTCT...................................................................................	25	1	64	0	0	1	1	3	0	2	4	1	0	1	0	3	2	2	2	0	1	1	0	4	1	1	0	2	1	0	0	1	1	6	0	1	0	0	1	2	0	1	0	0	0	0	0	0	2	0	0	0	0	1	0	0	1	0	0	0	3	0	0	1	1	0	2	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................ATCTAGCCTCTACTAGGCTTTGT.....................................................................................	23	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................ATCTAGCCTCTACTAGGCTTTGTC....................................................................................	24	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................TCTAGCCTCTACTAGGCTTTGTC....................................................................................	23	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................TCTAGCCTCTACTAGGCT.........................................................................................	18	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................TCTAGCCTCTACTAGGCTTTGTCT...................................................................................	24	1	70	0	0	2	7	1	0	6	7	6	0	3	0	1	3	2	2	2	0	1	0	0	3	2	2	2	1	1	1	0	1	0	1	0	1	1	0	0	1	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	2	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................TCTAGCCTCTACTAGGCTTTGT.....................................................................................	22	1	5	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................CTAGCCTCTACTAGGCTTTGTCTG..................................................................................	24	1	3	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................CTAGCCTCTACTAGGCTTTGTC....................................................................................	22	1	90	0	0	2	2	7	0	4	2	1	0	5	2	2	4	5	3	6	1	0	0	6	2	1	3	3	4	2	2	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	7	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................CTAGCCTCTACTAGGCTTTGTCTGT.................................................................................	25	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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....................................................................................ACATAGCCTATAAGAGGTTAGGTG......................................	24	1	31	0	0	0	0	0	0	0	0	0	0	0	0	8	4	0	0	4	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................ACATAGCCTATAAGAGGTT...........................................	19	1	1350	39	14	172	4	3	14	21	19	13	3	31	6	2	3	13	3	0	15	33	4	4	16	5	6	4	13	29	11	17	1	59	8	17	24	0	7	36	37	16	2	3	12	5	2	0	15	1	1	2	2	1	3	8	0	0	0	6	6	0	26	4	24	14	3	1	3	8	0	12	1	16	2	38	6	0	13	4	0	14	7	2	3	10	1	0	0	3	3	19	23	0	0	27	43	1	12	3	0	13	2	25	0	4	0	0	0	0	5	1	3	1	0	0	1	0	2	2	0	31	0	0	2	60	0	1	1	0	0	0	3	0	0	0	0	2	4	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	24	0	0	0	0	13	0	3	2	1	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................ACATAGCCTATAAGAGGTTAGGT.......................................	23	1	9727	1072	689	145	119	83	201	112	129	205	99	58	73	197	168	77	76	124	111	92	197	210	74	41	91	33	72	126	29	131	64	62	67	166	194	136	56	117	111	146	17	42	91	194	116	65	135	112	209	85	28	39	0	14	35	27	34	28	21	39	20	10	154	54	86	49	66	59	16	135	26	24	40	96	45	12	13	64	8	49	5	94	34	31	70	17	106	25	42	62	67	17	12	125	42	15	16	8	26	27	51	28	8	5	1	33	8	22	37	28	29	32	29	3	5	2	7	25	18	15	5	0	6	67	5	3	13	11	0	3	3	8	3	4	7	0	7	2	0	2	0	1	6	0	1	1	5	0	5	0	0	0	2	2	0	2	0	0	0	0	1	5	0	0	0	0	1	3	0	0	0	0	4	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................ACATAGCCTATAAGAGGTTAGGTGT.....................................	25	1	4	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................ACATAGCCTATAAGAGGTTA..........................................	20	1	1749	333	236	65	6	3	70	22	40	17	31	11	7	20	17	10	3	12	8	9	11	15	9	1	2	2	8	10	3	0	4	25	5	6	7	14	0	18	9	6	9	1	5	3	14	10	74	44	12	21	2	3	1	10	2	16	9	3	6	7	26	24	3	9	3	1	1	3	4	6	3	7	2	26	5	1	6	2	0	6	0	2	2	0	17	1	1	2	12	9	6	2	1	21	18	1	1	4	9	6	0	2	0	1	0	4	5	8	4	8	0	0	7	0	0	0	0	0	1	3	0	0	1	3	21	0	1	1	0	1	1	1	2	0	1	77	0	0	1	0	1	0	3	0	0	0	2	0	2	1	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................ACATAGCCTATAAGAGGTTAG.........................................	21	1	60665	7814	5285	1473	220	254	2366	238	230	140	1236	100	305	4116	3620	136	96	2821	399	472	1256	4318	144	42	101	112	138	581	35	312	31	765	246	476	665	734	66	560	740	388	240	102	332	107	232	382	514	917	912	506	72	108	177	156	30	198	240	152	34	329	257	152	299	406	105	69	112	122	236	234	306	33	73	1183	118	172	182	81	90	435	120	79	10	44	440	216	122	217	38	273	371	179	9	474	544	51	22	119	357	79	132	263	89	66	51	24	168	127	193	175	123	25	326	0	4	3	55	81	65	147	0	97	60	142	274	1	90	35	11	35	3	75	29	1	25	81	29	46	24	13	34	0	36	50	0	0	39	1	9	14	2	3	0	21	3	0	1	1	0	0	2	11	2	5	0	0	0	8	2	0	1	0	4	10	6	0	3	5	0	0	0	4	0	0	0	0	0	0	0	0
....................................................................................ACATAGCCTATAAGAGGTTAGG........................................	22	1	287322	28021	13933	3006	1648	1626	13009	4009	3642	4914	6607	2697	1566	7338	6439	1709	1504	5037	2905	2581	7661	7882	1551	1049	1590	648	1236	3423	991	2890	1597	1414	1482	3844	4026	1598	1132	1574	4141	3968	464	998	2979	13457	1129	1131	1415	3667	3129	1941	819	1094	117	364	2208	445	799	1138	800	673	1383	570	2426	3030	1774	958	1895	1043	768	2583	1049	6983	827	2018	1337	816	323	1690	709	2045	175	3167	506	377	1302	824	848	1242	1835	1923	1995	766	964	1520	1733	161	4346	246	710	854	1080	992	579	223	108	408	390	310	637	928	1194	2453	377	36	35	69	126	547	260	1631	900	500	97	648	721	1421	149	230	71	201	743	154	112	184	60	8	98	336	90	27	33	258	61	398	297	297	137	113	283	48	206	18	240	37	57	16	188	188	7	39	26	20	119	70	125	27	101	9	10	78	88	66	13	21	8	30	7	8	23	0	14	8	10	7	0	3	0	1	0	0
.....................................................................................CATAGCCTATAAGAGGTTA..........................................	19	1	46	19	4	0	0	0	2	1	0	0	2	0	0	3	3	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................CATAGCCTATAAGAGGTTAGG........................................	21	1	1797	222	117	11	4	3	86	14	7	8	70	6	2	29	27	8	1	20	7	7	89	22	4	1	1	0	9	5	4	5	3	9	2	3	6	9	7	13	5	12	0	0	6	87	11	13	18	23	15	13	2	2	4	24	15	25	5	2	0	5	0	3	0	20	2	0	2	3	3	3	6	83	0	23	2	14	0	1	2	7	1	29	0	0	4	7	10	0	22	17	9	4	11	45	7	7	48	1	0	6	2	2	4	0	6	3	6	4	0	11	5	6	7	0	0	3	1	3	2	5	10	0	1	6	0	66	2	4	7	3	8	4	1	0	0	0	0	21	1	1	0	3	0	0	3	3	0	1	5	0	4	0	1	0	1	0	2	2	0	1	2	0	27	0	1	1	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................CATAGCCTATAAGAGGTTAG.........................................	20	1	359	83	51	1	0	0	30	0	0	0	16	1	0	4	7	0	0	0	0	0	15	1	0	0	0	0	0	0	0	3	0	3	0	1	1	18	0	0	0	0	0	0	1	0	9	6	4	17	12	7	0	0	1	0	0	0	4	0	0	0	0	0	0	4	0	0	0	0	2	0	6	0	0	0	0	2	0	0	0	1	0	0	0	0	0	6	0	0	1	0	0	2	0	0	5	0	0	0	4	0	0	0	1	0	8	0	1	5	0	6	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................CATAGCCTATAAGAGGTTAGGT.......................................	22	1	74	13	6	0	0	0	0	0	0	0	1	0	0	3	2	0	0	10	0	0	2	4	1	0	0	1	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	1	0	1	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	6	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................CATAGCCTATAAGAGGTT...........................................	18	1	22	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................CATAGCCTATAAGAGGTTAGGTG......................................	23	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................ATAGCCTATAAGAGGTTAGGTGTA....................................	24	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................ATAGCCTATAAGAGGTTAG.........................................	19	1	826	240	85	3	0	0	24	0	0	0	15	0	2	78	69	0	0	45	2	0	25	77	2	0	0	0	0	1	0	0	0	0	0	1	0	9	0	1	0	0	2	0	0	0	0	4	0	0	30	4	1	0	0	10	0	0	2	0	0	0	6	0	1	6	1	0	0	0	0	2	1	0	0	11	0	0	0	0	0	2	0	0	0	0	0	23	0	0	0	5	1	2	0	4	7	0	0	0	1	0	0	1	6	0	0	0	2	0	0	6	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................ATAGCCTATAAGAGGTTA..........................................	18	1	62	36	8	0	0	0	7	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................ATAGCCTATAAGAGGTTAGGT.......................................	21	1	18	1	2	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	2	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................ATAGCCTATAAGAGGTTAGG........................................	20	1	1178	124	75	6	1	4	34	6	2	6	22	4	5	89	70	2	2	69	5	7	32	87	5	0	3	4	2	6	2	4	0	16	2	3	2	6	2	5	5	8	3	3	11	18	10	4	3	3	10	7	0	3	0	0	3	7	6	5	0	0	12	0	4	15	2	2	4	3	0	9	4	35	2	29	1	1	0	1	0	14	0	1	0	0	5	15	0	3	12	15	12	1	0	11	4	0	19	1	0	5	3	3	6	2	0	0	2	0	2	5	5	2	1	0	0	0	1	3	0	7	0	0	0	5	17	4	1	2	16	1	7	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	1	0	3	1	1	0	2	1	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................ATAGCCTATAAGAGGTTAGGTGT.....................................	23	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................TAGCCTATAAGAGGTTAGGTGT.....................................	22	1	15	4	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................TAGCCTATAAGAGGTTAGGTGTA....................................	23	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................TAGCCTATAAGAGGTTAGG........................................	19	1	312	81	21	2	1	0	14	0	0	0	4	0	5	10	9	0	1	11	4	0	16	7	0	0	2	0	1	1	0	0	0	1	1	1	4	2	0	0	6	1	0	1	3	5	0	1	1	4	3	0	3	2	0	14	1	0	1	1	0	1	2	0	0	7	1	0	1	0	0	1	0	1	1	6	1	3	0	1	2	1	0	0	0	0	0	2	0	6	1	2	0	0	0	2	0	0	0	0	1	0	1	1	4	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	6	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................TAGCCTATAAGAGGTTAG.........................................	18	1	107	27	13	1	0	0	4	0	0	0	2	0	0	5	4	0	0	3	0	0	3	3	0	0	0	0	0	1	0	0	1	4	0	1	1	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	8	7	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................TAGCCTATAAGAGGTTAGGT.......................................	20	1	9	1	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................AGCCTATAAGAGGTTAGGT.......................................	19	1	11	1	2	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................AGCCTATAAGAGGTTAGG........................................	18	1	494	120	59	0	0	0	26	0	0	0	14	0	0	25	35	0	1	22	0	0	21	21	0	0	0	0	0	0	0	0	0	0	1	2	4	15	0	0	5	1	0	0	3	1	0	22	1	6	1	0	0	2	0	0	0	0	1	0	0	2	0	0	0	8	0	0	0	0	3	0	2	2	0	0	0	6	1	0	0	0	0	0	0	0	0	3	0	0	0	0	0	8	0	1	1	0	1	1	13	0	0	0	3	1	0	0	7	5	0	1	0	0	5	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................GCCTATAAGAGGTTAGGT.......................................	18	1	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................TATAAGAGGTTAGGTGTACCAAGGC.............................	25	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................GTTAGGTGTACCAAGGCGAA..........................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................TGTACCAAGGCGAACAATCAGCGAAA..............	26	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................TGTACCAAGGCGAACAATCAGCGAA...............	25	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................TGTACCAAGGCGAACAATCAGCGA................	24	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................ATCAGCGAAAACGGAATCGATTAC	24	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Antisense strand

	Size	Blast	Total	S32 s2+48 #2	S31 s2+48 #1	V076 ML-DmBG3-C2	GSM379057 Krimp Mutant	GSM379065 Zuc Heterozygote	S28 0-2d pupae	V025 S2R+ cell	V008 S2-DRSC	V010 MLDmD20c5	S27 0-1d Pupae (w)	V020 S2R+ cell	GSM379064 Vasa Mutant	OSS6 Drosophila OSS cell small RNA libraries, rep2	OSS2 Drosophila OSS cell small RNA libraries, rep1	V024 kc167 cell	GSM379051 Armi Mutant	OSS7 Drosophila OSS cell small RNA libraries, rep3	SRR014277 Ovary_rep1 NA_P	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	S19 2-4day pupae #1	OSS8 Drosophila OSS cell small RNA libraries, rep4	V026 1182-4H cell	V021 ML-DmD21 cell	GSM379054 Flam Heterozygote	GSM379056 Krimp Heterozygote	V033 CMEW1 Cl.8+ cell	SRR014275 Ovary_rep1 LK_P	V019 GM2 cell	V088 r2d2[1] ovary total RNA	V009 CMEL1	SRR029028 untreated (mock)	SRR014273 Ovary_rep1_Har_P	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	S30 s2-48 #2	V028 CMEW1 Cl.8+ cell	V067 S2-NP	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	SRR032094 ago2 knockdown	GSM379063 Vasa Heterozygote	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	SRR031696_2152	S15 S2 -48 #1	SRR029633 total small RNAs from hen1 homozygous flies	S35 KC+48 #2	S33 KC-48 #2	S34 KC+48 #1	GSM379053 Aub Mutant	GSM379052 Aub Heterozygote	GSM280085 WT testes (18-24nt)	SRR029029 dcr-1 knockdown	SRR031692 Total small RNAs from Oregon R	SRR029033 lacZ knockdown	S8 S2-48,+48, KC-48, +48 mix	GSM379050 Armi Heterozygote	V018 Kc167 cell	S9 0-1h #3 (7)	SRR029030 dcr-2 knockdown	SRR029032 r2d2 knockdown	V097 CS ovary	S17 3rd inster #1	GSM379060 SpnE Heterozygote	GSM379061 Squ Heterozygote	GSM379066 Zuc Mutant	GSM379055 Flam Mutant	S10 2-6h #1 (8)	V098 dcr-2[L811fsX] ovary	S14 0-1hr #1 (A)	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	GSM379067 SpnE Mutant	GSM280088 S2cell (AGO1IP)	GSM379062 Squ Mutant	S18 3rd inster #2	V083 male, one day	GSM379058	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	V063 CS,ovary,AGO1IP	V084 female, one day	SRR031701 Total small RNAs from r2d2 heterozygous flies	V011 Sg4	GSM379059	S29 male head #1	S21 disk #2	SRR031703 Total small RNAs from r2d2 homozygous flies	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	SRR031697 Total small RNAs from dcr-2 heterozygous flies	V066 r2d2[1], ovary, AGO1IP	V065 dcr-2[L811fsX], ovary, AGO1IP	S20 2-4day pupae#2	SRR001338 IR non-beta-eliminated	SRR029031 loqs-ORF knockdown	SRR032093 ago1 knockdown	GSM280084 loqs-/- ovaries (18-29nt)	SRR031693_4	GSM280083 dcr-2-/- ovaries (18-29nt)	S24 male body #2	SRR014282 Ovary_rep1 wK_P	SRR014280 Ovary_rep1 w1118_P	V064 ago2[414], ovary, AGO1IP	S5 imaginal disc	GSM280082 WT ovaries (18-29nt)	S11 2-6h #2 (9)	SRR031699 Total small RNAs from dcr-2 homozygous flies	S23 female body #2	S13 6-10h #2 (11)	V081 embryo 2-6hr	S16 KC -48 #1	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	S22 female head #1	SRR001664 homozygous dcr-2_untreated	SRR001347 ago2 untreated	SRR001349 heterozygous dcr-2_untreated	V001 IR-	V089 ago2[414] ovary total RNA	S12 6-10h #1 (10)	GSM280087 S2cell (AGO2IP)	SRR001345 ago2 non-beta-eliminated	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	V002 IR+	SRR032095 AGO1 IP dcr2 knockdown	SRR032092 mock oxidized	GSM239051 S2 cells, beta-eliminated	V082 embryo 14-24hr	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	SRR010959 Ago3 IP in heterozygotes	GSM180334 larvae: 1st instar and 3rd instars	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	S2 female head	S4 female body	SRR001343 dcr-2 non-beta-eliminated	GSM180337 tissue culture cells (S2 only)	GSM343287 Drosophila Toll 10b mutant embryos	V090 CS  male total RNA	GSM239052 S2 cells, non beta-eliminated	GSM180335 imaginal discs	GSM180331 early embryo (2-6)	S1 male head	SRR001344 dcr-2 beta-eliminated	S3 male body	GSM424739 S2 parental	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	V075 ML-DmBG1-C1	SRR010951 Ago3 heterozygotes, oxidized	SRR032096 AGO2 IP dcr2 knockdown	GSM180330 very early embryo (0-1)	SRR010960 wt, oxidized	S7 12-24hr embryo	SRR001340 IR beta-eliminated	GSM180328 adult heads (female heads, male heads)	SRR010954 Aub trans-heterozygotes, oxidized	SRR010958 Piwi IP in Ago3 trans-heterozygotes	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023407 RNA bound by NLS-P19 protein	SRR001348 ago2 oxidized	SRR010953 Aub heterozygotes, oxidized	SRR010956 Piwi IP in Ago3 heterozygotes	GSM467729 WT	SRR023402 total RNA extracted from NLS-P19 cells	SRR010952 Ago3 trans-heterozygotes, oxidized	SRR001337 WT_females beta-eliminated	SRR010955 Aub IP in Ago3 heterozygotes	SRR023400 total RNA extracted from P19 cells	GSM180329 adult bodies (female bodies, male bodies)	GSM180332 mid embryo (6-10)	SRR023197 RNA Library from S2 control cells	GSM239050 fly heads, beta-eliminated	SRR023399 RNA bound by P19 protein	GSM467730 r2d2	S26 1st instar #2	GSM467731 loq	GSM239041 fly heads, non beta-eliminated	GSM180333 late embryo (12-24)	S25 1st instar #1	SRR001346 ago2 beta-eliminated	GSM246084 D. melanogaster adult male heads 454	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	GSM280086 WT ovaries (AGO2IP)	GSM424741 S2 pKF63 transiently transfected	GSM424740 S2 pKF63 stably transfected	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	SRR001342 WT_males beta-eliminated	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries
.CAAATCCCACCGTTCTTTAA.............................................................................................................................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...AATCCCACCGTTCTTTAACTAT.........................................................................................................................	22	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....TCCCACCGTTCTTTAACT...........................................................................................................................	18	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........CACCGTTCTTTAACTATAGTT.....................................................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................CTTCTAAATCTAGCCTCTACT..............................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................AATCTAGCCTCTACTAGGCTTTG......................................................................................	23	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................TCTAGCCTCTACTAGGCTTTGT.....................................................................................	22	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................ACTAGGCTTTGTCTGTGCATTCGAAA.......................................................................	26	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0