Page generated on Fri Oct 15 12:01:07 2010

dme-mir-2a-2




dme-mir-2a-2

View dme-mir-2a-2 on miRBase
miRNALengthPerfect(sense)Perfect(antisense)5' moR5'armLoop3'arm3' moROtherLoop SizeMatureStar
dme-mir-2a-2121163870971333070377160799305861516079930307037


TTCCTTACCTGTACGATGTTGATTATCTAAGCCTCATCAAGTGGTTGTGATATGGATACCCAACGCATATCACAGCCAGCTTTGATGAGCTAGGATAATCAACGGGAGACAACGTAAATGA
........................((((.(((.((((((((((((((((((((((........).)))))))))))))..))))))))))).)))).........................-32.90
...........((((..(((((((((((.(((.((((((((((((((((((((((........).)))))))))))))..))))))))))).))))))))))).(....)..)))).....-50.90
Sense strand
                                                                                                                         SizeBlastTotalV098 dcr-2[L811fsX] ovaryV064 ago2[414], ovary, AGO1IPV065 dcr-2[L811fsX], ovary, AGO1IPV097 CS ovarySRR032095 AGO1 IP dcr2 knockdown V088 r2d2[1] ovary total RNA  V018 Kc167 cellV063 CS,ovary,AGO1IPV021 ML-DmD21 cellV011 Sg4V066 r2d2[1], ovary, AGO1IPV082 embryo 14-24hrV026 1182-4H cellV008 S2-DRSCV076 ML-DmBG3-C2V009 CMEL1V020 S2R+ cellGSM424740 S2 pKF63 stably transfected V067 S2-NPV081 embryo 2-6hrV089 ago2[414] ovary total RNA  V033 CMEW1 Cl.8+ cellSRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb GSM280088 S2cell (AGO1IP) V024 kc167 cellV025 S2R+ cellSRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb S33 KC-48 #2V001 IR-SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1 V019 GM2 cellV002 IR+V028 CMEW1 Cl.8+ cellSRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1 SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1 SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb SRR014280 Ovary_rep1 w1118_P SRR029031 loqs-ORF knockdown SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1 GSM379052 Aub Heterozygote SRR014275 Ovary_rep1 LK_P SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1 GSM379063 Vasa Heterozygote V010 MLDmD20c5GSM379066 Zuc Mutant SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb GSM379057 Krimp Mutant S32 s2+48 #2SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb GSM379050 Armi Heterozygote GSM379054 Flam Heterozygote SRR014277 Ovary_rep1 NA_P SRR014273 Ovary_rep1_Har_P SRR031696_2152 GSM379051 Armi Mutant GSM379064 Vasa Mutant SRR029028 untreated (mock) GSM424739 S2 parental GSM379065 Zuc Heterozygote V090 CS  male total RNA  GSM379060 SpnE Heterozygote SRR029032 r2d2 knockdown SRR014282 Ovary_rep1 wK_P S29 male head #1GSM379058 SRR029033 lacZ knockdown V083 male, one daySRR029030 dcr-2 knockdown SRR001345 ago2 non-beta-eliminated GSM379056 Krimp Heterozygote S35 KC+48 #2S31 s2+48 #1GSM379053 Aub Mutant GSM379062 Squ Mutant GSM379061 Squ Heterozygote V084 female, one dayS34 KC+48 #1SRR029029 dcr-1 knockdown SRR032094 ago2 knockdown SRR029633 total small RNAs from hen1 homozygous flies S30 s2-48 #2SRR031703 Total small RNAs from r2d2 homozygous flies OSS6 Drosophila OSS cell small RNA libraries, rep2 OSS2 Drosophila OSS cell small RNA libraries, rep1 S13 6-10h #2 (11)SRR031697 Total small RNAs from dcr-2 heterozygous flies SRR031699 Total small RNAs from dcr-2 homozygous flies S12 6-10h #1 (10)GSM379067 SpnE Mutant S16 KC -48 #1SRR031701 Total small RNAs from r2d2 heterozygous flies V075 ML-DmBG1-C1OSS7 Drosophila OSS cell small RNA libraries, rep3 GSM379055 Flam Mutant SRR031692 Total small RNAs from Oregon R SRR032093 ago1 knockdown GSM280084 loqs-/- ovaries (18-29nt) SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies GSM280082 WT ovaries (18-29nt) S22 female head #1OSS8 Drosophila OSS cell small RNA libraries, rep4 S28 0-2d pupaeGSM280083 dcr-2-/- ovaries (18-29nt) GSM424741 S2 pKF63 transiently transfected SRR001338 IR non-beta-eliminated GSM280085 WT testes (18-24nt) S10 2-6h #1 (8)S24 male body #2S8 S2-48,+48, KC-48, +48 mixGSM379059 SRR001347 ago2 untreated SRR001344 dcr-2 beta-eliminated SRR001664 homozygous dcr-2_untreated SRR001341 WT_males non-beta-eliminated SRR001339 WT_females non-beta-eliminated S9 0-1h #3 (7)S15 S2 -48 #1SRR001349 heterozygous dcr-2_untreated S27 0-1d Pupae (w)SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies SRR032096 AGO2 IP dcr2 knockdownSRR031693_4 GSM343287 Drosophila Toll 10b mutant embryos SRR032092 mock oxidized SRR001343 dcr-2 non-beta-eliminated S2 female headS14 0-1hr #1 (A)S23 female body #2S1 male headS21 disk #2S19 2-4day pupae #1S7 12-24hr embryoS11 2-6h #2 (9)SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies S5 imaginal discSRR010954 Aub trans-heterozygotes, oxidized GSM280087 S2cell (AGO2IP) GSM239052 S2 cells, non beta-eliminated SRR010953 Aub heterozygotes, oxidized GSM467730 r2d2 GSM467729 WT SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies GSM180328 adult heads (female heads, male heads) S26 1st instar #2S25 1st instar #1SRR001348 ago2 oxidized SRR010959 Ago3 IP in heterozygotes S17 3rd inster #1GSM180332 mid embryo (6-10) S4 female bodyGSM180333 late embryo (12-24) S18 3rd inster #2GSM467731 loq S3 male bodyS20 2-4day pupae#2SRR001346 ago2 beta-eliminated GSM239041 fly heads, non beta-eliminated SRR001337 WT_females beta-eliminated GSM180331 early embryo (2-6) GSM180337 tissue culture cells (S2 only) GSM180335 imaginal discs SRR010955 Aub IP in Ago3 heterozygotes SRR023400 total RNA extracted from P19 cells SRR010956 Piwi IP in Ago3 heterozygotes GSM180329 adult bodies (female bodies, male bodies) SRR010958 Piwi IP in Ago3 trans-heterozygotes GSM180330 very early embryo (0-1) GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day GSM180334 larvae: 1st instar and 3rd instars SRR010960 wt, oxidized GSM239050 fly heads, beta-eliminated SRR023399 RNA bound by P19 protein SRR001340 IR beta-eliminated GSM239051 S2 cells, beta-eliminated GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006) GSM246084 D. melanogaster adult male heads 454 SRR010952 Ago3 trans-heterozygotes, oxidized SRR001342 WT_males beta-eliminated SRR010951 Ago3 heterozygotes, oxidized SRR023197 RNA Library from S2 control cells GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries SRR010957 Aub IP in Ago3 trans-heterozygotes SRR023407 RNA bound by NLS-P19 protein GSM280086 WT ovaries (AGO2IP) GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries SRR023402 total RNA extracted from NLS-P19 cells GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0 GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries
...CTTACCTGTACGATGTTGATTATC..............................................................................................2411000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......ACCTGTACGATGTTGATTATCTA............................................................................................2311000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ACCTGTACGATGTTGATTATCTAA...........................................................................................2412000000000000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CCTGTACGATGTTGATTATCTAA...........................................................................................2311000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CTGTACGATGTTGATTATCTAAG..........................................................................................2311000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CTGTACGATGTTGATTATCTAA...........................................................................................2216000000000000000000000100000000000000000000000000000000000000000000000030000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGTACGATGTTGATTATCTAA...........................................................................................2113000000000000000000000000000010000000000000000000000000010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GTACGATGTTGATTATCTAAG..........................................................................................2111000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GTACGATGTTGATTATCTAA...........................................................................................2014000000000000000000000100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000
...........TACGATGTTGATTATCTAAG..........................................................................................2012000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TACGATGTTGATTATCTAA...........................................................................................19111100000000000000100000000000000000000000000000003000000000000000000000020000010000200000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AAGCCTCATCAAGTGGTTGT.........................................................................20127302100020100000000000002001000000001001000010010000000000000000000000100000000030002000000000000000120000000000000000000001000010000000000000000000000000000000000000000000000000000000000000
............................AAGCCTCATCAAGTGGTTG..........................................................................1915000000000000010000000000000010000000000000000000000000100000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AAGCCTCATCAAGTGGTTGTGA.......................................................................221458401300311902280810301200412360001301220422303120220114138104010200720202136020140015716751157153722070800601830071830101011030211060000620320072000004501000001100000002100000000000000000000000000000
............................AAGCCTCATCAAGTGGTTGTGATAT....................................................................2511000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
............................AAGCCTCATCAAGTGGTT...........................................................................1812000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AAGCCTCATCAAGTGGTTGTGATATG...................................................................26133000000000001110000020300000700000000000000010000000000000000000000000000020000000011201500000000000000000010100000000000000000000000000000000110000000000000001000000000000000000000000000000
............................AAGCCTCATCAAGTGGTTGTGATA.....................................................................24110200000020150202010003010000080000101100100000010100100500000010100010002000000002011123011610101010000030001002000000000010000000000000000000010000000010010000000010000000000000000000000000000
............................AAGCCTCATCAAGTGGTTGTG........................................................................211500000000000000101000000000011300000101001110000315000010020000000000000010000000002010100002000010020000000010000000010000021000200000000000000000000000000000000000000000000000000000000000000
............................AAGCCTCATCAAGTGGTTGTGATATGGATACC.............................................................3211000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
............................AAGCCTCATCAAGTGGTTGTGAT......................................................................231831101020431925785700710100075079109153001007055054612900032542030511001010101129171000110016172425247187550810318021003022252090203410000004022000020200414211000044111102060120010000104000100000000000000000000000
.............................AGCCTCATCAAGTGGTTG..........................................................................18115000000000000020020000000000100000000000000000002000000000000000300000011000000000000000000002000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AGCCTCATCAAGTGGTTGTGATAT....................................................................24130000000000000000000000000000500000000000000000003000000000000000000000000000000002001811004000000000010001001000000000000000000000010000000001000000000000000000000000000000000000000000000000
.............................AGCCTCATCAAGTGGTTGTGATATG...................................................................251570000000011000010000200000005000110201000000000020000000000000002000000000000000030105001500000000000001000030100000000010000000010310001000000000000010000000001000000000000000000000000000000
.............................AGCCTCATCAAGTGGTTGT.........................................................................19134000000000000101000000000100100011000000000010002000000010000000000000001000000016013000000000001000101100014000000000000001000000010000000000000000000010000000000000000000000000000000000000
.............................AGCCTCATCAAGTGGTTGTG........................................................................2018400000000000001001000000000010000000000000000000012000000000000000700000031000070604000001004000000010302000002100000032000002002121200001000000000000200000000000000000000000000000000000000000
.............................AGCCTCATCAAGTGGTTGTGATA.....................................................................2311661441091147210661015112406290500713314480081634190102310901219201042200300101032000000558791000280074547723554281015105020042124330011100760002002190100000005116091851626000003122400292430120003230000000100000000000000000000
.............................AGCCTCATCAAGTGGTTGTGA.......................................................................211925300110110200030530200301121710002200310400500210580102054210000100381140650413800014600262324104311321412726010010202302711900913321100110013140129080013792770163010002471000311020220000010011000000010011000000000010
.............................AGCCTCATCAAGTGGTTGTGAT......................................................................2212086718924451941843910102090285118840012415350133261432321602211490200501033700200911287010180002150332022258161015803214218119108114224610744027901010015241261301008991131615310861000183223005110362220002130005000020010000000000000000
..............................GCCTCATCAAGTGGTTGTGATATGGA.................................................................26114000100000000000000010100000000200000000000000002000000000000000000000000000000000000000300040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCCTCATCAAGTGGTTGTGATATGGATAC..............................................................2911000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..............................GCCTCATCAAGTGGTTGTGATA.....................................................................221495731582263233561121492721412476793172623601032921124644061278031856961084361293138726432415052187158557225163865526714121741158922749544689359221094823819538725981415179861513232411512131221715358317181519956120173196275269167817689238211101011656223893182134602270210375110211213791324493491354423734656181187125827654512970271241875613135108027203623472111322206765138393881312057141400061691522014021010000000000
..............................GCCTCATCAAGTGGTTGT.........................................................................18149411010031411678122140411013002124211560413705201011112070210021012000011000207000274001470018802601017065010150130631000351400000015210297500010101002201100005101000100000000000000000000000000000000000000000
..............................GCCTCATCAAGTGGTTGTGATAT....................................................................2312270000012000001100002200001501700011000002000000102100000300000010050000007150000100471021040381900000000002200002412000000101100100001001100130000013100000010003000000010000000000000000000000000000
..............................GCCTCATCAAGTGGTTGTGATATGGAT................................................................2712000000000000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCCTCATCAAGTGGTTGTG........................................................................19116600000000000004114010000012018100000100000010010090000000030010000000000310001200142021231005201002024012100000020000000000601011100010100010000012303100100000100000000000000000000000000011000000
..............................GCCTCATCAAGTGGTTGTGATATGG..................................................................2513000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000
..............................GCCTCATCAAGTGGTTGTGATATG...................................................................2414813316211154233144332014100730121120526115441000012150312600001000201006060016119130001600045101152336070500140004230000220410001110011000000300221602000010000100010001000001200000010000000000000000000000
..............................GCCTCATCAAGTGGTTGTGATATGGATACC.............................................................3011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCCTCATCAAGTGGTTGTGAT......................................................................2117613737286689361460225050563570124943051121571017479088144715354787231514240123120755680264579462010115916171312301914722744312322153354261052232805419516310657218081481135127567403195156115640704274421496171230045694322280014623193629145292312235161100136131618268653510230005604013110223100000020000100010
..............................GCCTCATCAAGTGGTTGTGA.......................................................................201224515610934956440143965150931116116267721024795400121518282610121322342941144110036132410001025002395623262213269013132015234201251727700302103607140031116040928417807253214035511901342000012010000000000000000000010000000000000000000
...............................CCTCATCAAGTGGTTGTG........................................................................181272100000060121083291500501100512210706164001012206120101103010210101207030000000732011703148342143038101610104121502005293210380220002000218128657840006005220025050330121011500000011102000001000000052113001000000000000
...............................CCTCATCAAGTGGTTGTGATATGGATA...............................................................2711000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................CCTCATCAAGTGGTTGTGATATGGATAC..............................................................2813000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000
...............................CCTCATCAAGTGGTTGTGAT......................................................................20123664187105106603351388675713644106712418993821261328361692795661893025144855524093610610107441739513268271411519266183221215814815381624958284591630671928720274525193662682311532791723562126003194145632215176019347229481108906214210873311115260613317541811037106544261202176583953221220013448510214319948136380181011141410855113362300070001327123006050011000000
...............................CCTCATCAAGTGGTTGTGATAT....................................................................221126627039122200241441101313001211566112423193705541002350100191110030213438193612251700258932699101116141153011317115022420771121770060156311010011624442250434252655710303013142122100021112100004112000002003000000000000000000
...............................CCTCATCAAGTGGTTGTGATATGGATACC.............................................................2911000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CCTCATCAAGTGGTTGTGATA.....................................................................2111969081083489792665386489133711301986946653551232924290261515511470246430259104265474265244901616865441130685264905729560911122259870816851786411811707819412191965829829392031850153296820445788148173339831757731277827849151750741178035131124190852051151435129734762533133183525482770411110691220222276321516025550431295284911033057186432692388333210331010190613982931382325331555801685129211373926158754499294958647028275084680124330146571416024820632611592381993921711291721284116991435301100414036941502919412320331000000010
...............................CCTCATCAAGTGGTTGTGA.......................................................................1919163221010134464185361913654503324684071161042280323186737944265744441138383353580727215393071726171333124528111643083131353631313272230637444112235455544244112097143253111411308434168215328425840220912891124326363405620211001020261103000000000000114057013030000000000
...............................CCTCATCAAGTGGTTGTGATATGGA.................................................................25112100000000000001000010000000000000000000000000001000020000000000000000002000000000000000000001000100000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000
...............................CCTCATCAAGTGGTTGTGATATG...................................................................231377525211755151427114128163851102975213320821215790819162111424732215012515424129103242241534555336021623128611290331371152243020101143636283735206213746914603475333336642613222186171670062265920102225114810521360150484068302460611182531110312105210001330012000041109005000000000000
...............................CCTCATCAAGTGGTTGTGATATGGAT................................................................26114000001000000000000010000000000010000000010010000000000000000000000000001000000000022000000011000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000
...............................CCTCATCAAGTGGTTGTGATATGG..................................................................2418100100000000000000000000000000000000000000000000000020000000000000000000000000200000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000
................................CTCATCAAGTGGTTGTGA.......................................................................18197000000000000100000000100000000020100000000010000000000000000000000000000000000030020002000010000300700100010000000100000020720000000000030100000100000000000000000000000000000000000000000000000
................................CTCATCAAGTGGTTGTGAT......................................................................1911831022000100000000001200410100100020010100020000013001000030000030000000000000100456022080001903041024000000200000000000010233100110000000010000000200000000000000000000000000000000000000000000000
................................CTCATCAAGTGGTTGTGATATGGATACCCA...........................................................3011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CTCATCAAGTGGTTGTGATATG...................................................................22120432210323325441230206915024803502371504340211414190000110000220010000802000101100000111020000030113020000000000000000000005130000000000000020000201000000000000000000000000000000000000000000000
................................CTCATCAAGTGGTTGTGATAT....................................................................21124001000000000000000010000000000000010000000000001000000003000000000000031000000050000000000100000000110000001000000010001020000000000000000000000000000000000000000000000000000000000000000000
................................CTCATCAAGTGGTTGTGATA.....................................................................20110651147683241436274130613059514284116062295725606113226113031316201601101033206000213201101150021200141232405010101401117017824581020444010000926235375242012110206200100001420130000301120008000001000000000006000000000000
.................................TCATCAAGTGGTTGTGAT......................................................................18123200000000000001000010002000200010000000000000003000000000000000000000001010000000000200200000000010000000000101000000000020000000000000000000000000000000000000000000000000000000000000000000
.................................TCATCAAGTGGTTGTGATA.....................................................................1912040111131010231001203212000203030144000064000000101400001100000100060000009400009000150101205050000000160001100042201000003013160000102110010000000200000000000000000000000000000000000000000000000
.................................TCATCAAGTGGTTGTGATATG...................................................................211117451601240210224120731105010000051002001006001131000201002021020220070122000000000001000000000000010000100000100000000002020000000000040000000000200000100000000000000000000000000000000000000
.................................TCATCAAGTGGTTGTGATAT....................................................................20115100000000000100000000000000300000000000000000002000000000000000000001000000000000101010000000010000000000000000010000110000000000000000000000000000000000000000000000000000000000000000000000
..................................CATCAAGTGGTTGTGATATG...................................................................20117100000000000000000010090100000000000011010000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................CATCAAGTGGTTGTGATA.....................................................................181344022320001023110010320400430295222601381640011101017200102016001000180010021711000118002400085050510101210351002000040100000024030080000001031012010200302100000000000000000000000000000000000000000000
..................................CATCAAGTGGTTGTGATAT....................................................................1914000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ATCAAGTGGTTGTGATATG...................................................................1914000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
...................................ATCAAGTGGTTGTGATATGGAT................................................................2212000000000000000000100000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TCAAGTGGTTGTGATATGGATACC.............................................................2411100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................TCAAGTGGTTGTGATATG...................................................................1812000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AGTGGTTGTGATATGGATA...............................................................1911000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GTGATATGGATACCCAACGC.......................................................2012000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................ATGGATACCCAACGCATA....................................................1813000000000000000000000000000000000000000000000001000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
...................................................ATGGATACCCAACGCATAT...................................................1911000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TGGATACCCAACGCATATC..................................................1911000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
....................................................TGGATACCCAACGCATAT...................................................1812000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000
.............................................................AACGCATATCACAGCCAGCTTTGATGAGCTA.............................3111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..............................................................ACGCATATCACAGCCAGCTTTGATGAGC...............................2811000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................ACGCATATCACAGCCAGCTTTG.....................................2212000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CGCATATCACAGCCAGCTTTGAT...................................2311000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
...............................................................CGCATATCACAGCCAGCTTTGATGA.................................2511000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CGCATATCACAGCCAGCTTTGATGAGCTA.............................2911000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................GCATATCACAGCCAGCTTTGATGAGCT..............................2721000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CATATCACAGCCAGCTTTGATGAGCTA.............................2714100000000000000000001000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CATATCACAGCCAGCTTTGATGAGCT..............................2624100000000000000000000000000000100000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CATATCACAGCCAGCTTTGATGAG................................2422000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000000000000000000000000
.................................................................CATATCACAGCCAGCTTTGATGAGC...............................2523000000000100001000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................CATATCACAGCCAGCTTTGAT...................................2121000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................ATATCACAGCCAGCTTTGATGAG................................23216700100101110002002001020000222001000110010000000027001000000000201600000091300001160014010701101001000000000000134210000040100000001201100000000010000000000100000000000000010000000000010000000000
..................................................................ATATCACAGCCAGCTTTGATGAGC...............................24210401010000210112011000020000117002100110001100000015001010000000060600000045000030007101010100001000000204000001000000010030000000000000000000000000000010000000000000000100000000000000000000000
..................................................................ATATCACAGCCAGCTTTGAT...................................2023000000000000000000000000000000000000000000000001000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..................................................................ATATCACAGCCAGCTTTGATGA.................................2227500000000000000000010010000012000000000000101000030000010000000001700000026000020002000000005101000000216000000000000001000000000010000001002100030000000000000100000000000000000000000000000000
..................................................................ATATCACAGCCAGCTTTGATGAGCTA.............................26117300000000000020000000000002000000001002010001000020000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..................................................................ATATCACAGCCAGCTTTGATGAGCT..............................252468852338113116219377211041729001405447162212026142118213503160110202042119102000721311117000922312111302002120100127000033000000002020000000200221000001000000000100000000001000010000000000000000000000000
..................................................................ATATCACAGCCAGCTTTGA....................................1944000000100000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000
..................................................................ATATCACAGCCAGCTTTGATG..................................21247000000000000101000000000000700000000000000000006000000000000000100000030000030010013000003001000000004000020001000000000000001003121000000000000000000000000000000001000000000000000000000000
...................................................................TATCACAGCCAGCTTTGATGAG................................22249955769066420926545626918673482888953132921811553211355924127754110822032371061818028012232199038662747219878634329416421104828244112254971265324001468285421708581836394921013170228282792468195038241808326402140330517481875520222552658147612632567107725592083202697072330150976914354555190192709166204113929134167249198517401909465916525592529321853183336721981392167711526844511131315244839951174586563472299851049763755012226121917481079954950695137513751836963671145922693685070109943310373747473312655854991213162042868127005698324723018376563117134131155662929749671737316614410826019174871271195936468632833913377100000
...................................................................TATCACAGCCAGCTTTGATGAGCTAGGA..........................281210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137000000000001000000000000000000000000000000000000
...................................................................TATCACAGCCAGCTTTGATGAGCTA.............................251478394496933229425497415542830258945398234314685686816370317642743885121350574442031616398151011464162801401911320213979161863646811498741723852772391632265642696013729277086844778774367311038153923510698540146434613514326722382748292016505114398692849883506163333110108302754163218930891112342821246640714746551129078122957173817154659252514675516293534573011112641963002691714141462322271161202599201525161091846140561393742515636831190105022442101348130000000100000100000001
...................................................................TATCACAGCCAGCTTTGATGAGCTAGGATAATCA....................34110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000055000000000000000000000000000000000000000000000000
...................................................................TATCACAGCCAGCTTTGATGAGCT..............................242622139543336829102023328920997022529422700415863820395713042116408219455030391016530110821318934510572197881405191103381813681074041025576874466458567956702529639289858197266554328996758046535607995901840154594995832151910426165061446458424342815738063308134334013408232623471534757415613676922077338883532835439146737365265802680626098296634161239171978535568234171676722199734788991967020656243952835764781835515592791567561018077677559905359005348936610302416368151691858779249630076578801169535922005010297049621597470657267395717843684318726842651119611967931408268115351151802623570974649256467735112579921310132860489563442586971001272072772883744202554471743261593283210243231361671741511093217934993854411014318112115042311251201
...................................................................TATCACAGCCAGCTTTGATGAGCTAGGATAA.......................3118000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062000000000000000000000000000000000000000000000000
...................................................................TATCACAGCCAGCTTTGATG..................................20340143112551493856684294160254306621525917071110334251011140231325011540318655320329403552362182329244448875535346273383210116142137606651191443851048784109451531332665114234163584711146254326112163319319669860856870173310773780097151063526156202735982593359204051736222462698463124385229242343737336297188135931016660713919723936697183389714218853331841016191061420291363767826414028013537261105016016970635405120011000000
...................................................................TATCACAGCCAGCTTTGATGA.................................21211393735618249030617262894334665017981996663227761596782477352491289630781308711433108652092161697123138927614284161205275170521129487179102256457479114222171116723312524027541192142149316784903128235853336975162221829671231206944177439252434212178500822292225467206619522937816723250791959612233122655936208595489538101177113023101110476112112717111081493493814735891468381918135010445504374375183842911411042212362127301167689249215837412095792292385924160521114115425594343025372917161911021213571050000000000
...................................................................TATCACAGCCAGCTTTGATGAGCTAG............................261230142011100729177223171401451902090062122220022316213103211110000100000140000100010000001000120201000000000000000100000000000000000000000000000000125000000000002000000000000000000000000000000000000
...................................................................TATCACAGCCAGCTTTGATGAGC...............................2324251087835444049094697163457601512139722214421155352338181312326581680620427169054145255824961739462832031199897264893334121401441277215496169750262707978275826481266121438101490177519468127227715832558722131512206300514921479449125341712118513018247822004153021672787176019811415788317115374916515918601040121697239612031136415172682116548114971112019261965140089814158005993893108012924427817844455723861073407311455171582057190865570863251017381738496466539598191220598152764602661812151803123511772176793785454447010795857231955106971372923454737658310311058891778377140312413302317838491033060100
...................................................................TATCACAGCCAGCTTTGATGAGCTAGG...........................271170100001000000000000000000010000000000000000100000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000101000000000000000000000000000000000000000000000000
...................................................................TATCACAGCCAGCTTTGA....................................18596432219271310091212233551015127452164174001416977631212985443356038208304404975275787129256714191017363924565700232601013236877322207213120152382141134338234344923161942224161826132644503213115102810325577462318180013244170212264209001215800064012115320000000300000020000004900000010002000000000
...................................................................TATCACAGCCAGCTTTGATGAGCTAGGAT.........................2912000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000
...................................................................TATCACAGCCAGCTTTGATGAGCTAGGATAATCAA...................3515000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032000000000000000000000000000000000000000000000000
...................................................................TATCACAGCCAGCTTTGAT...................................193110252654601520626754767323771542857012644073348559022071848525237423313618626332030921639926183112612302538211197701876144822462317246472014414723166138612573135935020422612125113156140304171807109271810331391203238015745241243339104410712126348171191529100115111324820196123275536233567001106648912013050212010000001000000140020024060000000000
...................................................................TATCACAGCCAGCTTTGATGAGCTAGGATAATC.....................3312000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000
...................................................................TATCACAGCCAGCTTTGATGAGCTAGGATA........................3014000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031000000000000000000000000000000000000000000000000
....................................................................ATCACAGCCAGCTTTGATGAGCTAGG...........................2611000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ATCACAGCCAGCTTTGATGAGCT..............................23225398166692872776215565225357335465585581649332566289332438856191933522127516799621124710218230413465295141213118155102206137759622112310910678115924674979160191866924601061325922747528617924916182367579335195127286513764548235475148436335154659285154761311963910195022191015871811991988116001210224537332054001000301010112001002002000001000000000000000000000
....................................................................ATCACAGCCAGCTTTGATGA.................................2026580421800210000552100000011021910100010000112010001400010810100020006700074305130000312821858481151200733040220000145100220270051323354340004082049010022000032320300001011103000000000000100000000000000000000
....................................................................ATCACAGCCAGCTTTGATGAGCTA.............................2419905736331298563133290440232377362167384202351692713365133239714785120501242198950102506711516012086817599443525452845461453747483940291851341605030436538673425242231217213364195001470242572727731922823220922297800163053211162240100000430322600000012301100111000010000000001010000000000000000000000
....................................................................ATCACAGCCAGCTTTGAT...................................18342000040000000110000000000000300010000000002000001000002000000000100000000000000021211010000302010000000002000101000000000000000000000010300400000000000000000000000000000000000000000000000000
....................................................................ATCACAGCCAGCTTTGATG..................................193270312030102000013100000100000160020000000000403100500010110000000003600001011400003031201164013180192050400007630050070000000100100000070510000001013000000010101001110000000100000000010000001000000000
....................................................................ATCACAGCCAGCTTTGATGAGCTAG............................2514000000000101000000000000000000000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ATCACAGCCAGCTTTGATGAGC...............................22216853511171914953275897818261461474740348480333922124174459146310011234723323650055331619901417103161974136332532341517041112262752122553512146321432371032032201204424240000040111002020001000001200001101300001102000000100000000000000000000
....................................................................ATCACAGCCAGCTTTGATGAG................................21214391461171888271623104462933134761153713415420814324040231621031049212003821902231801500134313431363010230211122032288323193312122413301223231904288212603411515530600020105121800102200801770433001113010001010001000100000000000000000000000
.....................................................................TCACAGCCAGCTTTGATGAGCTAGGATA........................2811000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.....................................................................TCACAGCCAGCTTTGATG..................................18341802302191822141779372110411500410663319520010052223120008920062389500011001067420701303430001324011222333121851091721503049013055308259282230127510917354213718185614262030100415532410394051645151051126851101410130100800213103520000500000030100021000000000000
.....................................................................TCACAGCCAGCTTTGATGAGCTAGGA..........................26140000000000100001020000000000000101020001000000000000107000000000000002000000000020110010000100020001000000010000210000000000000000000000100031000000000002000010000000000000000000000000000000
.....................................................................TCACAGCCAGCTTTGATGAGCT..............................22241340352691603185431993241157882208401027561433031403211191689239411663854716817097373494637594396614515038585077185925282660035439868159936913295584211420020298192896634356341972454923452226193140621838450621768823441214963724522708179331799620392187941446424034182871654516539186792703715979176342949770985155613108712014259261200058111197125940173292467323270125981042188941107696156805106347795140951507874224768109342360253532325375623519825505476065533784204648635537542756211934304128812871989413468254857175111222810277729683752461934172812281210981510268512675320545713588210590675374657865970794569554854221458399218014114315544231838092253127207202173651992004435934171915443299193842531370178661131202309099600000
.....................................................................TCACAGCCAGCTTTGATGAGCTAGG...........................251194163301401131204141500600110001140120243002014000100000102000000000000000101000000400002425100004010200121000000000000000000000000110000300001024170000000000011000000000000000000000000000000000000
.....................................................................TCACAGCCAGCTTTGATGAGCTAGGATAATCA....................3213000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000001000000000000000000000000000000000000
.....................................................................TCACAGCCAGCTTTGATGAGCTAGGATAAT......................3012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000
.....................................................................TCACAGCCAGCTTTGATGAG................................20257814342781786127337147873600975104024412049223366751137745521172234220170793612016470391266671251613151163311544127336866761364107790746451074065230978591351737832232207227917302299623977834426439622519572352301748693698134904895914932096931481571144021953166624241137724423231199926391943312127105439269343714714243542241154513343826313421191071043504610227701616826410241235472291236035522426161311940101619550545117018203534620440221077001000
.....................................................................TCACAGCCAGCTTTGATGAGCTAGGATAATCAAC..................3411000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.....................................................................TCACAGCCAGCTTTGATGAGCTAGGATAATC.....................3113000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000
.....................................................................TCACAGCCAGCTTTGATGAGCTAG............................2415334651309877235628673225219613267170252223674049402729611141441801534327443404053844987543304536813938294333353823261041302078269393329031542171176222219113011283452317211819101432213431041610141751300583820000371200000115210212040028070500021011000019110010006300000000200000000000000000
.....................................................................TCACAGCCAGCTTTGATGAGC...............................21211476621071682176592767183347309094689428877132820185941121934364875281678197350819729381154312517672187257437413734082633015036136456116571321493032516133992253542229590390466203253388238029046613227641625777927930822551129219428107424410941730339181851321078977762941120986011451226325145221281241234405623310161206151981646813115084042881143692402034168683366249530290462918918266201314175962311044538618324538493701121471505866123496356667816410647582017205728242753202511755272511413622031510547304327160216011000000
.....................................................................TCACAGCCAGCTTTGATGAGCTA.............................23136953772437402217191600711831776600015645018081110142116194814697711153940586904917555920633104624121218527734938125937602793971248017267645278353918553251599626277324963607129412505113281633374292133068913392291892812224169146372693428436258902223120596149302558325247246061738020117726423200195387798419417410118571778380521492226191704083533981611991713151583483611528315058116622961455735933849791485471912881311614822192865731281164046510190510525706546390042001326702855843243644933079185346262512411893291560919733818318311101911300134720337851464091466021250730180959101183610471398870110318001261668126914962914815277283223188207191140197257722130909421463330184033360310362630203200931100
.....................................................................TCACAGCCAGCTTTGATGAGCTAGGATAA.......................2911000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.....................................................................TCACAGCCAGCTTTGATGAGCTAGGAT.........................2713000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000
.....................................................................TCACAGCCAGCTTTGATGAGCTAGGATAATCAACG.................3516000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000051000000000000000000000000000000000000000000000000
.....................................................................TCACAGCCAGCTTTGATGA.................................1922016242217017541241544157323129144777542012481206289211931350406354595153989881211017404125422408920143812100189651133159602906584011421012110658138411411835747051244594218637823826775839106204941439242311245854440346346311227298981401080168247974213436253925730339142276343619048344202301701312331535217000001000000192160012260000000000
......................................................................CACAGCCAGCTTTGATGAG................................1923550200722101132171310110000002000210122002401100017500133010200000351011380220010300121412622226000508070110473002501001417710000000002103000300001021101100000000000100000000000000000000000000000000
......................................................................CACAGCCAGCTTTGATGAGCTAGG...........................24110000000002000000000010000000000010000000000000000000002000000000000100000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......................................................................CACAGCCAGCTTTGATGAGCTAGGA..........................2513000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
......................................................................CACAGCCAGCTTTGATGAGCTA.............................221647329923120223130714728528622322511911786323481812557305655661316366100744156425861816225475841452837392338343813592527224036762018244614251519221121692136151719261522239140591997229255324914510517764162695003264331422263104122205531224012041020600200100000101100100100100000000100000000000000
......................................................................CACAGCCAGCTTTGATGAGCT..............................212756824628721590760791466021191151181485894944511089248502857451613836447846285838223133512098261930801619242415451012103211316101710314712327672773715759114159134447111018292948498323134201415698996154652015602311961713602830812518311117173418317004172340213930022012113431010101413000000000000100000000000000000000
......................................................................CACAGCCAGCTTTGATGAGC...............................2025525146112272114112541516904002513441100101412109062462201111421354711600212271610901411112691296111301836100508180000671101002011322210200001050002000000602000011101000000101000000000000000002000000000000000
......................................................................CACAGCCAGCTTTGATGAGCTAG............................2319931000071551311103412120200202033110003000001313000010002010000100020001000010000000000002010000000000010000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
......................................................................CACAGCCAGCTTTGATGA.................................182170000080200002030000210000010000100000000003000000000001800000000013000050010100003164630077000503080000420002003001914400010000011110001010300400002000000000000010000000000000000000000000000000
.......................................................................ACAGCCAGCTTTGATGAGCTAG............................22157001100302110120250120000002000000406001100202200000010000010043010000000110000000001000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................ACAGCCAGCTTTGATGAGCTA.............................211400652448200014971193401916149313891292109997783370676215176110230560410401317714505465430918218646726420139097056990248010146961749323461123062962326215420552536396332274242977502379653157307051344827732330126538450034020283010403331525326313142429174173313402549200002144010110210114230000001000000230000303304100000000000000000000000000000000000000000
.......................................................................ACAGCCAGCTTTGATGAGCTAGG...........................2312000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................ACAGCCAGCTTTGATGAGC...............................192701081928632141424584327270696919944666240274046201259113301258811201877220307411844132603036149427946108896056178103894551749143140411085137629311181224242167476562413200262231560373205311901878124014123289018045011251101212100100002050000000000310100101005100000000000001110200000000000101000000000
.......................................................................ACAGCCAGCTTTGATGAG................................182536322881059429113103130172538903326619810702611836352985599008391341335534167291438125658179651046768145691245237417055230406102204181011254244910454269404872601921213003537058013019165187210241761180943002111031111000101006700000000100000001040014000000000000003030100000000000000000000000
.......................................................................ACAGCCAGCTTTGATGAGCT..............................20284145352143443224113324027722452316318921600217826351704142714021061129701829854440123311652566743808102214786109955567948015831228135810028091131112912521224112427011551032754115458838961125883361889709523066628488941061308823503764011534984940959010001940259143814204336201484861418279362875436174188419801590214045121012111319151500201270248800012110110331000102205000000003050004510100000200000100000100000
........................................................................CAGCCAGCTTTGATGA.................................1622000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000
........................................................................CAGCCAGCTTTGATGAGCTAG............................211100000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................CAGCCAGCTTTGATGAGC...............................182263210371372229135280020000416004320434704131110031000084210600010231720200300010003117140268001010330020804011000000211001000000100000000004001000000000000000000000000001200000000090000000000000
........................................................................CAGCCAGCTTTGATGAGCT..............................19223965073422723327153272073170148251318012338222548557242941127710495327353471491211221646544937144863053540124941238270325961351496312121978310078612102001631701000010011100000000000001012002010100002000100000000000000000000000000090000000000000
........................................................................CAGCCAGCTTTGATGAGCTA.............................20110022444371330198146122142026221534616423184037281651125212611181962112719140291517138124792226500321130200226100020122312020000310008260600001000000003000000000000000000000000100002000000000000000000000000000030000000000000
........................................................................CAGCCAGCTTTGATGAG................................1723000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000
.........................................................................AGCCAGCTTTGATGAGCTAG............................201398171061737311187423270050203002142250491517111601111282321014314406702401011304060100000060000000000000040000000007000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................AGCCAGCTTTGATGAGCTAGG...........................2112001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................AGCCAGCTTTGATGAGCT..............................1821506566423717340155281114426221161373584940861523098184866814912222172754519614417215101112122893414453164327428461110516942049462822313545192510401140416968445100609219172011661314214262414152965127132119133216861016717463050313015011031404000010011002200020000001100200000011000000010000000000000000000100000
.........................................................................AGCCAGCTTTGATGAGCTAGGA..........................2211000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................AGCCAGCTTTGATGAGCTAGGATA........................2411000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................AGCCAGCTTTGATGAGCTA.............................19120377128951240211703851319984748261263364587561616401472222586745544360436957516536617153343503956372131156582100582207961515733038702191076832725445471043706050927141711679386718533372911049281151434181161118123216108143110191107309870111422200000980511780012002512325010260000003300301020000000000000000000000000000000000000
..........................................................................GCCAGCTTTGATGAGCTAGGA..........................2111000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GCCAGCTTTGATGAGCTAG............................1915053033334571011741753247067432424223010416181316617113147711112201910310100630010208030000200031000000000000020000105005000100000010000000000200000000000000000000000000000000000000000000000000000000000000000000
..........................................................................GCCAGCTTTGATGAGCTA.............................181154051240315204119718711958230880261352936936522968090240251762424342219273713223516154303544275421268575011064481771211117630513761211058435327130442759074085509958552405413332403330512311134313720143813341331204512520108204800207222002000101507300000210153133090031203600300030000000000000000000000000000000000000
..........................................................................GCCAGCTTTGATGAGCTAGG...........................2013001000000000000000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CCAGCTTTGATGAGCTAGG...........................19144201110110011100010010000001010001022005111100010011100300000104010000200000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CCAGCTTTGATGAGCTAG............................18190047161238628151411272374111408417127181724811242382939844345211381122030168713182541200120120911120213353000400000012030000207307000200000110000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CCAGCTTTGATGAGCTAGGA..........................2011000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TGAGCTAGGATAATCAACGGGA..............2211000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................GGATAATCAACGGGAGACAACGTAAA...2611000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................GGATAATCAACGGGAGAC...........1812000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................GGATAATCAACGGGAGACA..........1911000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................ATAATCAACGGGAGACAACGTA.....2211000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Antisense strand
                                                                                                                         SizeBlastTotalV098 dcr-2[L811fsX] ovaryV064 ago2[414], ovary, AGO1IPV065 dcr-2[L811fsX], ovary, AGO1IPV097 CS ovarySRR032095 AGO1 IP dcr2 knockdown V088 r2d2[1] ovary total RNA  V018 Kc167 cellV063 CS,ovary,AGO1IPV021 ML-DmD21 cellV011 Sg4V066 r2d2[1], ovary, AGO1IPV082 embryo 14-24hrV026 1182-4H cellV008 S2-DRSCV076 ML-DmBG3-C2V009 CMEL1V020 S2R+ cellGSM424740 S2 pKF63 stably transfected V067 S2-NPV081 embryo 2-6hrV089 ago2[414] ovary total RNA  V033 CMEW1 Cl.8+ cellSRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb GSM280088 S2cell (AGO1IP) V024 kc167 cellV025 S2R+ cellSRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb S33 KC-48 #2V001 IR-SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1 V019 GM2 cellV002 IR+V028 CMEW1 Cl.8+ cellSRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1 SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1 SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb SRR014280 Ovary_rep1 w1118_P SRR029031 loqs-ORF knockdown SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1 GSM379052 Aub Heterozygote SRR014275 Ovary_rep1 LK_P SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1 GSM379063 Vasa Heterozygote V010 MLDmD20c5GSM379066 Zuc Mutant SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb GSM379057 Krimp Mutant S32 s2+48 #2SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb GSM379050 Armi Heterozygote GSM379054 Flam Heterozygote SRR014277 Ovary_rep1 NA_P SRR014273 Ovary_rep1_Har_P SRR031696_2152 GSM379051 Armi Mutant GSM379064 Vasa Mutant SRR029028 untreated (mock) GSM424739 S2 parental GSM379065 Zuc Heterozygote V090 CS  male total RNA  GSM379060 SpnE Heterozygote SRR029032 r2d2 knockdown SRR014282 Ovary_rep1 wK_P S29 male head #1GSM379058 SRR029033 lacZ knockdown V083 male, one daySRR029030 dcr-2 knockdown SRR001345 ago2 non-beta-eliminated GSM379056 Krimp Heterozygote S35 KC+48 #2S31 s2+48 #1GSM379053 Aub Mutant GSM379062 Squ Mutant GSM379061 Squ Heterozygote V084 female, one dayS34 KC+48 #1SRR029029 dcr-1 knockdown SRR032094 ago2 knockdown SRR029633 total small RNAs from hen1 homozygous flies S30 s2-48 #2SRR031703 Total small RNAs from r2d2 homozygous flies OSS6 Drosophila OSS cell small RNA libraries, rep2 OSS2 Drosophila OSS cell small RNA libraries, rep1 S13 6-10h #2 (11)SRR031697 Total small RNAs from dcr-2 heterozygous flies SRR031699 Total small RNAs from dcr-2 homozygous flies S12 6-10h #1 (10)GSM379067 SpnE Mutant S16 KC -48 #1SRR031701 Total small RNAs from r2d2 heterozygous flies V075 ML-DmBG1-C1OSS7 Drosophila OSS cell small RNA libraries, rep3 GSM379055 Flam Mutant SRR031692 Total small RNAs from Oregon R SRR032093 ago1 knockdown GSM280084 loqs-/- ovaries (18-29nt) SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies GSM280082 WT ovaries (18-29nt) S22 female head #1OSS8 Drosophila OSS cell small RNA libraries, rep4 S28 0-2d pupaeGSM280083 dcr-2-/- ovaries (18-29nt) GSM424741 S2 pKF63 transiently transfected SRR001338 IR non-beta-eliminated GSM280085 WT testes (18-24nt) S10 2-6h #1 (8)S24 male body #2S8 S2-48,+48, KC-48, +48 mixGSM379059 SRR001347 ago2 untreated SRR001344 dcr-2 beta-eliminated SRR001664 homozygous dcr-2_untreated SRR001341 WT_males non-beta-eliminated SRR001339 WT_females non-beta-eliminated S9 0-1h #3 (7)S15 S2 -48 #1SRR001349 heterozygous dcr-2_untreated S27 0-1d Pupae (w)SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies SRR032096 AGO2 IP dcr2 knockdownSRR031693_4 GSM343287 Drosophila Toll 10b mutant embryos SRR032092 mock oxidized SRR001343 dcr-2 non-beta-eliminated S2 female headS14 0-1hr #1 (A)S23 female body #2S1 male headS21 disk #2S19 2-4day pupae #1S7 12-24hr embryoS11 2-6h #2 (9)SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies S5 imaginal discSRR010954 Aub trans-heterozygotes, oxidized GSM280087 S2cell (AGO2IP) GSM239052 S2 cells, non beta-eliminated SRR010953 Aub heterozygotes, oxidized GSM467730 r2d2 GSM467729 WT SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies GSM180328 adult heads (female heads, male heads) S26 1st instar #2S25 1st instar #1SRR001348 ago2 oxidized SRR010959 Ago3 IP in heterozygotes S17 3rd inster #1GSM180332 mid embryo (6-10) S4 female bodyGSM180333 late embryo (12-24) S18 3rd inster #2GSM467731 loq S3 male bodyS20 2-4day pupae#2SRR001346 ago2 beta-eliminated GSM239041 fly heads, non beta-eliminated SRR001337 WT_females beta-eliminated GSM180331 early embryo (2-6) GSM180337 tissue culture cells (S2 only) GSM180335 imaginal discs SRR010955 Aub IP in Ago3 heterozygotes SRR023400 total RNA extracted from P19 cells SRR010956 Piwi IP in Ago3 heterozygotes GSM180329 adult bodies (female bodies, male bodies) SRR010958 Piwi IP in Ago3 trans-heterozygotes GSM180330 very early embryo (0-1) GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day GSM180334 larvae: 1st instar and 3rd instars SRR010960 wt, oxidized GSM239050 fly heads, beta-eliminated SRR023399 RNA bound by P19 protein SRR001340 IR beta-eliminated GSM239051 S2 cells, beta-eliminated GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006) GSM246084 D. melanogaster adult male heads 454 SRR010952 Ago3 trans-heterozygotes, oxidized SRR001342 WT_males beta-eliminated SRR010951 Ago3 heterozygotes, oxidized SRR023197 RNA Library from S2 control cells GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries SRR010957 Aub IP in Ago3 trans-heterozygotes SRR023407 RNA bound by NLS-P19 protein GSM280086 WT ovaries (AGO2IP) GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries SRR023402 total RNA extracted from NLS-P19 cells GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0 GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries
................TGTTGATTATCTAAGCCTCAT....................................................................................2111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000