Page generated on Fri Oct 15 12:01:10 2010

dme-mir-2b-2




dme-mir-2b-2

View dme-mir-2b-2 on miRBase
miRNALengthPerfect(sense)Perfect(antisense)5' moR5'armLoop3'arm3' moROtherLoop SizeMatureStar
dme-mir-2b-2132857562825869147932108184206882337228420688147932


TCTCATCGAATCGAAACAGGAGAATTGTGTCATTCTTCAAAGTGGTTGTGAAATGTTTGCCTTTTTATGCCTATTCATATCACAGCCAGCTTTGAGGAGCGACGCGATGCTCAAGGCAAAAAAAAAATCAAT
........................(((((((.(((((((((((((((((((.(((...((........)).....))).))))))))).)))))))))).))))))).........................-36.90
...................(((.((((((((.(((((((((((((((((((.(((...((........)).....))).))))))))).)))))))))).)))))))).)))....................-43.60
Sense strand
                                                                                                                                    SizeBlastTotalV098 dcr-2[L811fsX] ovaryGSM424740 S2 pKF63 stably transfected V081 embryo 2-6hrSRR032095 AGO1 IP dcr2 knockdown V097 CS ovaryV065 dcr-2[L811fsX], ovary, AGO1IPV064 ago2[414], ovary, AGO1IPV063 CS,ovary,AGO1IPV076 ML-DmBG3-C2V021 ML-DmD21 cellV066 r2d2[1], ovary, AGO1IPV011 Sg4V009 CMEL1V088 r2d2[1] ovary total RNA  V082 embryo 14-24hrV026 1182-4H cellV067 S2-NPV008 S2-DRSCV089 ago2[414] ovary total RNA  V018 Kc167 cellV020 S2R+ cellSRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb SRR029031 loqs-ORF knockdown V025 S2R+ cellV028 CMEW1 Cl.8+ cellV033 CMEW1 Cl.8+ cellV090 CS  male total RNA  SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1 SRR014280 Ovary_rep1 w1118_P SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1 S33 KC-48 #2V019 GM2 cellSRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1 SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1 SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb GSM280088 S2cell (AGO1IP) V024 kc167 cellV001 IR-SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb SRR014275 Ovary_rep1 LK_P V002 IR+SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1 GSM379052 Aub Heterozygote GSM379057 Krimp Mutant SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb GSM379066 Zuc Mutant SRR032093 ago1 knockdown GSM379054 Flam Heterozygote GSM379050 Armi Heterozygote SRR031696_2152 SRR014273 Ovary_rep1_Har_P GSM379065 Zuc Heterozygote S32 s2+48 #2SRR029028 untreated (mock) V010 MLDmD20c5GSM379063 Vasa Heterozygote SRR014277 Ovary_rep1 NA_P GSM379051 Armi Mutant V083 male, one daySRR014282 Ovary_rep1 wK_P GSM379064 Vasa Mutant GSM379060 SpnE Heterozygote SRR029032 r2d2 knockdown GSM424739 S2 parental GSM379058 S31 s2+48 #1GSM379056 Krimp Heterozygote SRR029030 dcr-2 knockdown SRR029029 dcr-1 knockdown GSM379053 Aub Mutant V084 female, one daySRR029033 lacZ knockdown S35 KC+48 #2V075 ML-DmBG1-C1GSM379062 Squ Mutant SRR032094 ago2 knockdown S29 male head #1GSM379061 Squ Heterozygote SRR001345 ago2 non-beta-eliminated S30 s2-48 #2S34 KC+48 #1OSS6 Drosophila OSS cell small RNA libraries, rep2 OSS2 Drosophila OSS cell small RNA libraries, rep1 SRR029633 total small RNAs from hen1 homozygous flies SRR031699 Total small RNAs from dcr-2 homozygous flies SRR031703 Total small RNAs from r2d2 homozygous flies OSS7 Drosophila OSS cell small RNA libraries, rep3 SRR031697 Total small RNAs from dcr-2 heterozygous flies GSM379067 SpnE Mutant GSM280084 loqs-/- ovaries (18-29nt) S12 6-10h #1 (10)SRR031701 Total small RNAs from r2d2 heterozygous flies S13 6-10h #2 (11)S16 KC -48 #1GSM379055 Flam Mutant SRR031692 Total small RNAs from Oregon R OSS8 Drosophila OSS cell small RNA libraries, rep4 GSM379059 S15 S2 -48 #1GSM280082 WT ovaries (18-29nt) GSM280083 dcr-2-/- ovaries (18-29nt) S28 0-2d pupaeSRR001338 IR non-beta-eliminated GSM343287 Drosophila Toll 10b mutant embryos S22 female head #1S24 male body #2SRR001349 heterozygous dcr-2_untreated S8 S2-48,+48, KC-48, +48 mixSRR001347 ago2 untreated GSM280085 WT testes (18-24nt) SRR032096 AGO2 IP dcr2 knockdownSRR001664 homozygous dcr-2_untreated S10 2-6h #1 (8)GSM424741 S2 pKF63 transiently transfected S27 0-1d Pupae (w)SRR001341 WT_males non-beta-eliminated SRR001339 WT_females non-beta-eliminated SRR001344 dcr-2 beta-eliminated SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies S9 0-1h #3 (7)SRR001343 dcr-2 non-beta-eliminated GSM239052 S2 cells, non beta-eliminated S19 2-4day pupae #1S2 female headS21 disk #2S23 female body #2S14 0-1hr #1 (A)S5 imaginal discSRR010954 Aub trans-heterozygotes, oxidized S7 12-24hr embryoSRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies S1 male headS11 2-6h #2 (9)SRR032092 mock oxidized SRR010953 Aub heterozygotes, oxidized SRR010959 Ago3 IP in heterozygotes SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies SRR031693_4 GSM280087 S2cell (AGO2IP) SRR010956 Piwi IP in Ago3 heterozygotes S18 3rd inster #2GSM180328 adult heads (female heads, male heads) GSM180332 mid embryo (6-10) S17 3rd inster #1SRR010955 Aub IP in Ago3 heterozygotes GSM239041 fly heads, non beta-eliminated SRR001348 ago2 oxidized S4 female bodyS20 2-4day pupae#2GSM180337 tissue culture cells (S2 only) S26 1st instar #2S3 male bodyGSM180333 late embryo (12-24) SRR001337 WT_females beta-eliminated GSM180331 early embryo (2-6) S25 1st instar #1SRR001346 ago2 beta-eliminated GSM180335 imaginal discs SRR010958 Piwi IP in Ago3 trans-heterozygotes GSM467730 r2d2 GSM467729 WT SRR023400 total RNA extracted from P19 cells GSM180330 very early embryo (0-1) GSM180334 larvae: 1st instar and 3rd instars GSM180329 adult bodies (female bodies, male bodies) GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day GSM467731 loq SRR023399 RNA bound by P19 protein SRR010960 wt, oxidized SRR001340 IR beta-eliminated GSM239051 S2 cells, beta-eliminated SRR023197 RNA Library from S2 control cells SRR001342 WT_males beta-eliminated SRR010952 Ago3 trans-heterozygotes, oxidized GSM239050 fly heads, beta-eliminated SRR010957 Aub IP in Ago3 trans-heterozygotes SRR023407 RNA bound by NLS-P19 protein GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006) SRR010951 Ago3 heterozygotes, oxidized GSM246084 D. melanogaster adult male heads 454 GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries SRR023402 total RNA extracted from NLS-P19 cells GSM280086 WT ovaries (AGO2IP) GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0
..TCATCGAATCGAAACAGGA...............................................................................................................1911000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TCGAATCGAAACAGGAGAATTGTGTC.....................................................................................................2613000010000000000000000000000000000000000001000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CGAATCGAAACAGGAGAATTGTGTCA....................................................................................................2611001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AATCGAAACAGGAGAATTGTGTC.....................................................................................................2311000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AATCGAAACAGGAGAATTGTGTCA....................................................................................................2411001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATCGAAACAGGAGAATTGTGTCAT...................................................................................................2411000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ATCGAAACAGGAGAATTGTGTCA....................................................................................................23117109000000000002000010000100000000000000000001000000000010000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TCGAAACAGGAGAATTGTGTCA....................................................................................................22140105040001000000200311001111010010110002000001010000004000000000000000000001000000000000000100000000100000000000000020000000001000000000000000000000000000000000000000000000000000000000000000
...........CGAAACAGGAGAATTGTGTCA....................................................................................................211562016020000000101100204700320001001000010002003000000000010000000000100000000000000000000010000100000000000000200000000000000001000000000000000000000000000000000000000000000000000000000000000
............GAAACAGGAGAATTGTGTCA....................................................................................................20115840520610072001212211101511010030000010010101003600010104300000010000000000011000000000000000090710000000002000000004000000000100011000000000000000000000002000100000000000000000000000000000000
.............AAACAGGAGAATTGTGTCA....................................................................................................191526924801994042600133663011007281110825967272917748491019910222419173727343403772379212916771921642018114111214111569460119951401099164315075001000174641388000113309203002016043015000020011402091010050000000000020000001000000000000000000000000000000000000
.............AAACAGGAGAATTGTGTC.....................................................................................................1811001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AAACAGGAGAATTGTGTCAT...................................................................................................201562026050003000121110120010010000010000020200000000000000000000000000000000001000000000000000000000000000000000000002000000000000000000000000000000000000000000100000000000000000000000000000000
..............AACAGGAGAATTGTGTCAT...................................................................................................1918002000002000000120000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............AACAGGAGAATTGTGTCA....................................................................................................1812531001530100093001242220330213100001021202101000020000001020002100000002000100030500013000000000501000000100000000000000010000000000000000000000000000000000000000000000100000000000000000000000000
...............ACAGGAGAATTGTGTCAT...................................................................................................1811001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGGAGAATTGTGTCATTCTT...............................................................................................2011000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ATTCTTCAAAGTGGTTGTGAAATGT............................................................................2511000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ATTCTTCAAAGTGGTTGTGAAATG.............................................................................2419003000000000000000000000000000000000000000000000000001000000000000000000000000001000000010000000000000100000000001000000000000000000000000000000000000010000000000000000000000000000000000000
...............................ATTCTTCAAAGTGGTTGTGAAA...............................................................................2212000000000000000000000000000000100000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ATTCTTCAAAGTGGTTGTGAAAT..............................................................................2315000000000000000000000000000000200000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
................................TTCTTCAAAGTGGTTGTGA.................................................................................1912173360177233137966142930111316433214476154183921541110928421124410853531141164232457253713152130833021342535502522244101313466525542556811216801428403431012823576013210000014020002210001500010754820000000040000000000001110000003120010000000000000
................................TTCTTCAAAGTGGTTGTGAAATGTTT..........................................................................2616100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000002000000000000000000000000000000000000100000000000000000000000000000000
................................TTCTTCAAAGTGGTTGTGAAAT..............................................................................22124117143768525067513522202712102506110599884128220383263163331394001624593951183011219614061522888144421943416714749137999724188851391545831167133383700995611047214102126989489392175327516226175104188496317212556341831435514953516922145014122746226535248151733922290533634713616566156681135262703111109431331882230482101243572050029194983141511722143501411101641801112001110201002000000000000
................................TTCTTCAAAGTGGTTGTG..................................................................................18149800110000116000037110084205347820001402130600142001019210300103103000010002000110520000011264790112000617020232030000020012000000064000111001016000006212000010010000000000000010000001001000000000000000
................................TTCTTCAAAGTGGTTGTGAAA...............................................................................211100693851694821693429613397152304239254211371811106328697421018013613848664929205106931306378307045215626301014123132551275294810031428154912811557133130959515152665534075341394241158767162154171276310943103271031619565410576519810279427171523306608120140015150153516163022903155002231361621152112041220110400521100306000010000000100000
................................TTCTTCAAAGTGGTTGTGAAATG.............................................................................2319631141207851745230841071101126387410422797755494057762233609129315327513821184176876924271106886295684752478103414346310842251946421031655680777125132574874714458386733453043134828444788882185275653195384306263945822833935128149523224238220225922246338228836912939122419818237731333216759617317680159833145910039313211714830711412798127247194116717335652886687262629624113449732468601084701911184192210086634281916111720511345831124244880248319002510855164402072440240010000
................................TTCTTCAAAGTGGTTGTGAAATGTT...........................................................................251462010000000001110400000000000011000000001000010021000000000001000000200000010000100000200000000020000000000000100000000001000000000000000000000000000000000000000000000000000000000000000000000
................................TTCTTCAAAGTGGTTGTGAAATGTTTG.........................................................................2714000000002000000000000000000010000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TTCTTCAAAGTGGTTGTGAA................................................................................201294650057425174162410031110972410418114347191280621761151610282622323503243024843744682621638416103246326191121760528701512610086148625711211243435301059417103543528424531851020011400231010028116400843110031131111010000111000301000101100000000300000000
................................TTCTTCAAAGTGGTTGTGAAATGTTTGCCT......................................................................3012000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TTCTTCAAAGTGGTTGTGAAATGT............................................................................241103669689035713515112631137171321110174312500124211150050131411111426301212211153212120036005121062212145215212913330460121621101060001000203330001001105010000010002000002100000003010020100000000200001000000000000000000000
................................TTCTTCAAAGTGGTTGTGAAATGTTTGC........................................................................2819100000006000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
................................TTCTTCAAAGTGGTTGTGAAATGTTTGCC.......................................................................2913000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.................................TCTTCAAAGTGGTTGTGAA................................................................................19162103110004000000000000040120000200010100001001000100001100001000000000000040007000131003110002020120000001000100100010000000000000001000000000000000020000000000000000000000000000000000000000
.................................TCTTCAAAGTGGTTGTGAAATG.............................................................................221803534278152422327151183111103451231178621314310844721367262641442321191485644256746105101325110485793982299412332152212343379374482629532133344116520203221972223199332537196733112322141616292792731201852688178237111214112085101113885167810300008724411045831203421080015463318210526011115140910100103002001010000000000000000
.................................TCTTCAAAGTGGTTGTGAAATGTTT..........................................................................2511000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TCTTCAAAGTGGTTGTGAAA...............................................................................20150712015810466215401011054222071920110020151423301111001303211032113910003310831151400404612500439115033210342114613001068200350002020003100210010001100000001000000000000000000000000000000000000000000100000
.................................TCTTCAAAGTGGTTGTGAAATGTT...........................................................................2414100000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TCTTCAAAGTGGTTGTGAAATGT............................................................................23158207021220010001020002012200000300000100003000001000001000002000100100000000002002011101300000020010000000000000000000000000000010001000001000000000000000000000000000000001000000000000000000
.................................TCTTCAAAGTGGTTGTGA.................................................................................18137000200003000010000001030000000001000000010000000001001000000000000100000000000003021613100000000000100000010000300000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TCTTCAAAGTGGTTGTGAAAT..............................................................................211134386411607644423242669062119926061591440103221661312560341285878142410252214181884236945017112136005019761718321332323199152115111112843131207354721123240202020000002334222020000001102200201020011210110000000000000000000000000000000
..................................CTTCAAAGTGGTTGTGAAATGT............................................................................2211000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..................................CTTCAAAGTGGTTGTGAA................................................................................1813000000000000001000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CTTCAAAGTGGTTGTGAAATGTTTGC........................................................................2611000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CTTCAAAGTGGTTGTGAAA...............................................................................1919002000000000001000000000010000000000000010000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000
..................................CTTCAAAGTGGTTGTGAAATG.............................................................................21114240140300240000021300000750215014002001211130200220100013003001100000000003100001041001300420801001000100000000002000000000100010000030013000150000000000000000000000000000000000000000000000000
..................................CTTCAAAGTGGTTGTGAAAT..............................................................................20126104000000000000000000000010000000000000001001005000000100000000000000000700010000010000000000000000000001000000100000000000000000000000001000000000000000000000000000000000000000000000000000
...................................TTCAAAGTGGTTGTGAAATGT............................................................................2112000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TTCAAAGTGGTTGTGAAAT..............................................................................19137103100060000000000000030000000000200000001000012000000000000000200000000000040001011000100000000000000001000000000000000000000000002000000103000000000000000000000000000000000000000000000000
...................................TTCAAAGTGGTTGTGAAATGTT...........................................................................2212000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TTCAAAGTGGTTGTGAAA...............................................................................18127000010000000000000000600010000300000000001000006000000000000000000010000400000000010010000000000000000000000000000000000000000000001000000000000000000000000000000000000001000000000000000000
...................................TTCAAAGTGGTTGTGAAATG.............................................................................201215407271423110120200120119302101301002011232150200125100030010020150300230001000130101010030042000010000010100001000700000007010000000004000001982000000000000000000000000000000000000000000000000
....................................TCAAAGTGGTTGTGAAATG.............................................................................19283502020211020010111000220320100100100220101001006000223200010010000000000020100000030010010000040110200000210000000000000000000100002000001220000000001000000000000000000000000000000000000000
....................................TCAAAGTGGTTGTGAAAT..............................................................................18224101000000000000010000010010060200010001100001001000100001000010000000000000000001010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CAAAGTGGTTGTGAAATG.............................................................................183842013030011100025000001810110000001100300202300007010001300110010001005000010000100010000000000111001100000000000000000000000000000001000000010000000000000000010000000000000000000000000000000
.....................................CAAAGTGGTTGTGAAATGT............................................................................1916002000100000000000000000000000000010100000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AAAGTGGTTGTGAAATGT............................................................................1811000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AAAGTGGTTGTGAAATGTTTGCC.......................................................................2311000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AAGTGGTTGTGAAATGTTTGC........................................................................2111000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TGGTTGTGAAATGTTTGC........................................................................1811100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TGTGAAATGTTTGCCTTT....................................................................1813000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000
......................................................GTTTGCCTTTTTATGCCT............................................................1812000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GTTTGCCTTTTTATGCCTATT.........................................................2111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................GTTTGCCTTTTTATGCCTATTC........................................................2211000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TTTGCCTTTTTATGCCTA...........................................................1813000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
.......................................................TTTGCCTTTTTATGCCTATTCA.......................................................221956404112013122302412214301002011325910200010329021020111604172106200420034000000190704901815141714162151016727381113111109208911360345051107783031237461022153100058250012200013101200410000100011100000000000000010000
.......................................................TTTGCCTTTTTATGCCTATT.........................................................20118001000001000000000000000000000000010000000000000000000000000000000000000000000000000200000000000100000002000011000000006000000000000000000200000000000000000000000000000000000000000000000000
.......................................................TTTGCCTTTTTATGCCTAT..........................................................1912001000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TTTGCCTTTTTATGCCTATTC........................................................211750000200010000000000000000000002000000000000000000050000000000000002000000000000001103142100001101100000100001010020000025100000020001120002500000000001000000000000000000000000010000000000000
........................................................TTGCCTTTTTATGCCTATTCA.......................................................21117001000000000000000000000000000000000000000000002000000000000000000000000000006000000000000000000100000000000000000000005000000000000000000200000000000000000000000000000000000000000000000000
.........................................................TGCCTTTTTATGCCTATTCA.......................................................2013000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
.........................................................TGCCTTTTTATGCCTATTCATATCA..................................................2511000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..........................................................GCCTTTTTATGCCTATTCA.......................................................1913000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TTTTTATGCCTATTCATATCACAGCCAGC..........................................2911000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................TGCCTATTCATATCACAGCCAGCTTT.......................................2611000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................CCTATTCATATCACAGCCAGCTTT.......................................2411000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TATTCATATCACAGCCAGCTTTGA.....................................2421000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................ATTCATATCACAGCCAGCTTTGAGGAGCG...............................2924000000000000000000200000000000000000000000000000000000001000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TTCATATCACAGCCAGCTTTGAGG...................................2421000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
..........................................................................TCATATCACAGCCAGCTTTGAGGAGCG...............................2721100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CATATCACAGCCAGCTTTGAGGAGCG...............................26222400010000000010000000100000009000000000100010000000010000100011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CATATCACAGCCAGCTTTGAG....................................2121000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CATATCACAGCCAGCTTTGAGGAGC................................2521000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CATATCACAGCCAGCTTTGAGGAG.................................2425000000000000000000000000000000002000000000000000000000000100000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................ATATCACAGCCAGCTTTGAGGA..................................222450000000100000001010000000000001120000000000000000000003000000000000700000010000007410000000000010000000100100000000020000000000000000000000000000000000000000010000000000000000000000000000000
............................................................................ATATCACAGCCAGCTTTGAGGAGCGA..............................2611000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................ATATCACAGCCAGCTTTGAGGAGC................................2421441000020001020301200330000200001920110100001001010100001301100000000015100000300014108501000100090730000100100100100002000000000011110000000000000000200000000010000000000000000000000000000000000
............................................................................ATATCACAGCCAGCTTTGAGGAGCG...............................25220210611011010112410105980222000120200000103300010100002017000010000001110000002000600102100100100701510000100500310200004060000100301302010000000000011110001021000100000000000000000000000000000000
............................................................................ATATCACAGCCAGCTTTGAGGAG.................................2323383051175114110102360220020200004730140101001001310030114000010000021123105010170102300132241111120000370000700200030321010040000001210410000260030000010000200010100000000000000000000000000000000000
............................................................................ATATCACAGCCAGCTTTGAGG...................................21221000000001000000000000000000000200000001000000000000001000001000000100000010003000311000000000030000000000100000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................ATATCACAGCCAGCTTTGA.....................................1944000000000000000000010000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000
.............................................................................TATCACAGCCAGCTTTGAGGAGCGACGCGAT........................3111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.............................................................................TATCACAGCCAGCTTTGAGGAGC................................232160130911373833272273201306061071348633866825148267325079227253394904060131905241273738639655341242471936698413612524810391291432574720169137712204918943162321563121080109941131498671326216446237951399411336209751039215051152358017145641386723451356814494998891091493591519563118761135987081502297781024697688573755214328336746490344978782186866288843235025595610758613440772329705686334754235423406131722636435426863902321227762274264229003922279532341976229618911475142812361497494914161061120049817811928666608161114111452370258273946054343942553661841617571122249367178212318313548133225216190184155164142143132134199998116777809648649283784536363337221707181964104410236012100
.............................................................................TATCACAGCCAGCTTTGAGGAG.................................22233955711544203415342553116018662231164602143808141784937525957997982615496128959348112905147767815659833943437315330675020618739298052175431335324802965725711273613922735994334321695132800313132367810103307422320710100180072890623078253753135622816319523728208072919520588194022469420631201872046615767152681144718118173462056214006338641593415671149551188512153130516775959616713107501141210010137127149137368574125148455831510107106758010661686627694839521576815216167336802683453606325396440014495343033521797166935233286325033855073134529451862240224242965296526925111716175318678131527748130715017671265426887750950166854621977375447320329137301452494315401171255207246151264164152236125114898055903561462721041141420197711113321100
.............................................................................TATCACAGCCAGCTTTGAGGA..................................21216498010111372504265869122571296210586713760121955245689872399217016429518438278720184693101848496161069462647645887281801963225199756159324126831723438557587140934842717941427965062678943331679308127623639240348087749568134947122024536075183351884023592884360620214495531815153028172617163364179444991383157923232487342718415889721119882586367194383175826880864083169491436423975156742474714711268178210649212136288135251911056258402365164911813361364146103641472810253274511451713410178617311717981018562518741031000620000000
.............................................................................TATCACAGCCAGCTTTGAGGAGCGACGCGATGCTC....................3511000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................TATCACAGCCAGCTTTGAGGAGCGACG............................2713000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000
.............................................................................TATCACAGCCAGCTTTGAGGAGCGAC.............................26119720083111622515042100015740163312000005250016110101020104411011213000002000010000000001012011220000000110000010001000000000000000000000000000000000000000000000000000001300000100000000000000000000
.............................................................................TATCACAGCCAGCTTTGAG....................................19241261202164810471552731419333712126340420102310201765319030125142016575141051810117131871015887115383191176212372043997845222912120568602330391331101391365588159055541892546371924104130232867132810043305101012331282071067513909800302806100100301532000202000000310000022100000000100000000
.............................................................................TATCACAGCCAGCTTTGAGG...................................202268004430442162212319386115818138556149721233502396014401513145265114514716281656263522232925189621331511135017218029315142212186910224128397912827112111479825619085021493447187658045501138402666849715238562690726250581803755102424229917217417417032017121554676768118085362645511130632315531444947045521234801152921525430101075330738211132313422162293011110300000000
.............................................................................TATCACAGCCAGCTTTGAGGAGCGA..............................251598765226017883640395513941756107194911971122108295315809251215770453240613981126121890954888976620653734956581044562264559725466223672467173458357259553416285602943409164311739927122218737921052418317725589025789120174223159375129418217514610414240963913915532424940313018882792529723354193886142333522105144129351250910117098383673894171411117141101612020166039032522172121331231150318910000810201100000000000000
.............................................................................TATCACAGCCAGCTTTGA.....................................18596432201610091327193316455151017121274145291224064929207723508446087308531213344573875271679251617102453904179123668105260023203715716229212313371420433882341134234914161223224261072645432013114652818323025510122671127314242090084201580331641800000200115000100002300002000000490020100000000000000
.............................................................................TATCACAGCCAGCTTTGAGGAGCGACGC...........................2814000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000000000
.............................................................................TATCACAGCCAGCTTTGAGGAGCG...............................2423039283213287117867309247126115132453469835183240083673306294246191550225384666671120511637244246640480836386957755224552587046135256457853688235919279763261531485764415929252173944623609210302376629958144082244826423268791230514619179737122143053470113460155443209201981460611205157391096611850180631205418767113771142394721516912469514624969151218794977707162511072420929413704276803822844446054341577273728947312220502234517213554309290434359108170925904701653162927241833196123231942026141074194821255035332062274212713961141148617369654338142667515947294331261486681256749412042428138472512393592435043278162291633581452491081757179129131419484564339653746203931121111993011110000
..............................................................................ATCACAGCCAGCTTTGAGGAGCG...............................23210768550283615974379116189171125200129568812950526114523012315128454524150946543266271743036863222739443538596028283219343461717525291071522930332745162419144114276214124578231106481310714180448302935223812101903010190272258470010050098011060001100566147040010000113010003001012010000000200000200000000000000000000
..............................................................................ATCACAGCCAGCTTTGAGGAGCGA..............................24127428015422735120621432015144501251010010212430010211011020112300102301001201010601001103000022000200001001120000000100000000000000000100000000000000000000000000000000000000000000100000000000000000000
..............................................................................ATCACAGCCAGCTTTGAGGAG.................................21224975187212312081821951527431129171210175348212741925771852367151331213010114524537317913637874926412335268254822638204315446172925222936291232923356683412513276650602410062212162622240113340210011100101100201012003111110100010000000100000000000000000000
..............................................................................ATCACAGCCAGCTTTGAG....................................1826000100000000000000000000000000000000000000000000001001000000000000000000000000000010000010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
..............................................................................ATCACAGCCAGCTTTGAGG...................................19257000200000000000000000000000000600100000000000000003001000000000000000010250000000036380030002020030000000100100000000002000000000000000000000000000001000000001000000000000000000000000000000
..............................................................................ATCACAGCCAGCTTTGAGGA..................................20218100180103210130014702200000000013160030100000000000040021200000000003108000720012036348437640004020140000112210000000001110100000000000130100000001000000000000011000000100000000000000000000000
..............................................................................ATCACAGCCAGCTTTGAGGAGC................................222356416680301678460818824676921284335959510019501051440712221101492181381478138914169131014897211611147716553914131310108878136125112283247591511136521413582432129223115129429934441060310530301302001101002100220000000000201000200000010000000010000100200000000000000000000
...............................................................................TCACAGCCAGCTTTGAGGA..................................1925915005313512231742733211173512190041401003360000200030000000001500151500000000001300000418000130643141132270300014160500600250623534030033311041011210000300000000010010001200000001001400000000000000000010000000
...............................................................................TCACAGCCAGCTTTGAGGAGCGAC.............................2416000002100000001000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...............................................................................TCACAGCCAGCTTTGAGGAG.................................20285103931198688769691479262280473451493152193063213286123511701103609235001195962139941749225302130226723130125610060222520921441904171267319100119363837211251042847817134609302491017176122972611581146191734341051228535750201000000000023040001105200020002800000200000000000020000000
...............................................................................TCACAGCCAGCTTTGAGGAGCG...............................2229596864251833252903314451832514852434365242283263532652222534602433024013619011972182617677622283118117552222103169211411948131541485828391316231624113914342420229133718125760372917121627131955255146025418117721720179082018016091101500114134430704800200020102600002041000300010900000500000000000020200000
...............................................................................TCACAGCCAGCTTTGAGGAGC................................212508736431033981772191039327713031436811259255226210452261901014125797224503847610131068383559213528223245550353604922240237221412612474162405641281711812156114723916180793147411506105155606409111111150342185070130000100020010001102001030004300000200000000000000000000
...............................................................................TCACAGCCAGCTTTGAGG...................................182690000000010100000000020000000001300000000000000000000004000000000000000000050003030205121000002020110000010201020010011101001000300000000000000000010000000000001000100000100010000000000000000
...............................................................................TCACAGCCAGCTTTGAGGAGCGA..............................23197065231132464478281378221619202514101128241174454131411330576136771311303232025123321242340011202216013003000381415402011201202211011101000022000023002200000011000000000000000000000000000000000002400000200000000000000000000
................................................................................CACAGCCAGCTTTGAGGAGC................................202372401118310686216527714102200511125234547102983540370360114210055110010000100001610000105174322900002100060100000110010200000000000000000000000100020000001010000000000000000000000000000000000000000
................................................................................CACAGCCAGCTTTGAGGAGCGA..............................22128000202020110000010010011000000600002001000002000001000000000000000000000000000000020000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................CACAGCCAGCTTTGAGGAG.................................192575500692151713511711142225605201300220366934316952310552012104187032100219022205031100212015138124131480000021580221200230004020000000001000030010000000010000000000000100000010000000100000000000000000000
................................................................................CACAGCCAGCTTTGAGGAGCG...............................2127312064766197117168712822796591605751407403121362251021041501400282303128006070322928211241108901111303131001112121710020211401011000210000000000100100011100000100000000000002100030000000000000000000000000000000
................................................................................CACAGCCAGCTTTGAGGA..................................18241000010011002100002001000000000000001200000000000000001000000000001000000701000020241003120000010010000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000
.................................................................................ACAGCCAGCTTTGAGGAGCGA..............................21150841962229139413111412351114501193752981131006141313542141218833490692540021450588309030041410400610035131312404004020002000000000000002200000000000000000000000000000000000000001000000000000000000000000000000
.................................................................................ACAGCCAGCTTTGAGGAGC................................1921463214601198555321354335157397247248302441722893943003832536522810025522018926266272290116418916812026116617927618718017330319615221432715303279129141179070712181653313411212819152023401204866113236403135290256211015815730254717231102530440316023100431544305000110011000445602110000000000100110000000000000010010100000100000120000000000000000000
.................................................................................ACAGCCAGCTTTGAGGAGCG...............................20223269212087466792395433393308581356440395736555373774128366453276551235034533056311491691113945365940853124022133040417049427122738494371265266285242962174146952623832584723814226412442653105867811322932816539033731110478519286710953138212805431066610013000100260013000000100001000010000302011000010000000000000010080000020000000000000000000
.................................................................................ACAGCCAGCTTTGAGGAGCGAC.............................2211000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................ACAGCCAGCTTTGAGGAG.................................182263031930829305913371197110736348081346545559463965496054234624852413325118926958292330451330552924746840620979576376972595702874872815361948543810525925441631414952943161922024148310404302224891132031168110243834267612435622964723232161232101031012874016214649412121600130133200110101030701000000030000100105100000000002000020002060000040100000000000000000
..................................................................................CAGCCAGCTTTGAGGAGCG...............................192100514038861210275475115313186739614223024121132912194240205131238964432304431031452603362435213030216004301112021001302023324001013001510000100000500000000000000000000000000000000000001000000010000000000000000000000000000000
..................................................................................CAGCCAGCTTTGAGGAGC................................182324120221566229210124131014013102506031514701111385101260343134008027110019010020009000110101242050501000302030201000000000200000002000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................CAGCCAGCTTTGAGGAGCGACGC...........................2311000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................CAGCCAGCTTTGAGGAGCGA..............................20114100100210001000000000000000000002000001000001000010110000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AGCCAGCTTTGAGGAGCG...............................18277093250217274124340479114124115123097213718671923946971212452688347150314815695976877215683185184981345441824118665749223102792220222602730123565871134266121402061351315442127850662106423170084020082190300013001015320011010000006000010000001000020000000000000000000000000000000
...................................................................................AGCCAGCTTTGAGGAGCGA..............................191276803108853321112122101000290011921005327116731303420000104000500000001103001000100110011101000103000000040000000000000000000000000000000000000000000000000000000010000000000100000000000000000000
....................................................................................GCCAGCTTTGAGGAGCGA..............................18114980034602100100102001000150012503003240127706204410001200001100010001000000800000000000000000002000000121000001000000000000010010000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................ACGCGATGCTCAAGGCAAAAAA.........2217000000000000000000000000000000000000000000000000000000000000000000100000000000004000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................ACGCGATGCTCAAGGCAA.............1816000000000000000000000000000000000000000000000000000100000000000000000000020000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................ACGCGATGCTCAAGGCAAAAAAA........2311000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................ACGCGATGCTCAAGGCAAAAAAAAA......2511000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................ACGCGATGCTCAAGGCAAAA...........2014001000000000000000000001000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................ACGCGATGCTCAAGGCAAAAA..........2113000000000000001000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................GCTCAAGGCAAAAAAAAAA.....1911000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Antisense strand
                                                                                                                                    SizeBlastTotalV098 dcr-2[L811fsX] ovaryGSM424740 S2 pKF63 stably transfected V081 embryo 2-6hrSRR032095 AGO1 IP dcr2 knockdown V097 CS ovaryV065 dcr-2[L811fsX], ovary, AGO1IPV064 ago2[414], ovary, AGO1IPV063 CS,ovary,AGO1IPV076 ML-DmBG3-C2V021 ML-DmD21 cellV066 r2d2[1], ovary, AGO1IPV011 Sg4V009 CMEL1V088 r2d2[1] ovary total RNA  V082 embryo 14-24hrV026 1182-4H cellV067 S2-NPV008 S2-DRSCV089 ago2[414] ovary total RNA  V018 Kc167 cellV020 S2R+ cellSRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb SRR029031 loqs-ORF knockdown V025 S2R+ cellV028 CMEW1 Cl.8+ cellV033 CMEW1 Cl.8+ cellV090 CS  male total RNA  SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1 SRR014280 Ovary_rep1 w1118_P SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1 S33 KC-48 #2V019 GM2 cellSRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1 SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1 SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb GSM280088 S2cell (AGO1IP) V024 kc167 cellV001 IR-SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb SRR014275 Ovary_rep1 LK_P V002 IR+SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1 GSM379052 Aub Heterozygote GSM379057 Krimp Mutant SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb GSM379066 Zuc Mutant SRR032093 ago1 knockdown GSM379054 Flam Heterozygote GSM379050 Armi Heterozygote SRR031696_2152 SRR014273 Ovary_rep1_Har_P GSM379065 Zuc Heterozygote S32 s2+48 #2SRR029028 untreated (mock) V010 MLDmD20c5GSM379063 Vasa Heterozygote SRR014277 Ovary_rep1 NA_P GSM379051 Armi Mutant V083 male, one daySRR014282 Ovary_rep1 wK_P GSM379064 Vasa Mutant GSM379060 SpnE Heterozygote SRR029032 r2d2 knockdown GSM424739 S2 parental GSM379058 S31 s2+48 #1GSM379056 Krimp Heterozygote SRR029030 dcr-2 knockdown SRR029029 dcr-1 knockdown GSM379053 Aub Mutant V084 female, one daySRR029033 lacZ knockdown S35 KC+48 #2V075 ML-DmBG1-C1GSM379062 Squ Mutant SRR032094 ago2 knockdown S29 male head #1GSM379061 Squ Heterozygote SRR001345 ago2 non-beta-eliminated S30 s2-48 #2S34 KC+48 #1OSS6 Drosophila OSS cell small RNA libraries, rep2 OSS2 Drosophila OSS cell small RNA libraries, rep1 SRR029633 total small RNAs from hen1 homozygous flies SRR031699 Total small RNAs from dcr-2 homozygous flies SRR031703 Total small RNAs from r2d2 homozygous flies OSS7 Drosophila OSS cell small RNA libraries, rep3 SRR031697 Total small RNAs from dcr-2 heterozygous flies GSM379067 SpnE Mutant GSM280084 loqs-/- ovaries (18-29nt) S12 6-10h #1 (10)SRR031701 Total small RNAs from r2d2 heterozygous flies S13 6-10h #2 (11)S16 KC -48 #1GSM379055 Flam Mutant SRR031692 Total small RNAs from Oregon R OSS8 Drosophila OSS cell small RNA libraries, rep4 GSM379059 S15 S2 -48 #1GSM280082 WT ovaries (18-29nt) GSM280083 dcr-2-/- ovaries (18-29nt) S28 0-2d pupaeSRR001338 IR non-beta-eliminated GSM343287 Drosophila Toll 10b mutant embryos S22 female head #1S24 male body #2SRR001349 heterozygous dcr-2_untreated S8 S2-48,+48, KC-48, +48 mixSRR001347 ago2 untreated GSM280085 WT testes (18-24nt) SRR032096 AGO2 IP dcr2 knockdownSRR001664 homozygous dcr-2_untreated S10 2-6h #1 (8)GSM424741 S2 pKF63 transiently transfected S27 0-1d Pupae (w)SRR001341 WT_males non-beta-eliminated SRR001339 WT_females non-beta-eliminated SRR001344 dcr-2 beta-eliminated SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies S9 0-1h #3 (7)SRR001343 dcr-2 non-beta-eliminated GSM239052 S2 cells, non beta-eliminated S19 2-4day pupae #1S2 female headS21 disk #2S23 female body #2S14 0-1hr #1 (A)S5 imaginal discSRR010954 Aub trans-heterozygotes, oxidized S7 12-24hr embryoSRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies S1 male headS11 2-6h #2 (9)SRR032092 mock oxidized SRR010953 Aub heterozygotes, oxidized SRR010959 Ago3 IP in heterozygotes SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies SRR031693_4 GSM280087 S2cell (AGO2IP) SRR010956 Piwi IP in Ago3 heterozygotes S18 3rd inster #2GSM180328 adult heads (female heads, male heads) GSM180332 mid embryo (6-10) S17 3rd inster #1SRR010955 Aub IP in Ago3 heterozygotes GSM239041 fly heads, non beta-eliminated SRR001348 ago2 oxidized S4 female bodyS20 2-4day pupae#2GSM180337 tissue culture cells (S2 only) S26 1st instar #2S3 male bodyGSM180333 late embryo (12-24) SRR001337 WT_females beta-eliminated GSM180331 early embryo (2-6) S25 1st instar #1SRR001346 ago2 beta-eliminated GSM180335 imaginal discs SRR010958 Piwi IP in Ago3 trans-heterozygotes GSM467730 r2d2 GSM467729 WT SRR023400 total RNA extracted from P19 cells GSM180330 very early embryo (0-1) GSM180334 larvae: 1st instar and 3rd instars GSM180329 adult bodies (female bodies, male bodies) GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day GSM467731 loq SRR023399 RNA bound by P19 protein SRR010960 wt, oxidized SRR001340 IR beta-eliminated GSM239051 S2 cells, beta-eliminated SRR023197 RNA Library from S2 control cells SRR001342 WT_males beta-eliminated SRR010952 Ago3 trans-heterozygotes, oxidized GSM239050 fly heads, beta-eliminated SRR010957 Aub IP in Ago3 trans-heterozygotes SRR023407 RNA bound by NLS-P19 protein GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006) SRR010951 Ago3 heterozygotes, oxidized GSM246084 D. melanogaster adult male heads 454 GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries SRR023402 total RNA extracted from NLS-P19 cells GSM280086 WT ovaries (AGO2IP) GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0
..........TCGAAACAGGAGAATTGTGT......................................................................................................2011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...............ACAGGAGAATTGTGTCATTC.................................................................................................2011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000