Page generated on Fri Oct 15 12:01:39 2010

dme-mir-932



dme-mir-932

View dme-mir-932 on miRBase

miRNA	Length	Perfect(sense)	Perfect(antisense)	5' moR	5'arm	Loop	3'arm	3' moR	Other	Loop Size	Mature	Star
dme-mir-932	140	86657	1	3	82942		3712	1		16	82942	3712

GTTTCTATATATTTCAAAAAGAGTATTGGTTTTGAAGTTTTCAATTCCGTAGTGCATTGCAGTGTGTTTCATTATTTACTGCAAGCGCTGCGGATTTGGCAACTTTGACGACCTTCATCATCTGCTAGAGAAATGTGAAA
...........................(((((..(((((.((((.((((((((((.((((((((.((......)).)))))))))))))))))).)))).)))))..).))))...........................-43.60
.((((.((((.((((....(((.....(((((..(((((.((((.((((((((((.((((((((.((......)).)))))))))))))))))).)))).)))))..).)))).......)))....)))).))))))))-50.70
Sense strand

	Size	Blast	Total	S29 male head #1	SRR029633 total small RNAs from hen1 homozygous flies	SRR031696_2152	SRR031703 Total small RNAs from r2d2 homozygous flies	SRR031692 Total small RNAs from Oregon R	SRR031701 Total small RNAs from r2d2 heterozygous flies	S22 female head #1	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR031699 Total small RNAs from dcr-2 homozygous flies	SRR001349 heterozygous dcr-2_untreated	SRR001338 IR non-beta-eliminated	SRR001347 ago2 untreated	S2 female head	V090 CS  male total RNA	SRR001664 homozygous dcr-2_untreated	V082 embryo 14-24hr	S1 male head	V001 IR-	V083 male, one day	V002 IR+	SRR001345 ago2 non-beta-eliminated	SRR001343 dcr-2 non-beta-eliminated	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	GSM180328 adult heads (female heads, male heads)	V084 female, one day	S33 KC-48 #2	S28 0-2d pupae	S24 male body #2	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	S27 0-1d Pupae (w)	SRR001348 ago2 oxidized	S21 disk #2	S5 imaginal disc	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	SRR001344 dcr-2 beta-eliminated	V075 ML-DmBG1-C1	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	V076 ML-DmBG3-C2	S9 0-1h #3 (7)	SRR031693_4	S19 2-4day pupae #1	S32 s2+48 #2	GSM239041 fly heads, non beta-eliminated	GSM239052 S2 cells, non beta-eliminated	S23 female body #2	S16 KC -48 #1	S7 12-24hr embryo	V019 GM2 cell	S20 2-4day pupae#2	S18 3rd inster #2	S35 KC+48 #2	V098 dcr-2[L811fsX] ovary	GSM379057 Krimp Mutant	S34 KC+48 #1	V097 CS ovary	V008 S2-DRSC	GSM246084 D. melanogaster adult male heads 454	S25 1st instar #1	S3 male body	GSM280085 WT testes (18-24nt)	SRR014275 Ovary_rep1 LK_P	V065 dcr-2[L811fsX], ovary, AGO1IP	S26 1st instar #2	GSM180333 late embryo (12-24)	GSM467729 WT	V064 ago2[414], ovary, AGO1IP	OSS2 Drosophila OSS cell small RNA libraries, rep1	OSS6 Drosophila OSS cell small RNA libraries, rep2	S4 female body	S10 2-6h #1 (8)	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	V033 CMEW1 Cl.8+ cell	SRR001337 WT_females beta-eliminated	V089 ago2[414] ovary total RNA	OSS7 Drosophila OSS cell small RNA libraries, rep3	V011 Sg4	V081 embryo 2-6hr	V063 CS,ovary,AGO1IP	SRR014273 Ovary_rep1_Har_P	S8 S2-48,+48, KC-48, +48 mix	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	GSM379065 Zuc Heterozygote	GSM379051 Armi Mutant	V088 r2d2[1] ovary total RNA	V026 1182-4H cell	GSM280087 S2cell (AGO2IP)	OSS8 Drosophila OSS cell small RNA libraries, rep4	GSM180335 imaginal discs	GSM239050 fly heads, beta-eliminated	GSM379063 Vasa Heterozygote	SRR001340 IR beta-eliminated	GSM467730 r2d2	V009 CMEL1	SRR014280 Ovary_rep1 w1118_P	GSM379066 Zuc Mutant	GSM379064 Vasa Mutant	S17 3rd inster #1	GSM239051 S2 cells, beta-eliminated	GSM280084 loqs-/- ovaries (18-29nt)	GSM379060 SpnE Heterozygote	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	GSM379053 Aub Mutant	SRR001346 ago2 beta-eliminated	SRR029031 loqs-ORF knockdown	SRR014277 Ovary_rep1 NA_P	GSM379062 Squ Mutant	GSM379061 Squ Heterozygote	S13 6-10h #2 (11)	V066 r2d2[1], ovary, AGO1IP	GSM467731 loq	V021 ML-DmD21 cell	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	GSM343287 Drosophila Toll 10b mutant embryos	GSM379056 Krimp Heterozygote	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	SRR029033 lacZ knockdown	GSM424740 S2 pKF63 stably transfected	GSM180329 adult bodies (female bodies, male bodies)	GSM379067 SpnE Mutant	GSM379050 Armi Heterozygote	V010 MLDmD20c5	V028 CMEW1 Cl.8+ cell	GSM379054 Flam Heterozygote	GSM280088 S2cell (AGO1IP)	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	SRR029028 untreated (mock)	V018 Kc167 cell	SRR014282 Ovary_rep1 wK_P	SRR032094 ago2 knockdown	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	GSM379052 Aub Heterozygote	S15 S2 -48 #1	S30 s2-48 #2	GSM280083 dcr-2-/- ovaries (18-29nt)	V024 kc167 cell	GSM379058	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	S31 s2+48 #1	V020 S2R+ cell	SRR001342 WT_males beta-eliminated	SRR032093 ago1 knockdown	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	GSM180334 larvae: 1st instar and 3rd instars	SRR010959 Ago3 IP in heterozygotes	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023407 RNA bound by NLS-P19 protein	GSM280082 WT ovaries (18-29nt)	GSM379059	S12 6-10h #1 (10)	GSM180332 mid embryo (6-10)	SRR010952 Ago3 trans-heterozygotes, oxidized	SRR010954 Aub trans-heterozygotes, oxidized	GSM379055 Flam Mutant	SRR032095 AGO1 IP dcr2 knockdown	GSM180331 early embryo (2-6)	V025 S2R+ cell	V067 S2-NP	SRR023399 RNA bound by P19 protein	GSM280086 WT ovaries (AGO2IP)	S11 2-6h #2 (9)	S14 0-1hr #1 (A)	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	SRR023197 RNA Library from S2 control cells	SRR032092 mock oxidized	SRR010956 Piwi IP in Ago3 heterozygotes	SRR023400 total RNA extracted from P19 cells	GSM180337 tissue culture cells (S2 only)	SRR010960 wt, oxidized	SRR023402 total RNA extracted from NLS-P19 cells	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	SRR029029 dcr-1 knockdown	SRR029032 r2d2 knockdown	GSM180330 very early embryo (0-1)	GSM424741 S2 pKF63 transiently transfected	SRR032096 AGO2 IP dcr2 knockdown	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	SRR010958 Piwi IP in Ago3 trans-heterozygotes	SRR010955 Aub IP in Ago3 heterozygotes	SRR029030 dcr-2 knockdown	GSM424739 S2 parental	SRR010951 Ago3 heterozygotes, oxidized	SRR010953 Aub heterozygotes, oxidized
............TTCAAAAAGAGTATTGGT..............................................................................................................	18	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................GAGTATTGGTTTTGAAGTTT....................................................................................................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................AGTATTGGTTTTGAAGTTT....................................................................................................	19	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................TTCAATTCCGTAGTGCATTGCAG..............................................................................	23	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................TCAATTCCGTAGTGCATT..................................................................................	18	1	301	127	14	10	0	0	3	28	9	4	4	6	1	6	0	2	0	17	0	0	0	0	0	13	0	2	3	1	0	0	0	3	0	13	0	0	7	0	0	19	0	0	5	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................TCAATTCCGTAGTGCATTGCA...............................................................................	21	1	8736	1822	673	503	491	375	480	815	700	693	266	178	257	203	24	205	1	139	2	6	2	191	87	34	72	2	33	11	22	20	20	2	3	16	10	5	39	59	8	22	5	16	16	5	24	16	9	9	6	1	7	3	2	2	0	10	8	0	10	4	1	4	0	3	1	1	0	3	3	2	1	5	5	1	2	8	0	2	2	0	1	1	2	1	1	2	2	1	0	1	4	1	1	3	1	0	2	1	2	0	0	2	0	0	1	3	0	0	1	0	3	2	0	0	0	0	0	0	0	0	1	1	1	1	0	0	0	1	1	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................TCAATTCCGTAGTGCATTG.................................................................................	19	1	999	238	101	39	81	27	123	82	42	20	34	44	26	24	16	26	0	23	0	0	0	0	2	7	0	0	0	1	4	2	2	1	0	3	2	0	1	0	0	3	0	0	0	0	3	2	2	0	6	0	0	0	0	0	0	1	2	0	0	0	0	1	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................TCAATTCCGTAGTGCATTGCAG..............................................................................	22	1	28061	9641	1930	1640	1577	1355	1342	1596	992	779	857	614	711	909	214	507	21	547	24	112	43	123	240	138	242	51	120	82	156	57	57	61	52	89	54	56	48	28	19	18	23	51	10	42	40	42	52	60	41	22	28	25	25	29	11	25	25	6	6	14	12	24	35	8	14	18	2	12	10	12	9	15	14	2	3	2	3	8	4	1	2	6	9	3	11	7	5	5	7	5	4	8	6	4	3	3	3	3	3	7	1	3	3	2	1	3	0	1	3	1	0	1	3	1	5	3	0	0	0	0	1	1	1	0	0	1	0	2	2	1	1	0	0	1	2	2	3	2	1	3	0	2	0	1	2	0	1	3	1	1	1	1	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................TCAATTCCGTAGTGCATTGC................................................................................	20	1	4975	1189	520	301	437	159	493	229	227	195	167	218	156	88	62	134	0	104	1	3	2	0	13	45	38	2	17	5	7	3	3	8	1	12	1	4	5	3	2	12	3	4	2	0	3	6	2	10	6	0	2	1	1	5	0	3	6	0	4	1	0	1	5	0	2	1	0	5	1	0	1	2	0	1	0	0	0	2	0	0	0	3	0	2	1	0	4	0	0	2	0	0	0	2	1	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	5	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................TCAATTCCGTAGTGCATTGCAGTG............................................................................	24	1	33	3	4	5	1	3	2	0	1	3	0	0	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................TCAATTCCGTAGTGCATTGCAGT.............................................................................	23	1	38941	6587	4398	3161	2240	2478	1594	1277	1441	1230	1271	1302	900	605	1256	671	952	254	902	703	743	345	346	192	181	299	148	208	126	207	207	65	208	83	140	134	52	74	116	30	102	65	17	80	60	41	43	39	55	92	55	71	60	46	49	30	26	29	35	34	33	16	3	26	20	17	28	6	16	15	15	7	10	21	19	12	16	10	20	22	16	13	12	18	10	13	8	13	13	11	12	7	10	6	6	11	12	12	11	5	0	8	12	9	10	8	9	8	6	9	7	5	4	9	5	0	8	8	9	0	6	6	6	6	5	2	6	2	3	3	3	5	4	4	3	2	2	2	3	1	4	1	4	3	1	3	2	0	1	1	0	1	1	1	1	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................TCAATTCCGTAGTGCATTGCAGTGTGT.........................................................................	27	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................TCAATTCCGTAGTGCATTGCAGTGT...........................................................................	25	1	3	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................CAATTCCGTAGTGCATTG.................................................................................	18	1	3	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................CAATTCCGTAGTGCATTGCAGT.............................................................................	22	1	206	12	36	33	17	26	4	1	19	17	2	7	5	0	1	0	5	0	1	0	2	2	2	0	1	0	0	0	0	4	4	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................CAATTCCGTAGTGCATTGC................................................................................	19	1	21	0	3	3	2	0	3	1	5	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................CAATTCCGTAGTGCATTGCA...............................................................................	20	1	42	1	2	3	0	3	1	2	10	8	0	0	1	0	0	2	0	1	0	0	0	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................CAATTCCGTAGTGCATTGCAGTG............................................................................	23	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................CAATTCCGTAGTGCATTGCAG..............................................................................	21	1	176	49	27	16	13	16	7	2	12	14	0	2	2	0	0	3	0	0	0	1	0	0	3	0	0	0	0	2	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................AATTCCGTAGTGCATTGCAG..............................................................................	20	1	89	13	8	6	12	7	5	0	6	4	1	8	0	1	3	1	0	0	0	4	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................AATTCCGTAGTGCATTGCAGT.............................................................................	21	1	231	13	33	20	10	16	5	2	8	5	0	6	1	0	18	0	24	0	15	15	10	3	2	0	0	7	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................AATTCCGTAGTGCATTGCA...............................................................................	19	1	41	2	12	3	8	0	4	0	2	5	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................AATTCCGTAGTGCATTGC................................................................................	18	1	13	0	2	2	0	0	2	1	0	1	0	1	0	0	2	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................AATTCCGTAGTGCATTGCAGTG............................................................................	22	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................ATTCCGTAGTGCATTGCAG..............................................................................	19	1	12	0	3	2	1	0	0	0	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................ATTCCGTAGTGCATTGCAGT.............................................................................	20	1	27	0	5	0	0	1	0	1	4	4	3	6	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................ATTCCGTAGTGCATTGCA...............................................................................	18	1	4	0	2	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................TTCCGTAGTGCATTGCAG..............................................................................	18	1	5	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................TTCCGTAGTGCATTGCAGT.............................................................................	19	1	11	0	1	2	0	1	0	0	0	2	0	1	0	0	0	0	1	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................TCCGTAGTGCATTGCAGT.............................................................................	18	1	8	0	2	1	0	0	0	1	1	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................CTGCAAGCGCTGCGGATTTGGCA.......................................	23	1	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................CTGCAAGCGCTGCGGATTTGG.........................................	21	1	5	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................CTGCAAGCGCTGCGGATTTGGC........................................	22	1	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................TGCAAGCGCTGCGGATTTGG.........................................	20	1	445	23	25	43	11	16	13	6	4	15	3	17	5	4	7	2	2	1	1	8	0	4	3	94	1	6	0	0	0	1	1	55	0	1	0	1	9	3	4	9	1	0	15	0	0	3	2	0	0	0	2	0	0	0	3	1	0	3	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................TGCAAGCGCTGCGGATTTGGCAA......................................	23	1	29	0	1	2	3	2	5	1	2	1	1	0	0	1	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................TGCAAGCGCTGCGGATTTG..........................................	19	1	37	0	11	1	1	1	3	1	2	1	1	0	2	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	3	0	0	0	0	1	0	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................TGCAAGCGCTGCGGATTTGGC........................................	21	1	658	25	13	74	14	17	16	12	9	18	5	19	8	1	47	3	16	0	8	7	6	21	6	95	2	5	3	0	0	5	5	57	0	2	0	3	19	7	2	16	1	0	31	0	0	8	5	0	0	0	4	0	1	0	2	1	0	5	0	0	0	0	0	1	2	0	0	0	1	2	1	0	0	0	1	4	0	2	0	0	1	1	0	0	0	1	0	0	0	1	0	2	0	0	0	0	0	0	0	0	9	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................TGCAAGCGCTGCGGATTTGGCA.......................................	22	1	2484	102	144	435	158	98	132	22	79	123	39	90	44	13	163	34	144	4	62	43	66	84	17	57	2	24	2	11	0	12	12	44	7	4	6	4	12	16	14	13	7	0	33	2	0	7	5	1	4	2	5	3	3	0	7	0	0	14	1	0	0	0	0	0	1	0	6	4	1	1	2	0	0	1	2	1	7	2	1	3	2	0	1	0	0	0	2	0	0	0	0	0	1	2	0	3	0	1	0	2	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................TGCAAGCGCTGCGGATTT...........................................	18	1	9	0	0	2	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................GCAAGCGCTGCGGATTTGGCA.......................................	21	1	21	1	1	3	2	1	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................GCAAGCGCTGCGGATTTGGC........................................	20	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................GCAAGCGCTGCGGATTTGG.........................................	19	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................GCAAGCGCTGCGGATTTG..........................................	18	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................GCAAGCGCTGCGGATTTGGCAA......................................	22	1	2	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................CAAGCGCTGCGGATTTGGC........................................	19	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................CAAGCGCTGCGGATTTGGCA.......................................	20	1	2	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................AAGCGCTGCGGATTTGGCA.......................................	19	1	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................AGCGCTGCGGATTTGGCA.......................................	18	1	8	0	1	0	2	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Antisense strand

	Size	Blast	Total	S29 male head #1	SRR029633 total small RNAs from hen1 homozygous flies	SRR031696_2152	SRR031703 Total small RNAs from r2d2 homozygous flies	SRR031692 Total small RNAs from Oregon R	SRR031701 Total small RNAs from r2d2 heterozygous flies	S22 female head #1	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR031699 Total small RNAs from dcr-2 homozygous flies	SRR001349 heterozygous dcr-2_untreated	SRR001338 IR non-beta-eliminated	SRR001347 ago2 untreated	S2 female head	V090 CS  male total RNA	SRR001664 homozygous dcr-2_untreated	V082 embryo 14-24hr	S1 male head	V001 IR-	V083 male, one day	V002 IR+	SRR001345 ago2 non-beta-eliminated	SRR001343 dcr-2 non-beta-eliminated	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	GSM180328 adult heads (female heads, male heads)	V084 female, one day	S33 KC-48 #2	S28 0-2d pupae	S24 male body #2	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	S27 0-1d Pupae (w)	SRR001348 ago2 oxidized	S21 disk #2	S5 imaginal disc	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	SRR001344 dcr-2 beta-eliminated	V075 ML-DmBG1-C1	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	V076 ML-DmBG3-C2	S9 0-1h #3 (7)	SRR031693_4	S19 2-4day pupae #1	S32 s2+48 #2	GSM239041 fly heads, non beta-eliminated	GSM239052 S2 cells, non beta-eliminated	S23 female body #2	S16 KC -48 #1	S7 12-24hr embryo	V019 GM2 cell	S20 2-4day pupae#2	S18 3rd inster #2	S35 KC+48 #2	V098 dcr-2[L811fsX] ovary	GSM379057 Krimp Mutant	S34 KC+48 #1	V097 CS ovary	V008 S2-DRSC	GSM246084 D. melanogaster adult male heads 454	S25 1st instar #1	S3 male body	GSM280085 WT testes (18-24nt)	SRR014275 Ovary_rep1 LK_P	V065 dcr-2[L811fsX], ovary, AGO1IP	S26 1st instar #2	GSM180333 late embryo (12-24)	GSM467729 WT	V064 ago2[414], ovary, AGO1IP	OSS2 Drosophila OSS cell small RNA libraries, rep1	OSS6 Drosophila OSS cell small RNA libraries, rep2	S4 female body	S10 2-6h #1 (8)	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	V033 CMEW1 Cl.8+ cell	SRR001337 WT_females beta-eliminated	V089 ago2[414] ovary total RNA	OSS7 Drosophila OSS cell small RNA libraries, rep3	V011 Sg4	V081 embryo 2-6hr	V063 CS,ovary,AGO1IP	SRR014273 Ovary_rep1_Har_P	S8 S2-48,+48, KC-48, +48 mix	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	GSM379065 Zuc Heterozygote	GSM379051 Armi Mutant	V088 r2d2[1] ovary total RNA	V026 1182-4H cell	GSM280087 S2cell (AGO2IP)	OSS8 Drosophila OSS cell small RNA libraries, rep4	GSM180335 imaginal discs	GSM239050 fly heads, beta-eliminated	GSM379063 Vasa Heterozygote	SRR001340 IR beta-eliminated	GSM467730 r2d2	V009 CMEL1	SRR014280 Ovary_rep1 w1118_P	GSM379066 Zuc Mutant	GSM379064 Vasa Mutant	S17 3rd inster #1	GSM239051 S2 cells, beta-eliminated	GSM280084 loqs-/- ovaries (18-29nt)	GSM379060 SpnE Heterozygote	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	GSM379053 Aub Mutant	SRR001346 ago2 beta-eliminated	SRR029031 loqs-ORF knockdown	SRR014277 Ovary_rep1 NA_P	GSM379062 Squ Mutant	GSM379061 Squ Heterozygote	S13 6-10h #2 (11)	V066 r2d2[1], ovary, AGO1IP	GSM467731 loq	V021 ML-DmD21 cell	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	GSM343287 Drosophila Toll 10b mutant embryos	GSM379056 Krimp Heterozygote	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	SRR029033 lacZ knockdown	GSM424740 S2 pKF63 stably transfected	GSM180329 adult bodies (female bodies, male bodies)	GSM379067 SpnE Mutant	GSM379050 Armi Heterozygote	V010 MLDmD20c5	V028 CMEW1 Cl.8+ cell	GSM379054 Flam Heterozygote	GSM280088 S2cell (AGO1IP)	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	SRR029028 untreated (mock)	V018 Kc167 cell	SRR014282 Ovary_rep1 wK_P	SRR032094 ago2 knockdown	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	GSM379052 Aub Heterozygote	S15 S2 -48 #1	S30 s2-48 #2	GSM280083 dcr-2-/- ovaries (18-29nt)	V024 kc167 cell	GSM379058	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	S31 s2+48 #1	V020 S2R+ cell	SRR001342 WT_males beta-eliminated	SRR032093 ago1 knockdown	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	GSM180334 larvae: 1st instar and 3rd instars	SRR010959 Ago3 IP in heterozygotes	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023407 RNA bound by NLS-P19 protein	GSM280082 WT ovaries (18-29nt)	GSM379059	S12 6-10h #1 (10)	GSM180332 mid embryo (6-10)	SRR010952 Ago3 trans-heterozygotes, oxidized	SRR010954 Aub trans-heterozygotes, oxidized	GSM379055 Flam Mutant	SRR032095 AGO1 IP dcr2 knockdown	GSM180331 early embryo (2-6)	V025 S2R+ cell	V067 S2-NP	SRR023399 RNA bound by P19 protein	GSM280086 WT ovaries (AGO2IP)	S11 2-6h #2 (9)	S14 0-1hr #1 (A)	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	SRR023197 RNA Library from S2 control cells	SRR032092 mock oxidized	SRR010956 Piwi IP in Ago3 heterozygotes	SRR023400 total RNA extracted from P19 cells	GSM180337 tissue culture cells (S2 only)	SRR010960 wt, oxidized	SRR023402 total RNA extracted from NLS-P19 cells	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	SRR029029 dcr-1 knockdown	SRR029032 r2d2 knockdown	GSM180330 very early embryo (0-1)	GSM424741 S2 pKF63 transiently transfected	SRR032096 AGO2 IP dcr2 knockdown	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	SRR010958 Piwi IP in Ago3 trans-heterozygotes	SRR010955 Aub IP in Ago3 heterozygotes	SRR029030 dcr-2 knockdown	GSM424739 S2 parental	SRR010951 Ago3 heterozygotes, oxidized	SRR010953 Aub heterozygotes, oxidized
......................................................................................................CTTTGACGACCTTCATCATC..................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0