Page generated on Fri Oct 15 12:01:38 2010

dme-mir-957




dme-mir-957

View dme-mir-957 on miRBase
miRNALengthPerfect(sense)Perfect(antisense)5' moR5'armLoop3'arm3' moROtherLoop SizeMatureStar
dme-mir-95714599097323121298769322398769312


AAGAATATATTATATCCGTAGTGTTGTCCACAATAGACCTTAGTTTTCGACGTGTTTTGGTGTGCTGGGGAGTTCTATTCCGATTGAAACCGTCCAAAACTGAGGCCAACTGTGAGGCGCGAGCATCTATCCAAAAAGCGATACC
.........................(((((((...(.((((((((((.((((.((((..((......((((......)))).))..)))))))).)))))))))).)...)))).)))...........................-33.30
....................(((((((.((((...(.((((((((((.((((.((((..((......((((......)))).))..)))))))).)))))))))).)...))))..((....)).............))))))).-39.70
Sense strand
                                                                                                                                                 SizeBlastTotalSRR031696_2152 SRR001345 ago2 non-beta-eliminated V090 CS  male total RNA  SRR031703 Total small RNAs from r2d2 homozygous flies SRR029633 total small RNAs from hen1 homozygous flies SRR031699 Total small RNAs from dcr-2 homozygous flies SRR031701 Total small RNAs from r2d2 heterozygous flies SRR031697 Total small RNAs from dcr-2 heterozygous flies SRR031692 Total small RNAs from Oregon R V083 male, one dayS29 male head #1SRR001343 dcr-2 non-beta-eliminated SRR001338 IR non-beta-eliminated SRR001344 dcr-2 beta-eliminated SRR001664 homozygous dcr-2_untreated SRR001341 WT_males non-beta-eliminated SRR001339 WT_females non-beta-eliminated V084 female, one daySRR001347 ago2 untreated SRR001349 heterozygous dcr-2_untreated S22 female head #1SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies V082 embryo 14-24hrS2 female headS24 male body #2GSM239041 fly heads, non beta-eliminated SRR001348 ago2 oxidized SRR001337 WT_females beta-eliminated V008 S2-DRSCS1 male headSRR001346 ago2 beta-eliminated SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies V002 IR+GSM180328 adult heads (female heads, male heads) SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies V001 IR-SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies S27 0-1d Pupae (w)GSM239052 S2 cells, non beta-eliminated S23 female body #2S9 0-1h #3 (7)GSM280087 S2cell (AGO2IP) S28 0-2d pupaeSRR031693_4 V076 ML-DmBG3-C2S21 disk #2SRR032092 mock oxidized SRR001340 IR beta-eliminated V098 dcr-2[L811fsX] ovaryS19 2-4day pupae #1S5 imaginal discS4 female bodySRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb V011 Sg4SRR032094 ago2 knockdown S3 male bodyGSM379050 Armi Heterozygote S18 3rd inster #2S20 2-4day pupae#2S10 2-6h #1 (8)SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1 S32 s2+48 #2SRR001342 WT_males beta-eliminated GSM467729 WT V081 embryo 2-6hrGSM379057 Krimp Mutant S35 KC+48 #2GSM246084 D. melanogaster adult male heads 454 GSM379060 SpnE Heterozygote S34 KC+48 #1GSM239050 fly heads, beta-eliminated GSM467730 r2d2 V009 CMEL1GSM280084 loqs-/- ovaries (18-29nt) V089 ago2[414] ovary total RNA  GSM280088 S2cell (AGO1IP) S17 3rd inster #1GSM379067 SpnE Mutant S26 1st instar #2GSM180335 imaginal discs GSM180329 adult bodies (female bodies, male bodies) V097 CS ovarySRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1 GSM343287 Drosophila Toll 10b mutant embryos SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1 GSM239051 S2 cells, beta-eliminated V088 r2d2[1] ovary total RNA  V010 MLDmD20c5GSM467731 loq SRR029032 r2d2 knockdown V033 CMEW1 Cl.8+ cellGSM379065 Zuc Heterozygote S13 6-10h #2 (11)GSM180334 larvae: 1st instar and 3rd instars S8 S2-48,+48, KC-48, +48 mixV075 ML-DmBG1-C1SRR029030 dcr-2 knockdown GSM180333 late embryo (12-24) V063 CS,ovary,AGO1IPS7 12-24hr embryoSRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb GSM379056 Krimp Heterozygote GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day SRR023197 RNA Library from S2 control cells SRR023402 total RNA extracted from NLS-P19 cells GSM379054 Flam Heterozygote V065 dcr-2[L811fsX], ovary, AGO1IPSRR014273 Ovary_rep1_Har_P GSM379064 Vasa Mutant GSM379055 Flam Mutant S25 1st instar #1GSM379051 Armi Mutant SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb GSM379061 Squ Heterozygote OSS6 Drosophila OSS cell small RNA libraries, rep2 GSM379059 V024 kc167 cellGSM379058 GSM280086 WT ovaries (AGO2IP) SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1 S11 2-6h #2 (9)V018 Kc167 cellSRR014282 Ovary_rep1 wK_P SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1 GSM180332 mid embryo (6-10) S14 0-1hr #1 (A)S16 KC -48 #1OSS8 Drosophila OSS cell small RNA libraries, rep4 V019 GM2 cellGSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries SRR029031 loqs-ORF knockdown S31 s2+48 #1SRR010957 Aub IP in Ago3 trans-heterozygotes SRR010952 Ago3 trans-heterozygotes, oxidized SRR029033 lacZ knockdown SRR010956 Piwi IP in Ago3 heterozygotes GSM424740 S2 pKF63 stably transfected SRR010954 Aub trans-heterozygotes, oxidized SRR023400 total RNA extracted from P19 cells GSM379063 Vasa Heterozygote V020 S2R+ cellSRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb SRR023407 RNA bound by NLS-P19 protein GSM180337 tissue culture cells (S2 only) SRR010960 wt, oxidized V066 r2d2[1], ovary, AGO1IPGSM379052 Aub Heterozygote SRR014275 Ovary_rep1 LK_P OSS2 Drosophila OSS cell small RNA libraries, rep1 GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries S33 KC-48 #2GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006) GSM379053 Aub Mutant SRR032095 AGO1 IP dcr2 knockdown SRR029029 dcr-1 knockdown V028 CMEW1 Cl.8+ cellSRR010959 Ago3 IP in heterozygotes SRR014280 Ovary_rep1 w1118_P V026 1182-4H cellGSM180331 early embryo (2-6) SRR014277 Ovary_rep1 NA_P OSS7 Drosophila OSS cell small RNA libraries, rep3 GSM180330 very early embryo (0-1) GSM424741 S2 pKF63 transiently transfected SRR032096 AGO2 IP dcr2 knockdownV021 ML-DmD21 cellS15 S2 -48 #1GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0 S30 s2-48 #2GSM379062 Squ Mutant V025 S2R+ cellSRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb SRR010958 Piwi IP in Ago3 trans-heterozygotes V067 S2-NPGSM280082 WT ovaries (18-29nt) SRR023399 RNA bound by P19 protein SRR010955 Aub IP in Ago3 heterozygotes GSM424739 S2 parental GSM280083 dcr-2-/- ovaries (18-29nt) SRR029028 untreated (mock) SRR032093 ago1 knockdown GSM280085 WT testes (18-24nt) S12 6-10h #1 (10)SRR010951 Ago3 heterozygotes, oxidized GSM379066 Zuc Mutant SRR010953 Aub heterozygotes, oxidized V064 ago2[414], ovary, AGO1IP
.................GTAGTGTTGTCCACAATAGAC...........................................................................................................2111000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGTGTTGTCCACAATAGAC...........................................................................................................1911000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CTTAGTTTTCGACGTGTTTTGG.....................................................................................221472010103113003000010101600010000020020620000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CTTAGTTTTCGACGTGTTTTG......................................................................................21111111040011000000000010000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CTTAGTTTTCGACGTGTTTTGGTGT..................................................................................2511000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CTTAGTTTTCGACGTGTTTT.......................................................................................2012000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CTTAGTTTTCGACGTGTTTTGGT....................................................................................2312483812221969121421940012211204183310001000300021500000070000020000000100000000000010000000000000020000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CTTAGTTTTCGACGTGTTTTGGTG...................................................................................2411000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TTAGTTTTCGACGTGTTTTGGT....................................................................................2211000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GTTTTCGACGTGTTTTGGT....................................................................................1911000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................CGTGTTTTGGTGTGCTGGGGA..........................................................................2111000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GTGCTGGGGAGTTCTATTCCG...............................................................2113000000000000000000000100000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GTGCTGGGGAGTTCTATTCCGAT.............................................................2318000020020000020000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................GCTGGGGAGTTCTATTCCGAT.............................................................2111000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................TTGAAACCGTCCAAAACTGAGG........................................2212000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................TTGAAACCGTCCAAAACTGAGGC.......................................2312000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TGAAACCGTCCAAAACTGAGGCCA.....................................2413000010000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TGAAACCGTCCAAAACTGAGGC.......................................2214882675486263396631822565237418751995189623442274160113221420795762762105078874029446834921117519012012182114110641246439983573463435224818123214141522251316134816141281113278659255533254551140401203220011011100001110101111111000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TGAAACCGTCCAAAACTGAGG........................................211425005559286239273435318626002713219618031581115713431447769102591991974482480676438623160134103123941359468587575592852840323561430522181454115514901353125042431630122411003301012110101210200010010001000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TGAAACCGTCCAAAACTGAG.........................................2013641556102210338377226309168156501511421534110510610619638237201204881079330260314421210001200101010002004300020101001000001002000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TGAAACCGTCCAAAACTGA..........................................19135240310405416482691531521844161541200001000010060101000010000000000000000000400000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TGAAACCGTCCAAAACTGAGGCC......................................23110817864751473112402111334200230001101000000000000000000000000000000101000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................TGAAACCGTCCAAAACTG...........................................18158212173623000301110320400109000030020000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GAAACCGTCCAAAACTGAG.........................................19119328504627121676017726440360200002001000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GAAACCGTCCAAAACTGAGGC.......................................211161632222652571444898548629575156433030237300910009300310000100000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GAAACCGTCCAAAACTGAGGCC......................................2213000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GAAACCGTCCAAAACTGAGG........................................201131520477319416061128678326484728343232037460900005500220010000000010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................GAAACCGTCCAAAACTGA..........................................1817100000300000200000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AAACCGTCCAAAACTGAG.........................................1817400000110000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AAACCGTCCAAAACTGAGG........................................19145730658271101200000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AAACCGTCCAAAACTGAGGC.......................................2016711811093464102210220000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................AACCGTCCAAAACTGAGGC.......................................1918400020002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................AACCGTCCAAAACTGAGG........................................1817100011012000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................ACCGTCCAAAACTGAGGC.......................................1819400002012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................CAACTGTGAGGCGCGAGCATC..................2111000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
Antisense strand
                                                                                                                                                 SizeBlastTotalSRR031696_2152 SRR001345 ago2 non-beta-eliminated V090 CS  male total RNA  SRR031703 Total small RNAs from r2d2 homozygous flies SRR029633 total small RNAs from hen1 homozygous flies SRR031699 Total small RNAs from dcr-2 homozygous flies SRR031701 Total small RNAs from r2d2 heterozygous flies SRR031697 Total small RNAs from dcr-2 heterozygous flies SRR031692 Total small RNAs from Oregon R V083 male, one dayS29 male head #1SRR001343 dcr-2 non-beta-eliminated SRR001338 IR non-beta-eliminated SRR001344 dcr-2 beta-eliminated SRR001664 homozygous dcr-2_untreated SRR001341 WT_males non-beta-eliminated SRR001339 WT_females non-beta-eliminated V084 female, one daySRR001347 ago2 untreated SRR001349 heterozygous dcr-2_untreated S22 female head #1SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies V082 embryo 14-24hrS2 female headS24 male body #2GSM239041 fly heads, non beta-eliminated SRR001348 ago2 oxidized SRR001337 WT_females beta-eliminated V008 S2-DRSCS1 male headSRR001346 ago2 beta-eliminated SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies V002 IR+GSM180328 adult heads (female heads, male heads) SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies V001 IR-SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies S27 0-1d Pupae (w)GSM239052 S2 cells, non beta-eliminated S23 female body #2S9 0-1h #3 (7)GSM280087 S2cell (AGO2IP) S28 0-2d pupaeSRR031693_4 V076 ML-DmBG3-C2S21 disk #2SRR032092 mock oxidized SRR001340 IR beta-eliminated V098 dcr-2[L811fsX] ovaryS19 2-4day pupae #1S5 imaginal discS4 female bodySRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb V011 Sg4SRR032094 ago2 knockdown S3 male bodyGSM379050 Armi Heterozygote S18 3rd inster #2S20 2-4day pupae#2S10 2-6h #1 (8)SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1 S32 s2+48 #2SRR001342 WT_males beta-eliminated GSM467729 WT V081 embryo 2-6hrGSM379057 Krimp Mutant S35 KC+48 #2GSM246084 D. melanogaster adult male heads 454 GSM379060 SpnE Heterozygote S34 KC+48 #1GSM239050 fly heads, beta-eliminated GSM467730 r2d2 V009 CMEL1GSM280084 loqs-/- ovaries (18-29nt) V089 ago2[414] ovary total RNA  GSM280088 S2cell (AGO1IP) S17 3rd inster #1GSM379067 SpnE Mutant S26 1st instar #2GSM180335 imaginal discs GSM180329 adult bodies (female bodies, male bodies) V097 CS ovarySRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1 GSM343287 Drosophila Toll 10b mutant embryos SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1 GSM239051 S2 cells, beta-eliminated V088 r2d2[1] ovary total RNA  V010 MLDmD20c5GSM467731 loq SRR029032 r2d2 knockdown V033 CMEW1 Cl.8+ cellGSM379065 Zuc Heterozygote S13 6-10h #2 (11)GSM180334 larvae: 1st instar and 3rd instars S8 S2-48,+48, KC-48, +48 mixV075 ML-DmBG1-C1SRR029030 dcr-2 knockdown GSM180333 late embryo (12-24) V063 CS,ovary,AGO1IPS7 12-24hr embryoSRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb GSM379056 Krimp Heterozygote GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day SRR023197 RNA Library from S2 control cells SRR023402 total RNA extracted from NLS-P19 cells GSM379054 Flam Heterozygote V065 dcr-2[L811fsX], ovary, AGO1IPSRR014273 Ovary_rep1_Har_P GSM379064 Vasa Mutant GSM379055 Flam Mutant S25 1st instar #1GSM379051 Armi Mutant SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb GSM379061 Squ Heterozygote OSS6 Drosophila OSS cell small RNA libraries, rep2 GSM379059 V024 kc167 cellGSM379058 GSM280086 WT ovaries (AGO2IP) SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1 S11 2-6h #2 (9)V018 Kc167 cellSRR014282 Ovary_rep1 wK_P SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1 GSM180332 mid embryo (6-10) S14 0-1hr #1 (A)S16 KC -48 #1OSS8 Drosophila OSS cell small RNA libraries, rep4 V019 GM2 cellGSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries SRR029031 loqs-ORF knockdown S31 s2+48 #1SRR010957 Aub IP in Ago3 trans-heterozygotes SRR010952 Ago3 trans-heterozygotes, oxidized SRR029033 lacZ knockdown SRR010956 Piwi IP in Ago3 heterozygotes GSM424740 S2 pKF63 stably transfected SRR010954 Aub trans-heterozygotes, oxidized SRR023400 total RNA extracted from P19 cells GSM379063 Vasa Heterozygote V020 S2R+ cellSRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb SRR023407 RNA bound by NLS-P19 protein GSM180337 tissue culture cells (S2 only) SRR010960 wt, oxidized V066 r2d2[1], ovary, AGO1IPGSM379052 Aub Heterozygote SRR014275 Ovary_rep1 LK_P OSS2 Drosophila OSS cell small RNA libraries, rep1 GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries S33 KC-48 #2GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006) GSM379053 Aub Mutant SRR032095 AGO1 IP dcr2 knockdown SRR029029 dcr-1 knockdown V028 CMEW1 Cl.8+ cellSRR010959 Ago3 IP in heterozygotes SRR014280 Ovary_rep1 w1118_P V026 1182-4H cellGSM180331 early embryo (2-6) SRR014277 Ovary_rep1 NA_P OSS7 Drosophila OSS cell small RNA libraries, rep3 GSM180330 very early embryo (0-1) GSM424741 S2 pKF63 transiently transfected SRR032096 AGO2 IP dcr2 knockdownV021 ML-DmD21 cellS15 S2 -48 #1GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0 S30 s2-48 #2GSM379062 Squ Mutant V025 S2R+ cellSRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb SRR010958 Piwi IP in Ago3 trans-heterozygotes V067 S2-NPGSM280082 WT ovaries (18-29nt) SRR023399 RNA bound by P19 protein SRR010955 Aub IP in Ago3 heterozygotes GSM424739 S2 parental GSM280083 dcr-2-/- ovaries (18-29nt) SRR029028 untreated (mock) SRR032093 ago1 knockdown GSM280085 WT testes (18-24nt) S12 6-10h #1 (10)SRR010951 Ago3 heterozygotes, oxidized GSM379066 Zuc Mutant SRR010953 Aub heterozygotes, oxidized V064 ago2[414], ovary, AGO1IP
........................................................................TTCTATTCCGATTGAAACCGTCCAAA...............................................2611000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................AGGCGCGAGCATCTATCCA............1911000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................GCGAGCATCTATCCAAAAAGC......2111000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000