Page generated on Fri Oct 15 12:01:52 2010

dme-mir-967



dme-mir-967

View dme-mir-967 on miRBase

miRNA	Length	Perfect(sense)	Perfect(antisense)	5' moR	5'arm	Loop	3'arm	3' moR	Other	Loop Size	Mature	Star
dme-mir-967	146	617	2	5	507	1	101	2	3	33	507	101

ACCAAAAATGAGAACTGCAGGAGACTTGGAGAGCAGAGATACCTCTGGAGAAGCGCGTGACCTGACCCCAGCAGGAGAACCCAACCCGCTTTTCCACCTAGGTGTCTCTCTCTCTCTTTATCTGTTCCTCAGCTCGAGAGTGTGTA
...........................((((((.((((((((((.((((((((((.((..((((.......))))........)).))))))))))...))))))))))))))))...............................-42.40
((((....((((..(((.(((((....((((((.((((((((((.((((((((((.((..((((.......))))........)).))))))))))...))))))))))..)))))).......))))))))))))....)).)).-53.00
Sense strand

	Size	Blast	Total	SRR029028 untreated (mock)	V081 embryo 2-6hr	SRR029031 loqs-ORF knockdown	V019 GM2 cell	S33 KC-48 #2	V082 embryo 14-24hr	V067 S2-NP	SRR032093 ago1 knockdown	V098 dcr-2[L811fsX] ovary	SRR029029 dcr-1 knockdown	S32 s2+48 #2	SRR029633 total small RNAs from hen1 homozygous flies	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	V097 CS ovary	V021 ML-DmD21 cell	V025 S2R+ cell	SRR029032 r2d2 knockdown	S30 s2-48 #2	SRR029030 dcr-2 knockdown	SRR001345 ago2 non-beta-eliminated	S15 S2 -48 #1	V090 CS  male total RNA	V018 Kc167 cell	GSM280088 S2cell (AGO1IP)	SRR031696_2152	V083 male, one day	V024 kc167 cell	S31 s2+48 #1	S16 KC -48 #1	SRR029033 lacZ knockdown	S22 female head #1	V033 CMEW1 Cl.8+ cell	V008 S2-DRSC	S28 0-2d pupae	SRR031699 Total small RNAs from dcr-2 homozygous flies	V009 CMEL1	S13 6-10h #2 (11)	V076 ML-DmBG3-C2	SRR031703 Total small RNAs from r2d2 homozygous flies	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	SRR031701 Total small RNAs from r2d2 heterozygous flies	SRR032094 ago2 knockdown	V002 IR+	OSS8 Drosophila OSS cell small RNA libraries, rep4	SRR032096 AGO2 IP dcr2 knockdown	V075 ML-DmBG1-C1	V001 IR-	S35 KC+48 #2	S29 male head #1	SRR014282 Ovary_rep1 wK_P	SRR031692 Total small RNAs from Oregon R	GSM180328 adult heads (female heads, male heads)	V088 r2d2[1] ovary total RNA	GSM379055 Flam Mutant	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	GSM379061 Squ Heterozygote	OSS6 Drosophila OSS cell small RNA libraries, rep2	V064 ago2[414], ovary, AGO1IP	GSM280087 S2cell (AGO2IP)	S19 2-4day pupae #1	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	V063 CS,ovary,AGO1IP	SRR031693_4	GSM379050 Armi Heterozygote	V010 MLDmD20c5	V020 S2R+ cell	GSM379052 Aub Heterozygote	SRR001343 dcr-2 non-beta-eliminated	SRR014280 Ovary_rep1 w1118_P	V026 1182-4H cell	SRR014277 Ovary_rep1 NA_P	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	GSM343287 Drosophila Toll 10b mutant embryos	SRR001338 IR non-beta-eliminated	GSM467730 r2d2	V084 female, one day	S24 male body #2	GSM180332 mid embryo (6-10)	GSM379065 Zuc Heterozygote	SRR001349 heterozygous dcr-2_untreated	GSM180337 tissue culture cells (S2 only)	SRR010960 wt, oxidized	S18 3rd inster #2	V065 dcr-2[L811fsX], ovary, AGO1IP	GSM467731 loq	SRR014273 Ovary_rep1_Har_P	V089 ago2[414] ovary total RNA	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	SRR032095 AGO1 IP dcr2 knockdown	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	V028 CMEW1 Cl.8+ cell	GSM180331 early embryo (2-6)	OSS7 Drosophila OSS cell small RNA libraries, rep3	S5 imaginal disc	SRR001344 dcr-2 beta-eliminated	S21 disk #2	GSM379051 Armi Mutant	V011 Sg4	SRR001664 homozygous dcr-2_untreated	GSM379060 SpnE Heterozygote	S10 2-6h #1 (8)	S2 female head	GSM379059	S12 6-10h #1 (10)	S17 3rd inster #1	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	GSM379057 Krimp Mutant	GSM379067 SpnE Mutant	GSM379058	GSM280086 WT ovaries (AGO2IP)	SRR001347 ago2 untreated	S26 1st instar #2	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	S11 2-6h #2 (9)	GSM180333 late embryo (12-24)	GSM239051 S2 cells, beta-eliminated	S9 0-1h #3 (7)	S14 0-1hr #1 (A)	SRR001341 WT_males non-beta-eliminated	GSM180335 imaginal discs	S4 female body	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	S7 12-24hr embryo	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	GSM379056 Krimp Heterozygote	SRR010952 Ago3 trans-heterozygotes, oxidized	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	SRR001337 WT_females beta-eliminated	SRR023197 RNA Library from S2 control cells	SRR032092 mock oxidized	S23 female body #2	SRR010956 Piwi IP in Ago3 heterozygotes	GSM424740 S2 pKF63 stably transfected	SRR010954 Aub trans-heterozygotes, oxidized	SRR023400 total RNA extracted from P19 cells	GSM379063 Vasa Heterozygote	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	SRR023407 RNA bound by NLS-P19 protein	SRR023402 total RNA extracted from NLS-P19 cells	V066 r2d2[1], ovary, AGO1IP	SRR001340 IR beta-eliminated	GSM280084 loqs-/- ovaries (18-29nt)	GSM379054 Flam Heterozygote	SRR014275 Ovary_rep1 LK_P	S34 KC+48 #1	OSS2 Drosophila OSS cell small RNA libraries, rep1	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	S1 male head	GSM467729 WT	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	SRR001342 WT_males beta-eliminated	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM379064 Vasa Mutant	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM379053 Aub Mutant	GSM246084 D. melanogaster adult male heads 454	GSM239050 fly heads, beta-eliminated	GSM180334 larvae: 1st instar and 3rd instars	S3 male body	SRR010959 Ago3 IP in heterozygotes	S25 1st instar #1	S8 S2-48,+48, KC-48, +48 mix	GSM180330 very early embryo (0-1)	GSM424741 S2 pKF63 transiently transfected	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	SRR001339 WT_females non-beta-eliminated	SRR001348 ago2 oxidized	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	GSM379062 Squ Mutant	S20 2-4day pupae#2	SRR010958 Piwi IP in Ago3 trans-heterozygotes	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	GSM280082 WT ovaries (18-29nt)	SRR023399 RNA bound by P19 protein	SRR010955 Aub IP in Ago3 heterozygotes	S27 0-1d Pupae (w)	GSM239052 S2 cells, non beta-eliminated	GSM239041 fly heads, non beta-eliminated	GSM424739 S2 parental	GSM280083 dcr-2-/- ovaries (18-29nt)	GSM280085 WT testes (18-24nt)	GSM180329 adult bodies (female bodies, male bodies)	SRR001346 ago2 beta-eliminated	SRR010951 Ago3 heterozygotes, oxidized	GSM379066 Zuc Mutant	SRR010953 Aub heterozygotes, oxidized
......AATGAGAACTGCAGGAGACTTGGAG...................................................................................................................	25	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............AACTGCAGGAGACTTGGAG...................................................................................................................	19	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............CTGCAGGAGACTTGGAGAGCAGAG............................................................................................................	24	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................CAGGAGACTTGGAGAGCA...............................................................................................................	18	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................GGAGACTTGGAGAGCAGAGATA.........................................................................................................	22	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................TGGAGAGCAGAGATACCTCTGGA.................................................................................................	23	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................CAGAGATACCTCTGGAGAAGCG...........................................................................................	22	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................AGAGATACCTCTGGAGAAG.............................................................................................	19	1	3	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................AGAGATACCTCTGGAGAAGCGCGT........................................................................................	24	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................AGAGATACCTCTGGAGAAGC............................................................................................	20	1	44	3	0	1	3	5	0	2	0	1	0	0	1	3	0	2	3	0	0	0	1	0	0	1	0	1	1	0	2	0	0	0	0	1	2	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	1	1	1	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................AGAGATACCTCTGGAGAAGCG...........................................................................................	21	1	380	19	21	24	14	15	18	11	15	10	15	5	6	8	6	7	5	11	2	5	7	3	7	6	5	2	6	4	5	3	7	1	5	2	0	3	3	2	3	3	4	4	0	3	4	3	3	4	3	2	4	1	0	3	2	3	1	1	2	2	3	2	0	0	2	2	2	1	1	0	1	2	1	0	0	1	0	0	2	0	0	1	0	1	0	1	0	0	1	1	0	0	0	1	0	1	0	1	1	1	1	1	1	1	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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........................................................................................CTTTTCCACCTAGGTGTCTCT.....................................	21	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................CTTTTCCACCTAGGTGTCT.......................................	19	1	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................CTTTTCCACCTAGGTGTC........................................	18	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................ATCTGTTCCTCAGCTCGAGA.......	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Antisense strand

	Size	Blast	Total	SRR029028 untreated (mock)	V081 embryo 2-6hr	SRR029031 loqs-ORF knockdown	V019 GM2 cell	S33 KC-48 #2	V082 embryo 14-24hr	V067 S2-NP	SRR032093 ago1 knockdown	V098 dcr-2[L811fsX] ovary	SRR029029 dcr-1 knockdown	S32 s2+48 #2	SRR029633 total small RNAs from hen1 homozygous flies	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	V097 CS ovary	V021 ML-DmD21 cell	V025 S2R+ cell	SRR029032 r2d2 knockdown	S30 s2-48 #2	SRR029030 dcr-2 knockdown	SRR001345 ago2 non-beta-eliminated	S15 S2 -48 #1	V090 CS  male total RNA	V018 Kc167 cell	GSM280088 S2cell (AGO1IP)	SRR031696_2152	V083 male, one day	V024 kc167 cell	S31 s2+48 #1	S16 KC -48 #1	SRR029033 lacZ knockdown	S22 female head #1	V033 CMEW1 Cl.8+ cell	V008 S2-DRSC	S28 0-2d pupae	SRR031699 Total small RNAs from dcr-2 homozygous flies	V009 CMEL1	S13 6-10h #2 (11)	V076 ML-DmBG3-C2	SRR031703 Total small RNAs from r2d2 homozygous flies	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	SRR031701 Total small RNAs from r2d2 heterozygous flies	SRR032094 ago2 knockdown	V002 IR+	OSS8 Drosophila OSS cell small RNA libraries, rep4	SRR032096 AGO2 IP dcr2 knockdown	V075 ML-DmBG1-C1	V001 IR-	S35 KC+48 #2	S29 male head #1	SRR014282 Ovary_rep1 wK_P	SRR031692 Total small RNAs from Oregon R	GSM180328 adult heads (female heads, male heads)	V088 r2d2[1] ovary total RNA	GSM379055 Flam Mutant	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	GSM379061 Squ Heterozygote	OSS6 Drosophila OSS cell small RNA libraries, rep2	V064 ago2[414], ovary, AGO1IP	GSM280087 S2cell (AGO2IP)	S19 2-4day pupae #1	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	V063 CS,ovary,AGO1IP	SRR031693_4	GSM379050 Armi Heterozygote	V010 MLDmD20c5	V020 S2R+ cell	GSM379052 Aub Heterozygote	SRR001343 dcr-2 non-beta-eliminated	SRR014280 Ovary_rep1 w1118_P	V026 1182-4H cell	SRR014277 Ovary_rep1 NA_P	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	GSM343287 Drosophila Toll 10b mutant embryos	SRR001338 IR non-beta-eliminated	GSM467730 r2d2	V084 female, one day	S24 male body #2	GSM180332 mid embryo (6-10)	GSM379065 Zuc Heterozygote	SRR001349 heterozygous dcr-2_untreated	GSM180337 tissue culture cells (S2 only)	SRR010960 wt, oxidized	S18 3rd inster #2	V065 dcr-2[L811fsX], ovary, AGO1IP	GSM467731 loq	SRR014273 Ovary_rep1_Har_P	V089 ago2[414] ovary total RNA	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	SRR032095 AGO1 IP dcr2 knockdown	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	V028 CMEW1 Cl.8+ cell	GSM180331 early embryo (2-6)	OSS7 Drosophila OSS cell small RNA libraries, rep3	S5 imaginal disc	SRR001344 dcr-2 beta-eliminated	S21 disk #2	GSM379051 Armi Mutant	V011 Sg4	SRR001664 homozygous dcr-2_untreated	GSM379060 SpnE Heterozygote	S10 2-6h #1 (8)	S2 female head	GSM379059	S12 6-10h #1 (10)	S17 3rd inster #1	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	GSM379057 Krimp Mutant	GSM379067 SpnE Mutant	GSM379058	GSM280086 WT ovaries (AGO2IP)	SRR001347 ago2 untreated	S26 1st instar #2	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	S11 2-6h #2 (9)	GSM180333 late embryo (12-24)	GSM239051 S2 cells, beta-eliminated	S9 0-1h #3 (7)	S14 0-1hr #1 (A)	SRR001341 WT_males non-beta-eliminated	GSM180335 imaginal discs	S4 female body	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	S7 12-24hr embryo	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	GSM379056 Krimp Heterozygote	SRR010952 Ago3 trans-heterozygotes, oxidized	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	SRR001337 WT_females beta-eliminated	SRR023197 RNA Library from S2 control cells	SRR032092 mock oxidized	S23 female body #2	SRR010956 Piwi IP in Ago3 heterozygotes	GSM424740 S2 pKF63 stably transfected	SRR010954 Aub trans-heterozygotes, oxidized	SRR023400 total RNA extracted from P19 cells	GSM379063 Vasa Heterozygote	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	SRR023407 RNA bound by NLS-P19 protein	SRR023402 total RNA extracted from NLS-P19 cells	V066 r2d2[1], ovary, AGO1IP	SRR001340 IR beta-eliminated	GSM280084 loqs-/- ovaries (18-29nt)	GSM379054 Flam Heterozygote	SRR014275 Ovary_rep1 LK_P	S34 KC+48 #1	OSS2 Drosophila OSS cell small RNA libraries, rep1	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	S1 male head	GSM467729 WT	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	SRR001342 WT_males beta-eliminated	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries	GSM379064 Vasa Mutant	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM379053 Aub Mutant	GSM246084 D. melanogaster adult male heads 454	GSM239050 fly heads, beta-eliminated	GSM180334 larvae: 1st instar and 3rd instars	S3 male body	SRR010959 Ago3 IP in heterozygotes	S25 1st instar #1	S8 S2-48,+48, KC-48, +48 mix	GSM180330 very early embryo (0-1)	GSM424741 S2 pKF63 transiently transfected	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	SRR001339 WT_females non-beta-eliminated	SRR001348 ago2 oxidized	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	GSM379062 Squ Mutant	S20 2-4day pupae#2	SRR010958 Piwi IP in Ago3 trans-heterozygotes	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	GSM280082 WT ovaries (18-29nt)	SRR023399 RNA bound by P19 protein	SRR010955 Aub IP in Ago3 heterozygotes	S27 0-1d Pupae (w)	GSM239052 S2 cells, non beta-eliminated	GSM239041 fly heads, non beta-eliminated	GSM424739 S2 parental	GSM280083 dcr-2-/- ovaries (18-29nt)	GSM280085 WT testes (18-24nt)	GSM180329 adult bodies (female bodies, male bodies)	SRR001346 ago2 beta-eliminated	SRR010951 Ago3 heterozygotes, oxidized	GSM379066 Zuc Mutant	SRR010953 Aub heterozygotes, oxidized
..........AGAACTGCAGGAGACTTGGAGA..................................................................................................................	22	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................TCTCTCTCTTTATCTGTTCCTCAGC.............	25	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0