Page generated on Fri Oct 15 12:01:28 2010

dme-mir-998



dme-mir-998

View dme-mir-998 on miRBase

miRNA	Length	Perfect(sense)	Perfect(antisense)	5' moR	5'arm	Loop	3'arm	3' moR	Other	Loop Size	Mature	Star
dme-mir-998	192	417640	20	41	35033	82	382436	3	65	54	382436	35033

ACCCGCCGCCTCGTCAGCAATCGTCCTCGTGTCAAATTCATTTTGGAACTGAATTCTCGTGGGTCTGCACTGACAACACTGACCGCTCCAGGGCAAATTGTTCATTTTGAAATTGAAATTCTGTAGCACCATGAGATTCAGCTCTGGCGTGAATTTCAAACATGCATCCACAACATCTCTCGCTCTATCAGC
...........................(((((.((((((((.(..((.((((((.((((((((((......)))..........(((.(((((.......(((.....))).......))))).))).))))))))))))).))..).))))))))...)))))............................-43.44
....((.((.......)).........(((((.((((((((.(..((.((((((.((((((((((......)))..........(((.(((((.......(((.....))).......))))).))).))))))))))))).))..).))))))))...))))).................)).........-45.04
Sense strand

	Size	Blast	Total	V076 ML-DmBG3-C2	V098 dcr-2[L811fsX] ovary	V097 CS ovary	V065 dcr-2[L811fsX], ovary, AGO1IP	V063 CS,ovary,AGO1IP	V064 ago2[414], ovary, AGO1IP	V081 embryo 2-6hr	V024 kc167 cell	V066 r2d2[1], ovary, AGO1IP	S32 s2+48 #2	V088 r2d2[1] ovary total RNA	V011 Sg4	S33 KC-48 #2	V018 Kc167 cell	V089 ago2[414] ovary total RNA	SRR032095 AGO1 IP dcr2 knockdown	S31 s2+48 #1	V082 embryo 14-24hr	V033 CMEW1 Cl.8+ cell	V025 S2R+ cell	V028 CMEW1 Cl.8+ cell	S30 s2-48 #2	SRR029028 untreated (mock)	V021 ML-DmD21 cell	S16 KC -48 #1	GSM424740 S2 pKF63 stably transfected	GSM379065 Zuc Heterozygote	V020 S2R+ cell	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	V067 S2-NP	V019 GM2 cell	GSM379064 Vasa Mutant	V002 IR+	GSM280088 S2cell (AGO1IP)	SRR031696_2152	GSM424739 S2 parental	S15 S2 -48 #1	S29 male head #1	V009 CMEL1	SRR029030 dcr-2 knockdown	GSM379057 Krimp Mutant	V008 S2-DRSC	V001 IR-	S13 6-10h #2 (11)	SRR014280 Ovary_rep1 w1118_P	GSM379066 Zuc Mutant	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	GSM379056 Krimp Heterozygote	SRR029633 total small RNAs from hen1 homozygous flies	V026 1182-4H cell	GSM379063 Vasa Heterozygote	SRR014282 Ovary_rep1 wK_P	S35 KC+48 #2	OSS6 Drosophila OSS cell small RNA libraries, rep2	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	S22 female head #1	OSS2 Drosophila OSS cell small RNA libraries, rep1	S21 disk #2	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	V090 CS  male total RNA	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	SRR032093 ago1 knockdown	GSM379062 Squ Mutant	S12 6-10h #1 (10)	V010 MLDmD20c5	GSM379058	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	OSS7 Drosophila OSS cell small RNA libraries, rep3	GSM379060 SpnE Heterozygote	GSM379051 Armi Mutant	SRR031699 Total small RNAs from dcr-2 homozygous flies	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR029032 r2d2 knockdown	SRR014273 Ovary_rep1_Har_P	SRR031703 Total small RNAs from r2d2 homozygous flies	SRR014275 Ovary_rep1 LK_P	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	GSM379052 Aub Heterozygote	SRR029033 lacZ knockdown	SRR031701 Total small RNAs from r2d2 heterozygous flies	GSM379054 Flam Heterozygote	SRR031692 Total small RNAs from Oregon R	S10 2-6h #1 (8)	S34 KC+48 #1	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	V075 ML-DmBG1-C1	GSM379050 Armi Heterozygote	OSS8 Drosophila OSS cell small RNA libraries, rep4	S19 2-4day pupae #1	SRR014277 Ovary_rep1 NA_P	S28 0-2d pupae	GSM280083 dcr-2-/- ovaries (18-29nt)	GSM379053 Aub Mutant	S5 imaginal disc	SRR001345 ago2 non-beta-eliminated	SRR032094 ago2 knockdown	SRR029031 loqs-ORF knockdown	S8 S2-48,+48, KC-48, +48 mix	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	V083 male, one day	SRR032092 mock oxidized	GSM379061 Squ Heterozygote	SRR001338 IR non-beta-eliminated	GSM379067 SpnE Mutant	S27 0-1d Pupae (w)	V084 female, one day	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	SRR031693_4	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	S2 female head	S9 0-1h #3 (7)	SRR001347 ago2 untreated	SRR001349 heterozygous dcr-2_untreated	S23 female body #2	SRR001664 homozygous dcr-2_untreated	S24 male body #2	S11 2-6h #2 (9)	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	S14 0-1hr #1 (A)	GSM379059	GSM280082 WT ovaries (18-29nt)	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	GSM467729 WT	GSM280084 loqs-/- ovaries (18-29nt)	S17 3rd inster #1	GSM424741 S2 pKF63 transiently transfected	S1 male head	SRR001344 dcr-2 beta-eliminated	SRR029029 dcr-1 knockdown	GSM343287 Drosophila Toll 10b mutant embryos	GSM379055 Flam Mutant	S7 12-24hr embryo	GSM239052 S2 cells, non beta-eliminated	SRR032096 AGO2 IP dcr2 knockdown	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	GSM280087 S2cell (AGO2IP)	GSM239041 fly heads, non beta-eliminated	SRR001343 dcr-2 non-beta-eliminated	GSM180335 imaginal discs	S18 3rd inster #2	S4 female body	S20 2-4day pupae#2	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	GSM180337 tissue culture cells (S2 only)	GSM180328 adult heads (female heads, male heads)	GSM180332 mid embryo (6-10)	SRR010960 wt, oxidized	GSM467730 r2d2	GSM280085 WT testes (18-24nt)	GSM180331 early embryo (2-6)	SRR023400 total RNA extracted from P19 cells	GSM239051 S2 cells, beta-eliminated	GSM467731 loq	S3 male body	SRR001348 ago2 oxidized	GSM180333 late embryo (12-24)	GSM239050 fly heads, beta-eliminated	SRR010952 Ago3 trans-heterozygotes, oxidized	SRR010953 Aub heterozygotes, oxidized	SRR023399 RNA bound by P19 protein	SRR010954 Aub trans-heterozygotes, oxidized	SRR010959 Ago3 IP in heterozygotes	SRR010958 Piwi IP in Ago3 trans-heterozygotes	S25 1st instar #1	SRR001337 WT_females beta-eliminated	GSM180334 larvae: 1st instar and 3rd instars	SRR010955 Aub IP in Ago3 heterozygotes	S26 1st instar #2	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023407 RNA bound by NLS-P19 protein	SRR010956 Piwi IP in Ago3 heterozygotes	SRR023197 RNA Library from S2 control cells	GSM180330 very early embryo (0-1)	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	GSM180329 adult bodies (female bodies, male bodies)	SRR010951 Ago3 heterozygotes, oxidized	SRR001346 ago2 beta-eliminated	SRR023402 total RNA extracted from NLS-P19 cells	SRR001340 IR beta-eliminated	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	GSM280086 WT ovaries (AGO2IP)	GSM246084 D. melanogaster adult male heads 454	SRR001342 WT_males beta-eliminated	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries
...CGCCGCCTCGTCAGCAAT...........................................................................................................................................................................	18	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............GTCAGCAATCGTCCTCGT..................................................................................................................................................................	18	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................TCGTCCTCGTGTCAAATTCATTTTGGA.................................................................................................................................................	27	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................CTCGTGTCAAATTCATTTTGGA.................................................................................................................................................	22	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................TCGTGTCAAATTCATTTTGGA.................................................................................................................................................	21	1	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................CGTGTCAAATTCATTTTGGA.................................................................................................................................................	20	1	14	0	1	0	0	0	0	1	0	0	0	3	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................GTGTCAAATTCATTTTGGA.................................................................................................................................................	19	1	16	0	0	3	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................AAATTCATTTTGGAACTGAATT.........................................................................................................................................	22	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................TTTGGAACTGAATTCTCGTGGGTCTGCAC..........................................................................................................................	29	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................TGGAACTGAATTCTCGTGG..................................................................................................................................	19	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................TGGAACTGAATTCTCGTGGG.................................................................................................................................	20	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................TGGAACTGAATTCTCGTGGGTCT..............................................................................................................................	23	1	27	0	0	0	0	0	1	0	1	0	1	0	1	0	0	0	0	2	1	0	0	0	0	0	0	2	0	0	0	0	0	0	1	1	0	2	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	2	0	1	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................TGGAACTGAATTCTCGTGGGT................................................................................................................................	21	1	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..........................................................................................................................GTAGCACCATGAGATTCAGCTC................................................	22	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAGCACCATGAGATTCAGCTCTG..............................................	23	1	14	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAGCACCATGAGATTCAGCTCTGG.............................................	24	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAGCACCATGAGATTCAGCTCT...............................................	22	1	3849	170	50	52	59	68	95	22	200	36	129	34	249	102	185	35	41	93	17	42	62	20	36	41	68	40	98	16	49	12	27	78	11	5	18	135	0	44	41	62	13	24	95	3	7	10	8	39	11	42	27	11	6	24	20	7	8	27	7	19	12	4	5	8	2	22	11	1	18	13	5	59	37	16	7	80	4	3	11	28	77	9	39	2	14	15	12	8	16	10	9	16	5	4	7	54	0	1	9	2	3	0	5	14	7	10	4	0	1	2	6	5	26	43	1	19	2	1	0	4	4	2	0	9	4	1	0	0	9	0	0	1	1	8	1	11	11	0	1	6	0	0	2	2	0	3	1	0	0	3	0	0	0	0	4	1	3	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................TAGCACCATGAGATTCAG...................................................	18	1	459	76	6	4	0	3	1	6	19	3	13	1	6	7	11	1	41	10	2	20	2	4	8	11	6	1	0	0	7	3	2	12	1	4	0	1	0	3	7	3	15	0	0	3	1	1	1	7	0	4	2	3	1	2	10	2	2	7	0	0	1	0	5	3	0	2	0	0	8	2	1	2	2	0	1	0	1	0	0	0	1	0	1	0	1	0	4	2	8	0	2	0	5	0	1	0	6	6	2	0	2	0	0	0	1	0	0	1	0	0	2	2	0	1	0	0	0	0	0	0	1	1	1	0	0	0	0	2	0	5	0	0	0	0	1	1	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
...........................................................................................................................TAGCACCATGAGATTCAGCTC................................................	21	1	317245	18182	20748	15510	13947	12753	12370	12238	9063	9747	5601	9001	8400	4937	6289	6196	2219	3812	5789	4153	3751	3821	2751	3149	3198	1940	2149	3124	2880	2958	2393	2539	2881	3034	2247	2802	1428	1757	1316	2529	1715	2234	1997	2510	2212	2309	2284	2010	1898	1235	1732	1856	1658	821	1397	1552	887	1326	1296	1502	1317	1399	594	1488	1094	1195	1465	176	1136	1325	1256	1216	1108	971	1209	1009	1097	1092	1168	864	774	1133	792	512	703	1008	914	997	809	641	825	576	870	845	670	699	596	448	476	126	579	106	639	495	640	460	522	427	140	518	300	412	498	449	389	458	205	410	390	237	388	340	151	108	268	156	95	181	215	124	0	194	194	154	30	121	121	52	141	113	113	90	89	82	47	61	48	82	1	64	45	57	14	0	17	20	50	55	5	1	0	6	0	39	24	24	12	20	14	19	4	4	16	8	12	16	9	0	14	0	7	5	0	3	0	2	0	0	0	0
...........................................................................................................................TAGCACCATGAGATTCAGCT.................................................	20	1	57651	6340	2848	1658	1420	1187	1256	408	2227	714	2642	742	743	856	1200	662	4279	1242	274	944	611	769	802	1079	569	331	1514	492	365	348	758	542	376	178	940	167	1692	505	154	315	963	473	498	158	75	231	206	190	239	250	338	178	182	110	300	189	61	290	81	147	230	176	236	120	93	271	109	39	241	119	147	124	154	401	148	221	155	116	112	326	143	110	158	43	49	126	171	106	173	84	130	44	95	96	31	117	220	317	97	39	74	185	68	103	66	45	65	64	45	65	24	55	84	76	40	55	27	10	57	27	36	27	26	13	35	33	228	26	42	92	196	16	10	36	138	33	33	31	8	28	2	4	9	6	8	23	7	1	0	7	9	2	1	5	4	5	4	3	0	0	8	1	0	1	1	3	8	1	0	1	0	0	0	0	0	0	1	0	2	0	0	3	3	0	1	0	0	0	0	0
...........................................................................................................................TAGCACCATGAGATTCAGC..................................................	19	1	1544	213	16	7	9	20	13	5	64	12	46	22	23	32	47	6	65	21	8	40	19	24	21	29	21	16	0	4	17	20	12	54	2	4	13	5	0	8	1	19	42	9	27	0	5	5	9	4	8	7	7	4	9	4	29	0	5	35	1	4	4	4	11	7	5	26	3	6	35	2	5	3	3	0	3	3	5	6	7	18	8	4	3	1	1	4	11	2	20	2	6	1	4	3	0	1	19	4	3	5	3	0	1	6	2	3	1	0	1	5	1	2	0	0	0	2	2	0	4	0	4	5	8	1	1	0	0	1	0	10	8	1	0	3	1	2	2	0	0	0	0	0	0	1	3	0	0	0	0	0	3	0	0	0	0	0	9	0	0	0	6	0	11	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................AGCACCATGAGATTCAGCT.................................................	19	1	175	4	1	1	4	6	10	0	2	2	5	1	3	0	2	1	18	3	0	7	3	8	4	2	0	2	0	0	2	1	6	1	0	1	6	1	0	1	0	2	17	0	1	0	0	1	1	0	0	2	0	0	0	1	0	0	0	0	1	0	0	2	1	1	0	6	0	0	1	0	0	2	3	8	0	1	0	0	0	0	1	0	3	0	0	0	0	0	2	0	0	0	0	0	0	1	0	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................AGCACCATGAGATTCAGCTC................................................	20	1	641	5	18	20	23	40	35	11	13	21	14	10	8	0	6	14	3	8	5	7	7	7	7	4	4	1	0	6	5	3	9	2	1	12	8	34	0	4	0	4	9	2	5	6	1	2	1	4	1	22	4	1	2	0	6	2	0	9	2	4	1	1	2	3	5	2	3	1	3	2	1	16	14	0	2	20	1	3	1	0	18	1	10	0	2	1	1	0	3	0	3	1	1	1	0	11	0	1	1	1	0	0	0	1	1	1	1	0	3	0	0	0	1	4	0	2	0	0	0	0	0	0	1	1	1	0	0	0	4	11	0	2	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................AGCACCATGAGATTCAGC..................................................	18	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................AGCACCATGAGATTCAGCTCT...............................................	21	1	18	0	0	0	0	0	1	0	1	1	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................GCACCATGAGATTCAGCTC................................................	19	1	589	5	3	5	8	33	12	2	2	3	69	1	5	53	4	4	1	38	7	3	3	1	23	1	0	30	0	1	2	2	2	1	0	1	0	0	0	33	13	1	0	0	1	3	38	2	0	0	0	1	0	0	0	5	0	1	24	0	21	1	1	0	0	0	10	0	0	0	0	0	0	0	1	1	0	2	0	0	0	15	0	0	1	7	8	0	0	0	1	9	1	2	0	0	6	0	0	1	4	1	0	0	1	1	1	6	0	0	0	0	3	6	0	0	4	0	2	1	0	8	0	0	0	0	0	8	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................................................GCACCATGAGATTCAGCT.................................................	18	1	75	1	0	2	0	0	1	0	0	0	26	0	0	5	1	0	3	12	0	1	1	0	6	0	0	1	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................GCACCATGAGATTCAGCTCT...............................................	20	1	10	0	0	0	0	0	0	0	1	0	4	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................CACCATGAGATTCAGCTC................................................	18	1	129	9	3	3	0	8	0	4	4	0	2	0	0	2	0	0	2	0	3	0	0	0	0	15	0	0	0	0	0	0	0	0	0	0	1	2	0	1	0	1	27	0	0	1	2	0	1	0	0	0	0	3	2	0	0	1	0	2	0	0	0	0	2	0	0	0	0	0	2	0	1	1	4	0	0	0	1	0	1	3	0	1	2	0	0	0	0	2	0	0	1	0	0	0	0	0	5	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................CACCATGAGATTCAGCTCT...............................................	19	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................ACCATGAGATTCAGCTCT...............................................	18	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TGAGATTCAGCTCTGGCGTGA........................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................AGATTCAGCTCTGGCGTGA........................................	19	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................TGGCGTGAATTTCAAACATG............................	20	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................TGGCGTGAATTTCAAACATGCA..........................	22	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Antisense strand

	Size	Blast	Total	V076 ML-DmBG3-C2	V098 dcr-2[L811fsX] ovary	V097 CS ovary	V065 dcr-2[L811fsX], ovary, AGO1IP	V063 CS,ovary,AGO1IP	V064 ago2[414], ovary, AGO1IP	V081 embryo 2-6hr	V024 kc167 cell	V066 r2d2[1], ovary, AGO1IP	S32 s2+48 #2	V088 r2d2[1] ovary total RNA	V011 Sg4	S33 KC-48 #2	V018 Kc167 cell	V089 ago2[414] ovary total RNA	SRR032095 AGO1 IP dcr2 knockdown	S31 s2+48 #1	V082 embryo 14-24hr	V033 CMEW1 Cl.8+ cell	V025 S2R+ cell	V028 CMEW1 Cl.8+ cell	S30 s2-48 #2	SRR029028 untreated (mock)	V021 ML-DmD21 cell	S16 KC -48 #1	GSM424740 S2 pKF63 stably transfected	GSM379065 Zuc Heterozygote	V020 S2R+ cell	SRR014281 Ovary_rep1 wK(fem)_x_w1118(male)_F1	V067 S2-NP	V019 GM2 cell	GSM379064 Vasa Mutant	V002 IR+	GSM280088 S2cell (AGO1IP)	SRR031696_2152	GSM424739 S2 parental	S15 S2 -48 #1	S29 male head #1	V009 CMEL1	SRR029030 dcr-2 knockdown	GSM379057 Krimp Mutant	V008 S2-DRSC	V001 IR-	S13 6-10h #2 (11)	SRR014280 Ovary_rep1 w1118_P	GSM379066 Zuc Mutant	SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb	GSM379056 Krimp Heterozygote	SRR029633 total small RNAs from hen1 homozygous flies	V026 1182-4H cell	GSM379063 Vasa Heterozygote	SRR014282 Ovary_rep1 wK_P	S35 KC+48 #2	OSS6 Drosophila OSS cell small RNA libraries, rep2	SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1	S22 female head #1	OSS2 Drosophila OSS cell small RNA libraries, rep1	S21 disk #2	SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1	V090 CS  male total RNA	SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1	SRR032093 ago1 knockdown	GSM379062 Squ Mutant	S12 6-10h #1 (10)	V010 MLDmD20c5	GSM379058	SRR031702 2-O-methylated small RNAs from r2d2 heterozygous flies	OSS7 Drosophila OSS cell small RNA libraries, rep3	GSM379060 SpnE Heterozygote	GSM379051 Armi Mutant	SRR031699 Total small RNAs from dcr-2 homozygous flies	SRR031697 Total small RNAs from dcr-2 heterozygous flies	SRR029032 r2d2 knockdown	SRR014273 Ovary_rep1_Har_P	SRR031703 Total small RNAs from r2d2 homozygous flies	SRR014275 Ovary_rep1 LK_P	SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb	GSM379052 Aub Heterozygote	SRR029033 lacZ knockdown	SRR031701 Total small RNAs from r2d2 heterozygous flies	GSM379054 Flam Heterozygote	SRR031692 Total small RNAs from Oregon R	S10 2-6h #1 (8)	S34 KC+48 #1	SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb	V075 ML-DmBG1-C1	GSM379050 Armi Heterozygote	OSS8 Drosophila OSS cell small RNA libraries, rep4	S19 2-4day pupae #1	SRR014277 Ovary_rep1 NA_P	S28 0-2d pupae	GSM280083 dcr-2-/- ovaries (18-29nt)	GSM379053 Aub Mutant	S5 imaginal disc	SRR001345 ago2 non-beta-eliminated	SRR032094 ago2 knockdown	SRR029031 loqs-ORF knockdown	S8 S2-48,+48, KC-48, +48 mix	SRR031698 2-O-methylated small RNAs from dcr-2 heterozygous flies	V083 male, one day	SRR032092 mock oxidized	GSM379061 Squ Heterozygote	SRR001338 IR non-beta-eliminated	GSM379067 SpnE Mutant	S27 0-1d Pupae (w)	V084 female, one day	SRR014278 Ovary_rep1 w1118(fem)_x_Har(male)_F1	SRR031693_4	SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb	S2 female head	S9 0-1h #3 (7)	SRR001347 ago2 untreated	SRR001349 heterozygous dcr-2_untreated	S23 female body #2	SRR001664 homozygous dcr-2_untreated	S24 male body #2	S11 2-6h #2 (9)	SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb	S14 0-1hr #1 (A)	GSM379059	GSM280082 WT ovaries (18-29nt)	SRR031704 2-O-methylated small RNAs from r2d2 homozygous flies	GSM467729 WT	GSM280084 loqs-/- ovaries (18-29nt)	S17 3rd inster #1	GSM424741 S2 pKF63 transiently transfected	S1 male head	SRR001344 dcr-2 beta-eliminated	SRR029029 dcr-1 knockdown	GSM343287 Drosophila Toll 10b mutant embryos	GSM379055 Flam Mutant	S7 12-24hr embryo	GSM239052 S2 cells, non beta-eliminated	SRR032096 AGO2 IP dcr2 knockdown	SRR001341 WT_males non-beta-eliminated	SRR001339 WT_females non-beta-eliminated	GSM280087 S2cell (AGO2IP)	GSM239041 fly heads, non beta-eliminated	SRR001343 dcr-2 non-beta-eliminated	GSM180335 imaginal discs	S18 3rd inster #2	S4 female body	S20 2-4day pupae#2	SRR031700 2-O-methylated small RNAs from dcr-2 homozygous flies	GSM180337 tissue culture cells (S2 only)	GSM180328 adult heads (female heads, male heads)	GSM180332 mid embryo (6-10)	SRR010960 wt, oxidized	GSM467730 r2d2	GSM280085 WT testes (18-24nt)	GSM180331 early embryo (2-6)	SRR023400 total RNA extracted from P19 cells	GSM239051 S2 cells, beta-eliminated	GSM467731 loq	S3 male body	SRR001348 ago2 oxidized	GSM180333 late embryo (12-24)	GSM239050 fly heads, beta-eliminated	SRR010952 Ago3 trans-heterozygotes, oxidized	SRR010953 Aub heterozygotes, oxidized	SRR023399 RNA bound by P19 protein	SRR010954 Aub trans-heterozygotes, oxidized	SRR010959 Ago3 IP in heterozygotes	SRR010958 Piwi IP in Ago3 trans-heterozygotes	S25 1st instar #1	SRR001337 WT_females beta-eliminated	GSM180334 larvae: 1st instar and 3rd instars	SRR010955 Aub IP in Ago3 heterozygotes	S26 1st instar #2	SRR010957 Aub IP in Ago3 trans-heterozygotes	SRR023407 RNA bound by NLS-P19 protein	SRR010956 Piwi IP in Ago3 heterozygotes	SRR023197 RNA Library from S2 control cells	GSM180330 very early embryo (0-1)	GSM180336 pupae: 0-1 day, 0-2 day, 2-4 day	GSM180329 adult bodies (female bodies, male bodies)	SRR010951 Ago3 heterozygotes, oxidized	SRR001346 ago2 beta-eliminated	SRR023402 total RNA extracted from NLS-P19 cells	SRR001340 IR beta-eliminated	GSM266765 Siomi Lab fruit fly S2 AGO2 Cloned Sequences v1.0	GSM280086 WT ovaries (AGO2IP)	GSM246084 D. melanogaster adult male heads 454	SRR001342 WT_males beta-eliminated	GSM231091 PIWI-associated piRNA in Drosophila melanogaster ovary (454 Pyrosequencing, 2006)	GSM154621 piRNAs associated with Ago3 from Drosophila melanogaster ovaries	GSM154622 piRNAs associated with Aubergine from Drosophila melanogaster ovaries	GSM154620 piRNAs associated with Piwi from Drosophila melanogaster ovaries	GSM154618 23-29 nucleotide RNAs from Drosophila melanogaster ovaries
....GCCGCCTCGTCAGCAATCGTC.......................................................................................................................................................................	21	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....CCGCCTCGTCAGCAATCGTC.......................................................................................................................................................................	20	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............CAGCAATCGTCCTCGTGTCAA.............................................................................................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................CTCGTGGGTCTGCACTGACAACA..................................................................................................................	23	1	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................GGGTCTGCACTGACAACACTG...............................................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................GCACTGACAACACTGACCGCT.........................................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................GGCAAATTGTTCATTTTGAAA................................................................................	21	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................AGCACCATGAGATTCAGCTCT...............................................	21	1	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0