| Size | Blast | Total Norm | V098 dcr-2[L811fsX] ovary modENCODE_2975 | V097 CS ovary modENCODE_2976 | V064 ago2[414], ovary, AGO1IP modENCODE_2746 | V067 S2-NP modENCODE_2375 | SRR029028 untreated (mock) | V081 embryo 2-6hr modENCODE_2742 | V065 dcr-2[L811fsX], ovary, AGO1IP modENCODE_2833 | V033 CMEW1 Cl.8+ cell modENCODE_2721 | SRR029030 dcr-2 knockdown | SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb | V090 CS male total RNA modENCODE_2751 | V082 embryo 14-24hr modENCODE_2743 | SRR014280 Ovary_rep1 w1118_P | V020 S2R+ cell modENCODE_2608 | V025 S2R+ cell modENCODE_2608 | GSM379056 Krimp Heterozygote | SRR032093 ago1 knockdown | V063 CS,ovary,AGO1IP modENCODE_2744 | GSM379057 Krimp Mutant | SRR031696_2152 Ago1-associated small RNAs from Oregon R . | V076 ML-DmBG3-C2 modENCODE_2719 | V018 Kc167 cell modENCODE_2606 | SRR031692 Total small RNAs from Oregon R | V009 CMEL1 modENCODE_2820 | SRR014275 Ovary_rep1 LK_P | GSM379058 | V089 ago2[414] ovary total RNA modENCODE_2834 | GSM379064 Vasa Mutant | V008 S2-DRSC modENCODE_2722 | GSM280088 S2cell (AGO1IP) modENCODE_2380 | SRR031701 Total small RNAs from r2d2 heterozygous flies | SRR031699 Total small RNAs from dcr-2 homozygous flies | S1 male head modENCODE_747 | GSM379051 Armi Mutant | SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb | SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb | GSM379053 Aub Mutant | SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1 | V001 IR- modENCODE_2971 | V028 CMEW1 Cl.8+ cell modENCODE_2721 | V083 male, one day modENCODE_2008 | SRR023400 total RNA extracted from P19 cells | SRR001338 IR non-beta-eliminated | GSM379063 Vasa Heterozygote | SRR001345 ago2 non-beta-eliminated | SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb | V066 r2d2[1], ovary, AGO1IP modENCODE_2749 | GSM280083 dcr-2-/- ovaries (18-29nt) modENCODE_526 | GSM379059 | V002 IR+ modENCODE_2972 | V024 kc167 cell modENCODE_2606 | SRR001341 WT_males non-beta-eliminated | V084 female, one day modENCODE_2009 | SRR010951 Ago3 heterozygotes, oxidized SRX002202 | V021 ML-DmD21 cell modENCODE_2005 | V019 GM2 cell modENCODE_2004 | V088 r2d2[1] ovary total RNA modENCODE_2748 | SRR029031 loqs-ORF knockdown | GSM379066 Zuc Mutant | SRR001339 WT_females non-beta-eliminated | S32 s2+48 #2 modENCODE_2973 | GSM379065 Zuc Heterozygote | |
| .........................................................................AATTCTTTGACGTATTCGCTGG............................ | 22 | 1 | 177.00 | 14.00 | 13.00 | 12.00 | 11.00 | 11.00 | 9.00 | 8.00 | 5.00 | 5.00 | 5.00 | 5.00 | 5.00 | 0.00 | 4.00 | 3.00 | 4.00 | 0.00 | 4.00 | 4.00 | 3.00 | 3.00 | 3.00 | 2.00 | 2.00 | 3.00 | 2.00 | 2.00 | 2.00 | 2.00 | 1.00 | 1.00 | 2.00 | 0.00 | 1.00 | 1.00 | 0.00 | 1.00 | 1.00 | 1.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 |
| .........................................................................AATTCTTTGACGTATTCGCTG............................. | 21 | 1 | 13.00 | 2.00 | 0.00 | 0.00 | 0.00 | 0.00 | 2.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 5.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| .........................................................................AATTCTTTGACGTATTCG................................ | 18 | 1 | 4.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 4.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| ..............................AGCGAATACGCCTCGGATCCAATCA.................................................................... | 25 | 1 | 2.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| ..............................AGCGAATACGCCTCGGATCCA........................................................................ | 21 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| ..............................AGCGAATACGCCTCGGATCCAAT...................................................................... | 23 | 1 | 1.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| .........................................................................AATTCTTTGACGTATTCGCT.............................. | 20 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| .........................................................................AATTCTTTGACGTATTCGCTGGC........................... | 23 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| ..............................AGCGAATACGCCTCGGATCCAATC..................................................................... | 24 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| ..............................AGCGAATACGCCTCGGATCCAA....................................................................... | 22 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| Size | Blast | Total Norm | V098 dcr-2[L811fsX] ovary_modENCODE_2975 | V097 CS ovary_modENCODE_2976 | V064 ago2[414], ovary, AGO1IP_modENCODE_2746 | V067 S2-NP_modENCODE_2375 | SRR029028 untreated (mock) _ | V081 embryo 2-6hr_modENCODE_2742 | V065 dcr-2[L811fsX], ovary, AGO1IP_modENCODE_2833 | V033 CMEW1 Cl.8+ cell_modENCODE_2721 | SRR029030 dcr-2 knockdown _ | SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb _ | V090 CS male total RNA _modENCODE_2751 | V082 embryo 14-24hr_modENCODE_2743 | SRR014280 Ovary_rep1 w1118_P _ | V020 S2R+ cell_modENCODE_2608 | V025 S2R+ cell_modENCODE_2608 | GSM379056 Krimp Heterozygote _ | SRR032093 ago1 knockdown _ | V063 CS,ovary,AGO1IP_modENCODE_2744 | GSM379057 Krimp Mutant _ | SRR031696_2152 Ago1-associated small RNAs from Oregon R_. | V076 ML-DmBG3-C2_modENCODE_2719 | V018 Kc167 cell_modENCODE_2606 | SRR031692 Total small RNAs from Oregon R _ | V009 CMEL1_modENCODE_2820 | SRR014275 Ovary_rep1 LK_P _ | GSM379058 _ | V089 ago2[414] ovary total RNA _modENCODE_2834 | GSM379064 Vasa Mutant _ | V008 S2-DRSC_modENCODE_2722 | GSM280088 S2cell (AGO1IP) _modENCODE_2380 | SRR031701 Total small RNAs from r2d2 heterozygous flies _ | SRR031699 Total small RNAs from dcr-2 homozygous flies _ | S1 male head_modENCODE_747 | GSM379051 Armi Mutant _ | SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb _ | SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb _ | GSM379053 Aub Mutant _ | SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1 _ | V001 IR-_modENCODE_2971 | V028 CMEW1 Cl.8+ cell_modENCODE_2721 | V083 male, one day_modENCODE_2008 | SRR023400 total RNA extracted from P19 cells _ | SRR001338 IR non-beta-eliminated _ | GSM379063 Vasa Heterozygote _ | SRR001345 ago2 non-beta-eliminated _ | SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb _ | V066 r2d2[1], ovary, AGO1IP_modENCODE_2749 | GSM280083 dcr-2-/- ovaries (18-29nt) _modENCODE_526 | GSM379059 _ | V002 IR+_modENCODE_2972 | V024 kc167 cell_modENCODE_2606 | SRR001341 WT_males non-beta-eliminated _ | V084 female, one day_modENCODE_2009 | SRR010951 Ago3 heterozygotes, oxidized _SRX002202 | V021 ML-DmD21 cell_modENCODE_2005 | V019 GM2 cell_modENCODE_2004 | V088 r2d2[1] ovary total RNA _modENCODE_2748 | SRR029031 loqs-ORF knockdown _ | GSM379066 Zuc Mutant _ | SRR001339 WT_females non-beta-eliminated _ | S32 s2+48 #2_modENCODE_2973 | GSM379065 Zuc Heterozygote _ | |
| ..............................AGCGAATACGCCTCGGATCCAA....................................................................... | 22 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |