| Size | Blast | Total Norm | V097 CS ovary modENCODE_2976 | V098 dcr-2[L811fsX] ovary modENCODE_2975 | V063 CS,ovary,AGO1IP modENCODE_2744 | V089 ago2[414] ovary total RNA modENCODE_2834 | SRR014271 Embryo_0-2hrs rep1_w1118_0_2hr_Emb | V088 r2d2[1] ovary total RNA modENCODE_2748 | SRR031696_2152 Ago1-associated small RNAs from Oregon R . | V090 CS male total RNA modENCODE_2751 | SRR014275 Ovary_rep1 LK_P | V081 embryo 2-6hr modENCODE_2742 | SRR014268 Embryo_0-2hrs rep1_HAR_0_2hr_Emb | SRR014274 Ovary_rep1 LK(fem)_x_Har(male)_F1 | V083 male, one day modENCODE_2008 | V082 embryo 14-24hr modENCODE_2743 | SRR031692 Total small RNAs from Oregon R | V064 ago2[414], ovary, AGO1IP modENCODE_2746 | S22 female head #1 modENCODE_750 | GSM379060 SpnE Heterozygote | SRR029633 total small RNAs from hen1 homozygous flies | S9 0-1h #3 (7) modENCODE_755 | SRR014280 Ovary_rep1 w1118_P | S14 0-1hr #1 (A) modENCODE_745 | SRR014269 Embryo_0-2hrs rep1_LK_0_2hr_Emb | V084 female, one day modENCODE_2009 | V065 dcr-2[L811fsX], ovary, AGO1IP modENCODE_2833 | GSM379051 Armi Mutant | SRR014270 Embryo_0-2hrs rep1_NA_0_2hr_Emb | SRR031693_4 | GSM379058 | SRR014272 Embryo_0-2hrs rep1_wK_0_2hr_Emb | SRR001347 ago2 untreated | GSM379053 Aub Mutant | V001 IR- modENCODE_2971 | S24 male body #2 modENCODE_2554 | SRR014279 Ovary_rep1 w1118(fem)_x_wK(male)_F1 | S27 0-1d Pupae (w) modENCODE_2543 | SRR031701 Total small RNAs from r2d2 heterozygous flies | S28 0-2d pupae modENCODE_2556 | S25 1st instar #1 modENCODE_762 | V066 r2d2[1], ovary, AGO1IP modENCODE_2749 | S2 female head modENCODE_737 | V002 IR+ modENCODE_2972 | SRR031703 Total small RNAs from r2d2 homozygous flies | S12 6-10h #1 (10) modENCODE_754 | SRR014276 Ovary_rep1 NA(fem)_x_Har(male)_F1 | SRR001343 dcr-2 non-beta-eliminated | GSM379066 Zuc Mutant | |
| ............................TGAATTACATTGATCGTGACAT................................................... | 22 | 1 | 101.00 | 17.00 | 9.00 | 9.00 | 5.00 | 7.00 | 3.00 | 4.00 | 1.00 | 2.00 | 4.00 | 1.00 | 3.00 | 2.00 | 3.00 | 2.00 | 3.00 | 0.00 | 2.00 | 1.00 | 2.00 | 0.00 | 2.00 | 1.00 | 0.00 | 2.00 | 1.00 | 1.00 | 0.00 | 1.00 | 1.00 | 1.00 | 0.00 | 0.00 | 1.00 | 0.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 1.00 | 0.00 | 1.00 | 0.00 |
| ............................TGAATTACATTGATCGTGACA.................................................... | 21 | 1 | 23.00 | 4.00 | 2.00 | 1.00 | 1.00 | 0.00 | 1.00 | 0.00 | 3.00 | 2.00 | 0.00 | 2.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 2.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 1.00 | 1.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 |
| ................................................................TCGCCGAGCCATGTAAATCGTT............... | 22 | 1 | 5.00 | 3.00 | 1.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| TTGGGGGCGCTGCACTGGCAT................................................................................ | 21 | 1 | 3.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| TTGGGGGCGCTGCACTGGCATTGA............................................................................. | 24 | 1 | 2.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 |
| ............................TGAATTACATTGATCGTGACATGGGA............................................... | 26 | 1 | 2.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| TTGGGGGCGCTGCACTGGCATTG.............................................................................. | 23 | 1 | 2.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| TTGGGGGCGCTGCACTGGCATT............................................................................... | 22 | 1 | 2.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 2.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| ..............................................................TGTCGCCGAGCCATGTAAATCGT................ | 23 | 1 | 1.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| ....................................................................CGAGCCATGTAAATCGTTTGG............ | 21 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |
| ..................................ACATTGATCGTGACATGGGAA.............................................. | 21 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 1.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 | 0.00 |