| seed | -----------------------------------------------------------------------------------------CGAAUCG------------------------------------------------- | 27 | novel |
| | | | CE1 |
| | ----------------------------------------------------------------------------------------TCGAATCGTTTATCAGGATG------------------------------------- | 20 | 14 |
| cel-miR-59 | ----------------------------------------------------------------------------------------TCGAATCGTTTATCAGGATGATG---------------------------------- | 23 | 12 |
| | ----------------------------------------------------------------------------------------TCGAATCGTTTATCAGGATGAT----------------------------------- | 22 | 1 |
| celegans | --------------------AGTTGATCTAGATATGACATCGTCCTGAAAACGAAACGGAACAAA---AGTTCAAGATATTGAT---TTCGAATCGTTTATCAGGATGATGTGATTAAAATCAACT------------------- | |
| cbriggsae | -----CGTGTGTT------CGAATATTCGAATTTTGA----ATTCCAGAGGCGTGGTGGA----------------------------TCGAATCGGTAATCAACATATG----------------------------------- | |
| cjaponica | -------TAGGTT------CGGTTCATCCGATAATGAC---GTTCTGAAATCGACGCGAAATTGG--AATTGAAAATTTGAGAT---TTCGAATCGTTTATCAGGATGTCATCATTCATTGAGCCCCTG---------------- | |
| cbrenneri | -GATTCTTCTGTTATTTTTTTTTTGAATCAAATATGACAACGTCCTGAAAACGAAACGAAACTGATTCATTGTAAAG---AGAT---TTCGAATCGTTTATCAGGATGTTGCCATTGGATTCAAATGAAAAGGTGAGACTGATC- | |
| ppacificus | CGGTCATTACGGT------GGTCAGCGCCGAC--TTACTGCGTTTAGCAAACAAATAGCGCC-----CCTGTCAAAATTTCGACAGACTCGAATCGCTTGCTAA-ATACAGAAAGTTCGTGCGAGCCGCTCCCATCTTATGAGCG | |
| cremanei | --GTTATTCTGTT------CCCTTGATTCATAGATGACATCGTCCTGAAAACGAAGCGAAACTAA--CATCAGAAGATA-AGAT---TTCGAATCGTTTATCAGGATGATGTCATTATTGAAACATTCATTTTTGGTAAT----- | |
| | * * * * * * ******** * * ** | |
| celegans | (((((((......((.((((((((((((((((((..(((((.... ...((((....))))) ))))..)))))).)))))))))))).))....))))))) | 1.000 -35.71 |
| cbriggsae | (((((((( .((.((.((((..((((( ..((((.........)))) ))))))))))).)))))))))) | 0.972 -14.60 |
| cjaponica | ((((.. .((((((...(((.((((( (((((((...(((..(((((((.( (((.....))))..))) ))))..)))....)))))))))))).)))...)))))))))) | 0.999 -37.90 |
| cbrenneri | ((((..(((..(((((((((((((((((....(((.(((((((((((((((((..(((((((.............. )).) ))))..)))))).))))))))))).)))..)))))))).))))))))))))..)))) | 0.990 -44.24 |
| ppacificus | ((.((((...((( (((..((((.((( ((.(((..((((((((........((.. .(((((........)))))...))......))))))) )..))).))))).))))..))))))........)))).)) | 0.973 -43.94 |
| cremanei | ((((((..... ....((.((((..((((((((((((((((((((((..(((((((.. .(((....))). )).) ))))..)))))).))))))))))))))))..)))).)).........)))))) | 0.919 -42.27 |
| celegans | chromosome:IV:11309125:11309224:-1 | intergenic ## {SimpF: WRM0637aE10 -1 fosmid,WRM0640dE06 -1 fosmid,WRM0616dC03 -1 fosmid,WRM065bG03 -1 fosmid,WRM068cC11 -1 fosmid} ## {MIR: cel-mir-59} |
| cbriggsae | chromosome:chrV:600964:601103:1 | Opposite_strand|Intronic_coding|NM_001847 ## Same_strand|Intronic_coding|NM_001028815 ## Opposite_strand|Boundary_coding|NM_060528 |
| cjaponica | chromosome:chrUn:22230736:22230843:-1 | intergenic |
| cbrenneri | chromosome:chrUn:148292271:148292407:-1 | intergenic |
| ppacificus | chromosome:chrUn:108228994:108229124:1 | intergenic |
| cremanei | chromosome:chrUn:57015039:57015164:-1 | Opposite_strand|Intronic_coding|NM_069625 |