| seed | ----------------------------------------------------------------------------------------CACCGGG-------------------------------------------------- | 1 | miR-35/36/38/39/40/41 |
| | | | CE1 |
| cel-miR-38 | ---------------------------------------------------------------------------------------TCACCGGGAGAAAAACTGGAGT------------------------------------ | 22 | 1 |
| celegans | -------TCTGT--------------GAGCCAGGTCCTGTTCCGGTTTTT-TCCGTG-GTGATAACGCATCCAAAA----GTCTCTATCACCGGGAGAAAAACTGGAGTAGGACCTGTGACTCAT-------------------- | |
| cbriggsae | ------GTCCGATGGGTATTCATGTGGAGCCTGGACCTGTACCGGGTTCTCTTTGTG-GTGATATGACAACTCATAACCATTCCTTATCACCGGGAGACAACCTGGTATAGGTCCAGCGACTCTGCTGGATGGTCCCGTTGCCC- | |
| cjaponica | GCAGTGGTCCCTCGGGGCAGAA----GAGCCAGGACCTACATCAGTTTCTTTCCGCG-GTAATAAATAATACATTA--------TTATCACCGGGAGAAAAACTGGAGTAGGACCTGCGACTCGACTCGACCTTTATTCCGCTGT | |
| cbrenneri | -----GGTCTATTTCGTTTCCA----GAGCCAGGACCTGTTCCAGTTTTTTTCCGCG-GTAATAACGCGAGCAAGT-------CCTATCACCGGGAGAAAAACTGGAGTAGGTCCTGCGACTCTACAAGGATGTTCAGTAGTCT- | |
| ppacificus | ----------GTACCGTACCCA-------CCCCGTCCTGCATCGCGTATCGCCCGTGTGTGCTCGCATAAGAAGTA----------CTCACCGGGAGAAATGC-GATGTAGG-CCCGTGGCCTACCGTAC--------------- | |
| cremanei | --------------------------------------ATACCGGTTTAACTTCGTG-GTGATATGACACATATTA--CATTCTTTATCACCGGGAGTAAAACTGGTAT------------------------------------ | |
| | * * * * ** * ********** * * * * | |
| | ----- ----- ------------------------ ------ ------------------ --------------------------------------------- ----- | Y62F5A.9 Y62F5A.9 Y62F5A.9 |
| celegans | ...(( (((((((((((((((((((((((( ..(.(( ((((((..((........ ))...)))))))).)..)))))))))))))))))))).).))))) | 1.000 -50.10 |
| cbriggsae | ...(((((((((((((.((((((.((((((((((((((((((((((..((( (((((((((....)))))........)))))))..)))))..)))))))))))))))))...))))))))))))..)))))))... | 0.997 -66.80 |
| cjaponica | (((((((......((((..((. (((.((((.(((((..((((((.(((((.(( ((.((.(((((....))) )))).))))))))).))))))..))))).))))...)))...))..))))....))))))) | 0.964 -51.50 |
| cbrenneri | ((.(((((.....(((( (((.((((((((((((((((((((((((.(( ((.(((..((......)) ..))).))))))))))))))))))))))))))))...))))....))).....))))).)) | 0.997 -55.90 |
| ppacificus | ((((.(((.((( (.....((((((((((((.((.((((((.((((((......)).))) ).))).))).)).)))) )))))))) ...))))..))).)))) | 1.000 -46.70 |
| cremanei | ((((((((((.(((((.(( ((((((............ .......))))))))))))).)))))))))) | 1.000 -26.31 |
| celegans | chromosome:II:11537846:11537943:1 | Opposite_strand|Intronic_coding|Y62F5A.9|Y62F5A.9 ## Y62F5A.9|protein_coding|Y62F5A.9|Y62F5A.9 [Source:RefSeq_peptide;Acc:NP_741048] ## {MIR: cel-mir-38} |
| cbriggsae | chromosome:chrII:7535848:7535984:1 | Opposite_strand|Intronic_coding|NM_177732 ## Same_strand|Intronic_coding|NM_001101718 ## {MIR: cbr-mir-38} |
| cjaponica | chromosome:chrUn:117591702:117591833:-1 | Opposite_strand|Intronic_coding|NM_171042 |
| cbrenneri | chromosome:chrUn:41613392:41613518:-1 | Same_strand|Intronic_coding|NM_001056672 ## Opposite_strand|Intronic_coding|NM_171042 |
| ppacificus | chromosome:chrUn:118860534:118860634:1 | Same_strand|Intronic_coding|NM_133957 ## {Repeats: (CCCTA)n 5 80 1 class=Simple_repeat} |
| cremanei | chromosome:chrUn:8778778:8778845:-1 | Same_strand|Intronic_coding|NM_001011005 ## Opposite_strand|Intronic_coding|NM_171042 |