| seed | ----------------------------------UAAGUAG---------------------------------------------------------------------------------------------- | 1118 | miR-251 |
| seed | -----------------------------------AAGUAGU--------------------------------------------------------------------------------------------- | 16 | miR-252 |
| seed | --------------------------------------UAGUAGU------------------------------------------------------------------------------------------ | 7 | novel |
| | | | CE1 |
| | ---------------------------------ATAAGTAGTAGTGCCGCAGGT--------------------------------------------------------------------------------- | 21 | 1079 |
| | ---------------------------------ATAAGTAGTAGTGCCGCAGG---------------------------------------------------------------------------------- | 20 | 15 |
| cel-miR-252 | ---------------------------------ATAAGTAGTAGTGCCGCAGGTAA------------------------------------------------------------------------------- | 23 | 15 |
| | ----------------------------------TAAGTAGTAGTGCCGCAGGTA-------------------------------------------------------------------------------- | 21 | 8 |
| | ----------------------------------TAAGTAGTAGTGCCGCAGGT--------------------------------------------------------------------------------- | 20 | 8 |
| | -------------------------------------GTAGTAGTGCCGCAGGTAA------------------------------------------------------------------------------- | 19 | 7 |
| | ---------------------------------ATAAGTAGTAGTGCCGCAGGTA-------------------------------------------------------------------------------- | 22 | 5 |
| | ---------------------------------ATAAGTAGTAGTGCCGCA------------------------------------------------------------------------------------ | 18 | 3 |
| | ---------------------------------ATAAGTAGTAGTGCCGCAGGTAAC------------------------------------------------------------------------------ | 24 | 1 |
| celegans | -------------TCCAGGGGTCTCTTTCAGTTATAAGTAGTAGTGCCGCAGGTAACCGCCAGTCTAAA--AGGCTTACCTACTGCCTTCTGCTTAAAA--TTGAAATATTGATG-------------------- | |
| cbriggsae | -----------------GAGGTCTCTCCCAGTTATAAGTAGTAGTGCCGCAGGTAACCGCTTCCAGAAAATTGGTTTACCTACTGCCTTCTGCTTAGAA--TTGGGATTTTGATGACCGTC-------------- | |
| cjaponica | -------------------------TTCCGATTATAAGTAGTAGTGCCGCAGGTAACTG------GAGA--TTGATTACCTACTGCCTCCTGCTTAAAA--TTGGAA---------------------------- | |
| cbrenneri | CTTTCTATATTCCTTTTTTGGTCTCTTTCAGTTATAAGTAGTAGTGCCGCAGGTAACCG---ATTTCAA--TGGTTTACCTACTGCCTCCTGCTTAGAA--TTGAAATTTCGATGACCGTCTTTTGTAATGAAAG | |
| ppacificus | --------GATCACCTATCACTCTGTCCGGGTTCTAAGTAGTAGTGCCGCAGGTAACCAACAATTGAGA---GGTTTACCTATAGCCTTCTGCTTAACACCTTGAAGAGTTGATC-------------------- | |
| cremanei | -------------------GGTCTCTTTCAGTTATAAGTAGTAGTGCCGCAGGTAACCACTCAAATATA--TGGTTTACCTACTGCCTTCTGCTTAGAA--TTGAAATATCGATGACC----------------- | |
| | * ** *********************** * * ******* **** ******* * *** | |
| | ----- -------------------------------------------------------- ---------------------------- -------------- ----- | W02B12.13 W02B12.13 W02B12.13 |
| celegans | .......(((..((((((((.(((((((.((.((.(.((((((..(((........ .))))))))).).)))).))))))).)) ))))))....))). | 1.000 -29.50 |
| cbriggsae | ..((((((((((((((.(((((((.((.((...(((((((((.((......)).))))).))))...)))).))))))).)) ))))))....)).))))... | 1.000 -36.70 |
| cjaponica | .(((((((.(((((((.((.((...((((((... .... ....))))))...)))).))))))).)) ))))). | 0.999 -23.60 |
| cbrenneri | (((((..(((........(((((((((((((((.(((((((.((.((...((((((((( ....... ))))).))))...)))).))))))).)) ))))))....)).)))))......)))..))))) | 0.971 -34.24 |
| ppacificus | (((((......(((((.((.((((..(((((((.((.((...((((((((........... )))).))))...)))).)))))))..)))).)))))))))))) | 0.999 -32.30 |
| cremanei | ((((((((((((((.(((((((.((.((...(((((((((.......... ))))).))))...)))).))))))).)) ))))))....)).)))) | 1.000 -30.30 |
| celegans | chromosome:II:11446779:11446876:-1 | Opposite_strand|Intronic_coding|W02B12.13|W02B12.13 ## W02B12.13|protein_coding|W02B12.13|Putative uncharacterized protein. [Source:UniProtKB/TrEMBL;Acc:A3FPK4] ## {MIR: cel-mir-252} |
| cbriggsae | chromosome:chrII:7467787:7467888:-1 | Same_strand|Intronic_coding|NM_001031311 ## Opposite_strand|Intronic_coding|NM_001129175 ## {MIR: cbr-mir-252} |
| cjaponica | chromosome:chrUn:63338611:63338682:-1 | Opposite_strand|Intronic_coding|NM_001129175 |
| cbrenneri | chromosome:chrUn:41707048:41707175:1 | Opposite_strand|Intronic_coding|NM_001056672 ## Opposite_strand|Boundary_coding|NM_001129175 |
| ppacificus | chromosome:chrUn:24531069:24531172:1 | Same_strand|Intronic_coding|NM_001114660 ## Opposite_strand|Intronic_coding|NM_174405 |
| cremanei | chromosome:chrUn:8843504:8843598:1 | Opposite_strand|Intronic_coding|NM_001011005 ## Same_strand|Intronic_coding|NM_077846 |