| seed | ------------------------GAGGUAG---------------------------------------------------------------------------------- | 15 | miR-241/48/let-7/84 |
| | | | CE1 |
| cel-miR-795 | -----------------------TGAGGTAGAT-----TGATCAGCGAGCTT------------------------------------------------------------- | 24 | 13 |
| | -----------------------TGAGGTAGAT-----TGATCAGCG------------------------------------------------------------------ | 19 | 1 |
| | -----------------------TGAGGTAGAT-----TGATCAGCGAGCT-------------------------------------------------------------- | 23 | 1 |
| celegans | ---------GAAACGTTACCTGCTGAGGTAGAT-----TGATCAGCGAGCTTGATACCCCGTTCAAAATCGTGATCAGTATACTTCGTCAGGCAGCTTGTTTT---------- | |
| cremanei | -----------------------TGAGGTAGACAC--AGTGGCTACGAATCTA-----CCAACCAGGGTTCGAGTCCACATACCTCA-------------------------- | |
| cbriggsae | -----------------------CGAGGTAGAT-----TGAGAATTGAGATTG--------------ATTGAAATCAACTCGGCTCACTTTCAGTATCCTG------------ | |
| cjaponica | GTGTGATTGGGGCGCGTTTGCACTGAGGTAGGTGCCAGCATGCCGTGATACTTCCATTTCAACATATTTCTGCTCCACCACGTCTCAGTTTTCACGCGTTTCCATTTTCAAAC | |
| ppacificus | -----------------------CGAGGTAGAAATGCATTCG-TATGAGTTTGAGTGGATGATCGAAATC-AAGTGACCGTTTCTAACTGCG--------------------- | |
| | ******* ** * * * | |
| celegans | ((((((((.((((.(((((((.(( ((((((.(((..((((........))))..))))))))))).))))))).)))).)))..))))) | 1.000 -33.50 |
| cremanei | .((((((..... .((((((.(((((((. .......))))))))).)))).)))))). | 1.000 -22.20 |
| cbriggsae | ..(((...(( (((((..((((.((( ((((....))).)))))))).)))))))..))). | 1.000 -15.90 |
| cjaponica | ...(((.((((((((((....(((((((..((((..((((.....(((..........))).........)))).))))...)))))))....))))))).)))...)))... | 0.996 -30.34 |
| ppacificus | ((((.((((((((...((( ..(((.(((((........))))).)) )..))).)))))))).)).)) | 0.960 -15.80 |