| seed | ----------------------------------------------UGAGCAA------------------------------------------------------------------------------- | 0 | miR-233/356/87 |
| | | |
| cel-miR-356 | ---------------------------------------------TTGAGCAAC-GCGAACAAATC-A---------------------------------------------------------------- | 21 |
| celegans | --------------------TAAAGTTTCCTTGAGAACAATGTGGTTGAGCAAC-GCGAACAAATC-ATCAATGTAAATTTCAGCGGATTCGTTACGACGTGTCTCACCACATCGTTAGTAGGATTTCAGAA | |
| cbriggsae | ---------------------------------------------ATGAGCAAC-GCGAACAAATCCTCTTAT---AA------GAGATTTGCCACGCCGCCGCTCAC------------------------ | |
| cbrenneri | ---------------------------------------------TTGAGCAATAGTAGAAATGACCAACAA----AATTTACCCAAATCT----TGTTGTTTTCCAC--------------AATTTCTCAG | |
| cjaponica | ---------------------------------------------ATGAGCAAT-GCGAACAAATCAATCGAT---AATTCAGATGGATTTGTTGCCACGTGGCTCAC------------------------ | |
| ppacificus | ---------------------------------------------TTGAGCAACAGCGTAAGAGAC-ATCGATGGAAA----CGTAGATTACCTTTAATTGTGTTCAT------------------------ | |
| cremanei | TAGAGGAAAAGAAATAAAATTAAACCGCTTTTGCCATCGATGTGGTTGAGCAAC-GCGAACAAATC-ATCGA----AAATGACTGAGATTTGCGCCAACGTGGCTCACCACATCG-------AATTGGAGCG | |
| | ******* * * * * ** ** ** | |
| celegans | .......((((....(((.(((((((.(((..(( ((((((.(((( .....((.......))...)))).))).)).)))..)))))))))).)))...))))........ | 1.000 -29.20 |
| cbriggsae | .(((((... (((..(((((.((((... .) ))))))))...)))....))))). | 1.000 -16.00 |
| cbrenneri | .((((.(((.((.((((....(((((( .((((....)))).) ))))).)))).)) .))).)))). | 1.000 -13.00 |
| cjaponica | .(((((... ((.((((((((.(((((. ...)).))).))))))))))......))))). | 1.000 -18.60 |
| ppacificus | .(((((.((((...(((.... (((.(((.... ))).)))...)))...))))))))). | 0.995 -13.00 |
| cremanei | .........................((((((.....(((((((((.(((((.(( (((..(((((( .(((. .......))))))))))))....)).))))))))))))) )...)))))) | 0.960 -37.30 |
| celegans | chromosome:III:7860073:7860182:1 | intergenic ## {SimpF: WRM0615aC07 1 fosmid,ZK652.2 1 Expression_profile,WRM061cC03 1 fosmid,WRM065dF11 1 fosmid,WRM068bA12 1 fosmid,WRM0635aH10 1 fosmid} ## {MIR: cel-mir-356} |
| cbriggsae | chromosome:chrIII:10353527:10353676:-1 | Same_strand|Intronic_coding|NM_000209 ## Opposite_strand|Intronic_coding|NM_170975 ## {MIR: cbr-mir-356} |
| cbrenneri | chromosome:chrUn:167667831:167667980:1 | intergenic |
| cjaponica | chromosome:chrUn:31081396:31081545:1 | intergenic |
| ppacificus | chromosome:chrUn:165565819:165565968:1 | intergenic |
| cremanei | chromosome:chrUn:133239914:133240032:-1 | Opposite_strand|Intronic_coding|NM_001002694 |