| seed | ---------------------------------------------------------------------------AAAUGCC------------------------------------- | 9 | miR-357 |
| seed | ----------------------------------------------------------------------------AAUGCCA------------------------------------ | 6 | novel |
| seed | ------------------------------------------------------------------------------UGCCAGU---------------------------------- | 1 | novel |
| | | | CE1 |
| cel-miR-357 | --------------------------------------------------------------------------TAAATGCCAGTCGTTGCAGGAGT---------------------- | 23 | 9 |
| | ---------------------------------------------------------------------------AAATGCCAGTCGTTGCAGGAGT---------------------- | 22 | 5 |
| | ---------------------------------------------------------------------------AAATGCCAGTCGTTGCAGG------------------------- | 19 | 1 |
| | -----------------------------------------------------------------------------ATGCCAGTCGTTGCAGGAGT---------------------- | 20 | 1 |
| celegans | ----ACGCTGTACTACTCACCAGCGGATCCCTACAA-CGCTGCGCATATGCATGAAC-----ACAATGAAAATGTAAATGCCAGTCGTTGCAGGAGTTCGCATACAGTAGTAAAATGCG | |
| cbriggsae | AGAGA---------------CAGCGAATCCCGGCAATCACCGTGCATTTTCAT---CTACCAGAGGCACTAATGAAAATGCCAGTCATTGACGGAATTCGTTGAATCT----------- | |
| cjaponica | GAAAACGAGAAATT------TGGCGAATTGTTGTAACTTTTGTGCATCTGCTTGGAAAATTTTAAGTGA----GCAAATGCCAATTGTTGCAAAAATTCGCTGAA-------------- | |
| cbrenneri | ----------------------GCGAATCCCTGTAA-TACTGTGCATATACATGTCATACA------ACTAATGTAAATGCCAGTCGTTGCAGGAATTCGCTAAAAGTCAGCT------ | |
| ppacificus | --------------------------AGCATTGTAGATATGAGGTATCCTTGCAACATTTC------GATAACAAAAATGCCTATATTTTCAGGACT---------------------- | |
| cremanei | -TCAACGATGTGCTGCCTAACAGCGGATTCCAGTAA-CTCTGAGCATATACATGAAGTTTCAA----AACAATGTAAATGCCAGTCGTTGCTGGAATTCGATAAGCACTCGTGA----- | |
| | * * * ** ******* * ** * * | |
| | ----- -------------------------------- -------------------- -------------------------------------------------------------- | F25G6.2 F25G6.2 F25G6.2 |
| celegans | .(((..(((((((.....(((((..(((.((( (((((.((((.(((((.... .........))))).))))))).))))).)))..)))))....)))))))....))) | 1.000 -42.62 |
| cbriggsae | (((.. ((((((((.(((.((((.((...(((((((((( ...((...)).....))))))))))..)).)))).))).))))))))..))) | 1.000 -30.10 |
| cjaponica | ............(( ..(((((((.(((((((..(((.((((.(((((..............)) ))).)))))))..))))))).)))))))..)) | 0.994 -33.24 |
| cbrenneri | ((((((.((((((( (((((.((((.(((((........ ....))))).)))))))).)))))))).))))))............ | 0.919 -33.00 |
| ppacificus | ((..(((.((((((.((((((..(((......... .....)))..)))))))))))).)))..)) | 0.994 -10.54 |
| cremanei | ...((((.(((((.........((((((((((((( (.(((.((((.(((((...(((.... ))).))))).)))))))..))))))))))))))...))))))))).. | 0.948 -44.20 |
| celegans | chromosome:V:8580520:8580628:-1 | Opposite_strand|Intronic_coding|F25G6.2|F25G6.2 ## F25G6.2|protein_coding|F25G6.2|F25G6.2 [Source:RefSeq_peptide;Acc:NP_505210] ## {SimpF: CEOP5204 -1 Operon,WRM0626aA01 -1 fosmid,WRM0619bH10 -1 fosmid} ## {MIR: cel-mir-357} |
| cbriggsae | chromosome:chrV:1213917:1214006:-1 | Opposite_strand|Intronic_coding|NM_001106714 ## Same_strand|Intronic_coding|NM_001028857 ## {MIR: cbr-mir-357-1} |
| cjaponica | chromosome:chrUn:73154317:73154411:1 | Opposite_strand|Intronic_coding|NM_165217 |
| cbrenneri | chromosome:chrUn:96165556:96165639:1 | Opposite_strand|Intronic_coding|NM_125384 |
| ppacificus | chromosome:chrUn:14492983:14493131:-1 | Same_strand|Intronic_coding|NM_001045869 ## Same_strand|Boundary_coding|NM_063816 |
| cremanei | chromosome:chrUn:25671347:25671454:-1 | Opposite_strand|Intronic_coding|NM_199607 |