| Reference organism: celegans | Assembly: ce4 | |
| Ensembl database: caenorhabditis_elegans_core_52_190 | UCSC database: ce6 | Mirbase version: 12.0 |
| Min read length: 18 | Max read length: 30 | Min mapped read length: 18 |
| READ trimming: THREE_PRIME_A_MISMATCH_AND_ALL_TRIM | Editing analysis: 0 | |
| Distance from stem base: 5 | Distance from loop: 0 | Max distance between mature and star: 50 |
| Min mature length: 20 | Max mature length: 24 | Relative read abundance for signature calculation:0.3 |
| Max mature GC: 0.9 | Min Dicer/Drosha overhang: 1 | Max Dicer/Drosha overhang: 3 |
| Min required reads for novel confident miRNA: 5 | Min required libs for novel confident miRNA: 1 | Lib/read overlap for confident novel miRNAs: AND |
| Randfold threshold for confident novel miRNAs: 0.01 | Species for conservation analysis: cbrenneri cbriggsae cremanei cjaponica ppacificus | RNA forester threshold for homology: 0.3 |
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