miR-Intess: block5060

block5060_cand

Hairpin parameters
miRNA	randfold	RNA	rep	GC min/max	len min/max/mir_range	5'var	3'var	reads	reads edited	libs	libs edited	base distance	loop distance	position	locations	exon distance	unpaired	max bulge	total reads	total libs	dicer	drosha
no	0.001	no	no	0.43/0.43	21/21/1.00	0.0	0.0	3	0	1	0	17	3	3arm	1	nd	0.14	2	3	1	na	na

		reads	miRBase family seed
seed	--------------------------------------------------------AAGCAGC------------------------------	3	novel
		len	cloning frequencies
			AF16
	-------------------------------------------------------TAAGCAGCAGAAAATGGTGTG-----------------	21	3
cbriggsae	TGTTGTGGCTTTATCACACCATTTTGCAGCTTCTAAACACTCAAC-ATGCATTGTTAAGCAGCAGAAAATGGTGTGAAGAGGTTGTACAACAA
celegans	---------------------TTTCACATTTGTTGGAAAAGGAATGATTTAAT-TTAAGCAGCAG-AAATG--GTGAAG--------------
	* * * * * * * ********* * ****
	-------------------------------------------------- ----------------------------------------------------	NM_011978
cbriggsae	((((((((((((.((((((((((((((.((((..........((( (.....)))))))).)))))..))))))))).)))))..))))))).	1.000 -33.00
celegans	.(((((.(((((((......((((......)) ))...)))))) ).... ))))).	0.876 -10.20

cbriggsae	chromosome:chrX:14669142:14669233:1	Opposite_strand\|Intronic_non-coding\|NM_011978\|Slc27a2 ## {Repeats: no}
celegans	chromosome:chrV:9453490:9453621:-1	Opposite_strand\|Intronic_coding\|H24G06.1a