| 1. | cbr-let-7 | 67 | 1 | 1 | | miR-241/48/let-7/84 | 5' | | miRNAknown_cloningHIGH_randfoldOK |
| 2. | cbr-lin-4 | 1616 | 1 | 1 | | lin-4 | 5' | | miRNAknown_cloningHIGH_randfoldOK |
| 3. | cbr-lsy-6 | 0 | 0 | 1 | | | 3' | | miRNAknown_shortStem_randfoldOK |
| 4. | cbr-mir-1 | 69 | 1 | 1 | | | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 5. | cbr-mir-34 | 830 | 1 | 1 | | miR-34 | 5' | 3' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 6. | cbr-mir-35 | 827 | 1 | 1 | cluster 3 | miR-35/36/38/39/40/41 | 3' | | miRNAknown_cloningHIGH_randfoldOK |
| 7. | cel-mir-35 | 17 | 1 | 2 | cluster 13 | miR-35/36/38/39/40/41 | 3' | | miRBaseHomolog_cloningOK_randfoldOK |
| 8. | cbr-mir-36 | 421 | 1 | 1 | cluster 3 | miR-35/36/38/39/40/41 | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 9. | cel-mir-36 | 17 | 1 | 2 | cluster 14 | miR-35/36/38/39/40/41 | 3' | | miRBaseHomolog_cloningOK_randfoldOK |
| 10. | cbr-mir-38 | 91 | 1 | 1 | cluster 3 | miR-35/36/38/39/40/41 | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerNOK_randfoldOK |
| 11. | cbr-mir-39 | 17 | 1 | 1 | cluster 3 | miR-35/36/38/39/40/41 | 3' | | miRNAknown_cloningOK_randfoldOK |
| 12. | cbr-mir-40 | 316 | 1 | 1 | cluster 3 | miR-35/36/38/39/40/41 | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 13. | cbr-mir-41 | 1 | 1 | 1 | cluster 3 | miR-35/36/38/39/40/41 | 3' | | miRNAknown_randfoldOK |
| 14. | cbr-mir-42 | 324 | 1 | 1 | cluster 2 | miR-42 | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerNOK_randfoldOK |
| 15. | cbr-mir-43 | 46 | 1 | 1 | cluster 2 | miR-43 | 3' | | miRNAknown_cloningHIGH_randfoldOK |
| 16. | cbr-mir-44 | 193 | 1 | 2 | cluster 2 | miR-44/45/61 | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 17. | cbr-mir-45 | 193 | 1 | 2 | | miR-44/45/61 | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 18. | cbr-mir-46 | 202 | 1 | 1 | | miR-46/47 | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 19. | cbr-mir-47 | 90 | 1 | 1 | | miR-46/47 | 3' | | miRNAknown_cloningHIGH_randfoldOK |
| 20. | cbr-mir-48 | 45 | 1 | 1 | | miR-241/48/let-7/84 | 5' | 3' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 21. | cbr-mir-49 | 16 | 1 | 1 | | miR-49/83 | 3' | 5' | miRNAknown_cloningOK_multiarm_DicerOK_randfoldOK |
| 22. | cbr-mir-50 | 223 | 1 | 1 | | miR-50/62/90 | 5' | | miRNAknown_cloningHIGH_randfoldOK |
| 23. | cbr-mir-51 | 654 | 1 | 1 | | miR-51/52/55 | 5' | 3' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 24. | cbr-mir-52 | 1424 | 1 | 1 | | miR-51/52/55 | 5' | 3' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 25. | cel-mir-54 | 10 | 1 | 1 | cluster 10 | miR-51/52/55 | 5' | 3' | miRBaseHomolog_cloningOK_multiarm_DicerOK_randfoldOK |
| 26. | cbr-mir-55 | 795 | 1 | 1 | cluster 10 | miR-51/52/55 | 3' | | miRNAknown_cloningHIGH_randfoldOK |
| 27. | cel-mir-56 | 65 | 1 | 1 | cluster 10 | miR-51/52/55 | 3' | 5' | miRBaseHomolog_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 28. | cbr-mir-57 | 38 | 1 | 1 | | | 5' | 3' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 29. | cbr-mir-58 | 481 | 1 | 1 | | | 3' | 5' | miRNAknown_lenNOK_cloningHIGH_multiarm_DicerNOK_randfoldOK |
| 30. | cbr-mir-60 | 3175 | 1 | 1 | | | 3' | | miRNAknown_cloningHIGH_randfoldOK |
| 31. | cbr-mir-61 | 82 | 1 | 1 | cluster 8 | miR-44/45/61 | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 32. | cbr-mir-62 | 14 | 1 | 1 | | miR-50/62/90 | 3' | | miRNAknown_cloningOK_shortStem_mirtron_randfoldOK |
| 33. | cbr-mir-64 | 234 | 1 | 1 | cluster 4 | miR-64 | 5' | 3' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK_nonpairedHIGH |
| 34. | cel-mir-65 | 467 | 1 | 1 | cluster 4 | miR-64 | 5' | 3' | miRBaseHomolog_cloningHIGH_multiarm_DicerOK_randfoldOK_bulgeHIGH |
| 35. | cbr-mir-67 | 18 | 1 | 1 | | | 3' | | miRNAknown_cloningOK_randfoldOK |
| 36. | cbr-mir-70 | 35 | 1 | 1 | | | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 37. | cbr-mir-71 | 957 | 1 | 1 | | | 5' | 3' | miRNAknown_lenNOK_cloningHIGH_multiarm_DicerNOK_randfoldOK |
| 38. | cbr-mir-72 | 2 | 1 | 1 | | | 5' | 3' | miRNAknown_multiarm_DicerNOK_randfoldOK |
| 39. | cbr-mir-73 | 129 | 1 | 1 | cluster 9 | miR-73/74 | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerNOK_randfoldOK |
| 40. | cel-mir-73 | 104 | 1 | 1 | | miR-73/74 | 3' | | miRBaseHomolog_cloningHIGH_randfoldOK |
| 41. | cbr-mir-74 | 338 | 1 | 1 | cluster 9 | miR-73/74 | 3' | | miRNAknown_cloningHIGH_randfoldOK |
| 42. | cbr-mir-75 | 8 | 1 | 1 | | miR-75/79 | 3' | 5' | miRNAknown_cloningOK_multiarm_DicerOK_randfoldOK |
| 43. | cel-mir-76 | 14 | 1 | 1 | | | 3' | | miRBaseHomolog_cloningOK_randfoldOK |
| 44. | cbr-mir-77 | 4594 | 1 | 2 | | miR-77 | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerNOK_randfoldOK |
| 45. | cbr-mir-79 | 725 | 1 | 1 | | miR-75/79 | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 46. | cbr-mir-80 | 1986 | 1 | 1 | | miR-80/81/82 | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerNOK_randfoldOK |
| 47. | cbr-mir-81 | 3067 | 1 | 1 | | miR-80/81/82 | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 48. | cbr-mir-82 | 343 | 1 | 1 | | miR-80/81/82 | 3' | | miRNAknown_cloningHIGH_multiarm_randfoldOK |
| 49. | cel-mir-82 | 1 | 1 | 1 | | miR-80/81/82 | 3' | | miRBaseHomolog_randfoldOK |
| 50. | cbr-mir-83 | 10 | 1 | 1 | | miR-49/83 | 3' | 5' | miRNAknown_cloningOK_multiarm_DicerOK_randfoldOK |
| 51. | cbr-mir-84 | 5 | 1 | 1 | | miR-241/48/let-7/84 | 5' | | miRNAknown_cloningOK_shortStem |
| 52. | cbr-mir-85 | 17 | 1 | 1 | | | 3' | 5' | miRNAknown_cloningOK_multiarm_DicerOK_randfoldOK |
| 53. | cbr-mir-86 | 1343 | 1 | 1 | | | 5' | 3' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 54. | cbr-mir-87 | 116 | 1 | 1 | | miR-233/356/87 | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 55. | cbr-mir-90 | 377 | 1 | 1 | | miR-50/62/90 | 3' | | miRNAknown_cloningHIGH_randfoldOK |
| 56. | cel-mir-90 | 35 | 1 | 1 | | miR-50/62/90 | 3' | 5' | miRBaseHomolog_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 57. | cbr-mir-124 | 39 | 1 | 1 | | | 3' | | miRNAknown_cloningHIGH_randfoldOK |
| 58. | cbr-mir-228 | 77 | 1 | 1 | | | 5' | | miRNAknown_cloningHIGH_randfoldOK |
| 59. | cbr-mir-230 | 10 | 1 | 1 | | | 3' | 5' | miRNAknown_cloningOK_multiarm_DicerNOK_randfoldOK |
| 60. | cbr-mir-231 | 90 | 1 | 1 | | miR-231/787 | 3' | | miRNAknown_cloningHIGH_randfoldOK |
| 61. | cbr-mir-232 | 15 | 1 | 2 | | miR-232 | 3' | | miRNAknown_cloningOK_randfoldOK_nonpairedHIGH_bulgeHIGH |
| 62. | cbr-mir-233 | 16 | 1 | 1 | | miR-233/356/87 | 3' | | miRNAknown_cloningOK_randfoldOK |
| 63. | cbr-mir-234 | 1 | 1 | 1 | | | 3' | | miRNAknown_randfoldOK |
| 64. | cbr-mir-235 | 83 | 1 | 1 | cluster 1 | miR-235 | 3' | | miRNAknown_cloningHIGH_randfoldOK |
| 65. | cel-mir-235 | 647 | 1 | 1 | cluster 1 | miR-235 | 3' | 5' | miRBaseHomolog_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 66. | cbr-mir-236 | 225 | 1 | 1 | | | 3' | | miRNAknown_cloningHIGH_randfoldOK |
| 67. | cel-mir-237 | 41 | 1 | 1 | | lin-4 | 5' | 3' | miRBaseHomolog_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 68. | cel-mir-238 | 627 | 1 | 1 | | miR-239a | 3' | | miRBaseHomolog_cloningHIGH_randfoldOK |
| 69. | cbr-mir-239a | 64 | 1 | 1 | | miR-239a | 5' | 3' | miRNAknown_cloningHIGH_multiarm_DicerNOK_randfoldOK_bulgeHIGH |
| 70. | cbr-mir-239b | 2 | 1 | 1 | | | 5' | | miRNAknown_randfoldOK |
| 71. | cbr-mir-240 | 26 | 1 | 1 | cluster 11 | | 3' | | miRNAknown_cloningHIGH_randfoldOK |
| 72. | cbr-mir-241 | 8 | 1 | 1 | | miR-241/48/let-7/84 | 5' | 3' | miRNAknown_cloningOK_multiarm_DicerNOK_randfoldOK |
| 73. | cbr-mir-242 | 71 | 1 | 1 | | | 5' | | miRNAknown_cloningHIGH_loopOverlap_nonpairedHIGH |
| 74. | cbr-mir-244 | 15 | 1 | 1 | | | 5' | 3' | miRNAknown_cloningOK_multiarm_DicerOK_randfoldOK |
| 75. | cbr-mir-245 | 3 | 1 | 1 | | | 3' | | miRNAknown_randfoldOK |
| 76. | cbr-mir-246 | 12 | 1 | 1 | | | 3' | 5' | miRNAknown_cloningOK_multiarm_DicerOK_randfoldOK |
| 77. | cbr-mir-248 | 1 | 1 | 1 | | | 3' | | miRNAknown_randfoldOK |
| 78. | cbr-mir-249 | 2 | 1 | 1 | | | 3' | | miRNAknown_randfoldOK |
| 79. | cbr-mir-250 | 213 | 1 | 1 | cluster 8 | | 3' | 5' | miRNAknown_cloningHIGH_multiarm_DicerOK_randfoldOK |
| 80. | cbr-mir-251 | 4 | 1 | 1 | | | 5' | | miRNAknown_randfoldOK |
| 81. | cbr-mir-252 | 73 | 1 | 1 | | | 5' | | miRNAknown_cloningHIGH_randfoldOK |
| 82. | cbr-mir-253 | 7 | 1 | 1 | | | 5' | 3' | miRNAknown_cloningOK_multiarm_DicerOK_randfoldOK |
| 83. | cbr-mir-254 | 1 | 1 | 1 | | | 3' | 5' | miRNAknown_multiarm_DicerOK_randfoldOK |
| 84. | cbr-mir-255 | 1 | 1 | 1 | | | 3' | | miRNAknown_randfoldOK |
| 85. | cbr-mir-259 | 1 | 1 | 1 | | | 5' | | miRNAknown_randfoldOK |
| 86. | cbr-mir-268 | 0 | 0 | 1 | | | 5' | | miRNAknown_lenNOK_randfoldOK_bulgeHIGH |
| 87. | cbr-mir-353 | 0 | 0 | 1 | | | 5' | | miRNAknown_randfoldOK |
| 88. | cbr-mir-354 | 0 | 0 | 1 | | | 3' | | miRNAknown |
| 89. | cbr-mir-355 | 11 | 1 | 1 | | | 5' | | miRNAknown_cloningOK_randfoldOK |
| 90. | cbr-mir-356 | 0 | 0 | 1 | | | 5' | | miRNAknown_randfoldOK |
| 91. | cbr-mir-357 | 4 | 1 | 2 | | miR-357 | 3' | | miRNAknown_rep_randfoldOK |
| 92. | cbr-mir-358 | 0 | 0 | 1 | | | 3' | | miRNAknown_randfoldOK |
| 93. | cbr-mir-359 | 1 | 1 | 1 | | | 3' | | miRNAknown_randfoldOK |
| 94. | cbr-mir-360 | 1 | 1 | 1 | | | 3' | 5' | miRNAknown_multiarm_DicerNOK_randfoldOK |
| 95. | cbr-mir-392 | 0 | 0 | 1 | | | 3' | | miRNAknown_randfoldOK |
| 96. | cbr-mir-784 | 2 | 1 | 1 | | | 5' | | miRNAknown_randfoldOK |
| 97. | cbr-mir-785 | 0 | 0 | 1 | | | 3' | | miRNAknown_randfoldOK |
| 98. | cbr-mir-786 | 21 | 1 | 1 | cluster 11 | | 3' | | miRNAknown_cloningOK_randfoldOK |
| 99. | cbr-mir-787 | 1 | 1 | 1 | | miR-231/787 | 3' | | miRNAknown_randfoldOK |
| 100. | cbr-mir-788 | 3 | 1 | 1 | | miR-788 | 5' | | miRNAknown_randfoldOK |
| 101. | cbr-mir-789a | 2 | 1 | 2 | | | 3' | | miRNAknown_rep |
| 102. | cbr-mir-789b | 0 | 0 | 1 | | | 3' | | miRNAknown_randfoldOK |
| 103. | cbr-mir-790 | 6 | 1 | 2 | cluster 5 | miR-790/791 | 5' | | miRNAknown_cloningOK_randfoldOK |
| 104. | cbr-mir-791 | 0 | 0 | 1 | | | 3' | | miRNAknown_randfoldOK_bulgeHIGH |
| 105. | cbr-mir-792 | 0 | 0 | 1 | | | 3' | | miRNAknown |
| 106. | cel-mir-1822 | 3 | 1 | 1 | | | 3' | | miRBaseHomolog_randfoldOK |
C.briggsae small RNAs
©2008 InteRNA Genomics B.V.