cel-mir-237
| absolute | AF16 |
| cel-mir-237 5arm | 40 |
| cel-mir-237 3arm | 1 |
| normalized | AF16 |
| cel-mir-237 5arm | 0.104 |
| cel-mir-237 3arm | 0.003 |
sblock89 (miRBaseHomolog cel-mir-237) [miRBaseHomolog_cloningHIGH_multiarm_DicerOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBaseHomolog cel-mir-237 | 0.001 | no | no | 0.52/0.60 | 20/23/1.00 | 0.0 0.0 | 0.0 0.0 | 40 1 | 0 0 | 1 1 | 0 0 | 22 32 | 3 5 | 5arm 3arm | 1 1 | nd nd | 0.26 0.15 | 3 3 | 41 | 1 | 2 | 0 |
| Member of family lin-4 (seed CCCUGAG): cel-mir-237, cbr-lin-4, sblock71_cand |
| reads | miRBase family seed | ||
| seed | --------------------------------------CCCUGAG--------------------------------------------------------------------------------------------- | 40 | lin-4 |
| seed | -----------------------------------------------------------------------------UGUCGAG------------------------------------------------------ | 1 | novel |
| len | cloning frequencies | ||
| AF16 | |||
| -------------------------------------TCCCTGAGAATGCTCCGACATC-T----------------------------------------------------------------------------- | 23 | 40 | |
| ----------------------------------------------------------------------------CTGTCGAGCACCATTGGGGA------------------------------------------ | 20 | 1 | |
| cbriggsae | ---------------TCTTGAAAACCATGTTTGGTGGTCCCTGAGAATGCTCCGACATC-TTCGAAGTA-GCGTAGCTGTCGAGCACCATTGGGGACCAGCGGA----------TTTTTGGTTATAATTTTTTTCAAG | ||
| cremanei | ACTTCTCTCAGTATTCCCCAGTTACCGTCTTTGGTGGTCCCTGAGAATGCTCTGACTGCTTTCGAAGTACACGCAGCAGTCGAGTATCCTTAGGAACCAGTAAATTACGGTTCTTTTTTGAATACCATATAGATTGGT | ||
| celegans | -----TTCAAGCTGTTCAAAACTTCTACATTGCGTGGTCCCTGAGAATTCTCGAACAGC-TTCAAAGTGTTCA-AGCTGTCGAGTTTTGTCAAGGACCAAACAA------------------TAGAAGATCACTTGGG | ||
| cbrenneri | -------------------------------------TCCCTGAG------CTG------TTTGAAGT---CATATGTGGCGTGTA--------GACAAGGGGA---------------------------------- | ||
| ******** * ** **** * * * ** * ** * * | |||
| cbriggsae | .(((((((((((.(((((.((((((((((...((((.(((((.( (.((..... .)).)).)))))))))...)))))))))).)))) )...))))).........)))))) | 0.990 -45.00 | |
| cremanei | (((..(((..((((((.......(((((.((((.((((.((((((.((((((.(((((((..((.......)).))))))))))))).)))))).)))).))))..)))))........)))))).....)))..))) | 0.984 -48.16 | |
| celegans | .(((((.((.......((((((..(((..((((((.(((.((..((((.((((( ((.((....)).) ))))))))))..)).))).))))))..))) ))))))..))))))). | 0.996 -41.00 | |
| cbrenneri | (((((... .(( ((((..(( ((....))))...)) )))).))))) | 1.000 -14.50 |
| cbriggsae | chromosome:chrX:16201673:16201783:1 | {Repeats: no} |
| cremanei | chromosome:chrUn:90989797:90989934:1 | intergenic |
| celegans | chromosome:chrX:8154010:8154122:1 | intergenic ## {MIR: cel-mir-237} |
| cbrenneri | chromosome:chrUn:103710003:103710153:-1 | intergenic |
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