cel-mir-258
block8115 (miRBase cel-mir-258-2) [miRNAknown]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase cel-mir-258-2 | 0.099 | no | no | 0.38/0.38 | 21/21/1.00 | nd | nd | 0 | 0 | 0 | 0 | 5 | 20 | 5arm | 2 | nd | 0.19 | 2 | 0 | 0 | na | na |
| reads | miRBase family seed | |
| seed | ------GUUUUGA----------------------------------------------------------------------------------- | 0 | novel |
| len | cloning frequencies | |
| cel-miR-258 | -----GGTTTTGAGAGGAATCCTTTT---------------------------------------------------------------------- | 21 |
| celegans | gcaatGGTTTTGAGAGGAATCCTTTTacatatttgttgaagttttcgctcgaatttgtggtcgaatactgtagaaggaagcctgcacgaagttttg | |
| ************************************************************************************************ | ||
| celegans | .......(((((.((((..((((((((((((((((.....(..(((....)))..).....)))))).))))))))))..))).).)))))..... | 1.000 -24.60 |
| celegans | chromosome:X:227953:228048:1 | intergenic ## {MIR: cel-mir-258-2} |
block8116 (miRBase cel-mir-258-1) [miRNAknown]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase cel-mir-258-1 | 0.099 | no | no | 0.38/0.38 | 21/21/1.00 | nd | nd | 0 | 0 | 0 | 0 | 5 | 20 | 5arm | 2 | nd | 0.19 | 2 | 0 | 0 | na | na |
| reads | miRBase family seed | |
| seed | ------GUUUUGA----------------------------------------------------------------------------------- | 0 | novel |
| len | cloning frequencies | |
| cel-miR-258 | -----GGTTTTGAGAGGAATCCTTTT---------------------------------------------------------------------- | 21 |
| celegans | gcaatGGTTTTGAGAGGAATCCTTTTacatatttgttgaagttttcgctcgaatttgtggtcgaatactgtagaaggaagcctgcacgaagttttg | |
| ************************************************************************************************ | ||
| celegans | .......(((((.((((..((((((((((((((((.....(..(((....)))..).....)))))).))))))))))..))).).)))))..... | 1.000 -24.60 |
| celegans | chromosome:X:237369:237464:1 | intergenic ## {MIR: cel-mir-258-1} |
©2008 InteRNA Genomics B.V.