logoC.elegans small RNAs


miR expression

cel-mir-264

cel-mir-264

block8214 (miRBase cel-mir-264) [miRNAknown]

Hairpin parameters
miRNArandfoldRNArepGC min/maxlen min/max/mir_range5'var3'varreadsreads editedlibslibs editedbase distanceloop distancepositionlocationsexon distanceunpairedmax bulgetotal readstotal libsdicerdrosha
miRBase cel-mir-2640.278nono0.55/0.5520/20/1.00nd
nd
0
0
0
0
14
11
3arm
1
nd
0.25
3
00nana
block8214 hairpin
  readsmiRBase family seed
seed------------------------------------------------------------GCGGGUG--------------------------0novel
  lencloning frequencies
   
cel-miR-264-----------------------------------------------------------GGCGGGTGGTTGTTGTTATG--------------20
celeganstggcggcggtcgacatgtacatatcaccagtctggcttttcccgtttccgcgagcaagcGGCGGGTGGTTGTTGTTATGggataccggagcca 
 ********************************************************************************************* 
celegans.(((..((((...((((.(((.((((((.(((..(((((((.((....)).))).))))))).))))))...)))))))....))))..))).1.000 -32.80

celeganschromosome:X:2819248:2819340:1intergenic ## {SimpF: WRM0613cD07 1 fosmid,WRM067bH09 1 fosmid,WRM0633aD10 1 fosmid} ## {MIR: cel-mir-264}


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