cel-mir-265
block4664 (miRBase cel-mir-265) [miRNAknown_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase cel-mir-265 | 0.001 | no | no | 0.55/0.55 | 20/20/1.00 | nd | nd | 0 | 0 | 0 | 0 | 7 | 15 | 3arm | 1 | nd | 0.20 | 1 | 0 | 0 | na | na |
| reads | miRBase family seed | |
| seed | ------------------------------------------------------------GAGGGAG------------------------------------- | 0 | novel |
| len | cloning frequencies | |
| cel-miR-265 | -----------------------------------------------------------TGAGGGAGGAAGGGTGGTAT------------------------- | 20 |
| celegans | GGTTTGACTTACCCCCTCCTTCCGCTGGCCGCCGTTTTTATTATGAACTTGATGTGGTTTGAGGGAGGAAGGGTGGTATTTGAACC------------------ | |
| ppacificus | --------TTCTCCCCTCTGTTCACT-----CCTTCTTCGATCTAAA-TAGAGTAAGTGAGAGGGAGGAAGGGGGGGG--GGAATCTCTCCCTCTATCACGTGT | |
| ** ****** * * ** ** * ** * * ** * ** ** ************* ** *** * | ||
| celegans | ((((..(..((((((((((((((.(..(((((.((((.......)))).....)))))..).)))))).)))).)))).)..)))) | 1.000 -36.50 |
| ppacificus | (((((((((((.(((.(( (((((((...(((... .)))......)))))))))))).))))))) )))).................... | 0.990 -37.30 |
| celegans | chromosome:IV:12740413:12740498:-1 | intergenic ## {SimpF: WRM069bD03 -1 fosmid,WRM0639bE02 -1 fosmid,WRM061aB09 -1 fosmid,WRM0635bD10 -1 fosmid,WRM0630bD03 -1 fosmid,WRM0620dB12 -1 fosmid,WRM067bF06 -1 fosmid,WRM0627aC07 -1 fosmid} ## {MIR: cel-mir-265} |
| ppacificus | chromosome:chrUn:123644390:123644477:1 | Opposite_strand|Intronic_coding|NM_060423 ## Same_strand|Intronic_coding|NM_028821 |
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