miR-Intess: cel-mir-784

cel-mir-784

Hairpin parameters
miRNA	randfold	RNA	rep	GC min/max	len min/max/mir_range	5'var	3'var	reads	reads edited	libs	libs edited	base distance	loop distance	position	locations	exon distance	unpaired	max bulge	total reads	total libs	dicer	drosha
miRBase cel-mir-784	0.005	no	no	0.50/0.50	22/22/1.00	nd	nd	0	0	0	0	13	5	5arm	1	nd	0.23	2	0	0	na	na

		reads	miRBase family seed
seed	-----------------------------GGCACAA---------------------------------------------------------------------------------------	0	miR-784
		len	cloning frequencies

cel-miR-784	----------------------------TGGCACAATCTGCGTACGTAGA-------------------------------------------------------------------------	22
celegans	---------------TTCGACGTCCACGTGGCACAATCTGCGTACGTAGAAAGATCAAAAAGTCACTTCTATGTA---CAAA--TGTTGCGCTGCCTGGCACAGTGAA---------------
cremanei	----------------------------TGGCACAATCTC---------AAAGTTTGGCGTTTTCAACTGAAAAAGGCAAAACTTATTATACTTTTGAGCGG---------------------
cbriggsae	--------------TTTGTACTACCAAGTGGCACAATACCTGTATGTAGATAGTGAAGTAATATTGTTCTACATA---CACC--TATTGAGCCACCTGGTGGATTCGCAAAACTCTTTGATG-
cjaponica	GCTATGTTCTGATCTTCCCTCTGCCAGAAGGCACAATTTGTGTACGTAGAAAATATTGCTATTACGGTTTCTCTACGCCATA--TTTTGTGCCATCTGGCTTTGTGGAAATGTTCATTTTTGC
	******** * * * * * ** * *
celegans	.(((..(((((.(..((.((((.(..((((((((((.(((......)))..))))))))) )..) .)))).))..).))).))..))).	1.000 -28.70
cremanei	..((.(((.... .((((((.((.(((((....)))))..)).)))))).........))).))..	0.960 -11.14
cbriggsae	(((((.((((((.(((((.(((((..(((((((((((((((......)))))).))))))) )).. ))))).))))).))))))....)))))...........	0.828 -38.90
cjaponica	.........(((..((((....((((((.(((((((..((((..((((((....((((......))))...)))))).)))) ..))))))).)))))).....))))....))).......	0.938 -39.00

celegans	chromosome:X:8074864:8074951:-1	intergenic ## {SimpF: WRM0615dD08 -1 fosmid,WRM0635cH06 -1 fosmid,WRM061cG12 -1 fosmid,WRM0629dB04 -1 fosmid,WRM065bG01 -1 fosmid,WRM0620aB08 -1 fosmid} ## {MIR: cel-mir-784}
cremanei	chromosome:chrUn:111585136:111585263:-1	intergenic
cbriggsae	chromosome:chrX:13820017:13820119:-1	Same_strand\|Intronic_coding\|NM_003107 ## {MIR: cbr-mir-784}
cjaponica	chromosome:chrUn:16681627:16681747:1	intergenic