cel-mir-791
| absolute | CE1 |
| cel-mir-791 5arm | 14 |
| cel-mir-791 3arm | 2 |
| normalized | CE1 |
| cel-mir-791 5arm | 0.010 |
| cel-mir-791 3arm | 0.001 |
sblock74 (miRBase cel-mir-791) [miRNAknown_cloningOK_multiarm_DicerOK_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| miRBase cel-mir-791 | 0.001 | no | no | 0.42/0.55 | 20/24/1.00 | 0.0 0.0 | 0.0 0.0 | 9 2 | 0 0 | 1 1 | 0 0 | 12 11 | 6 7 | 5arm 3arm | 1 1 | nd nd | 0.13 0.22 | 2 2 | 16 | 1 | 2 | 1 |
| Member of family miR-790/791 (seed UUGGCAC): cel-mir-791, cel-mir-790 |
| reads | miRBase family seed | ||
| seed | ----------------CCUUAUC----------------------------------------------------------------------------------- | 12 | novel |
| seed | ---------------ACCUUAU------------------------------------------------------------------------------------ | 2 | novel |
| seed | ---------------------------------------------------------UUGGCAC------------------------------------------ | 2 | miR-790/791 |
| len | cloning frequencies | ||
| CE1 | |||
| ---------------ACCTTATCCGTTGTAGCCAAAGT-------------------------------------------------------------------- | 23 | 9 | |
| --------------------------------------------------------TTTGGCAC-TCCGCAGATAAGGC--------------------------- | 22 | 2 | |
| --------------TACCTTATCCGTTGTAGCCAAAGT-------------------------------------------------------------------- | 24 | 2 | |
| ---------------ACCTTATCCGTTGTAGCCAA----------------------------------------------------------------------- | 20 | 1 | |
| ---------------ACCTTATCCGTTGTAGCCAAAGTT------------------------------------------------------------------- | 24 | 1 | |
| ---------------ACCTTATCCGTTGTAGCCAAAG--------------------------------------------------------------------- | 22 | 1 | |
| cel-miR-791 | --------------------------------------------------------TTTGGCAC-TCCGCAGATAAGGCA-------------------------- | 23 | - |
| celegans | ---GAACCTTCGATTACCTTATCCGTTGTAGCCAAAGTTCAACGAAGC--GGCAACTTTGGCAC-TCCGCAGATAAGGCAATCGATTGT----------TT----- | ||
| cbrenneri | CTACAATTCTCAGTTACCTTATCACGTGTTGCTAAAGTTCAATACATTTAGTGAACTTTGGCAC-AACGCTGATTAGGTGACTGATTAT----------TTTGTAG | ||
| ppacificus | ---------------ACCTTATC------------------------------GGCTTTGTCGCATTCACCGATGACGTCAGTAATTACGACGATCTCATTAAGGT | ||
| ******** ***** * * * * *** * * * *** ** | |||
| celegans | ((((..((((((.(((((((((..((.(((((((((...((...) )..))))))))))) ..))..))))))).))))))..)) )) | 1.000 -32.70 | |
| cbrenneri | ((((((...((((((((((.(((((((..((((((((((((.((....)).)))))))))))). .))).)))).)))))))))).... .)))))) | 1.000 -42.00 | |
| ppacificus | ((((((.. ((..((((((.....((.(((...))).)).....))))))..))..)))))) | 0.826 -14.00 |
| celegans | chromosome:X:5809309:5809393:1 | intergenic ## {SimpF: WRM064cC12 1 fosmid,WRM0626cF01 1 fosmid,WRM0618aE12 1 fosmid,WRM067cH03 1 fosmid,WRM063cG10 1 fosmid,WRM065bC09 1 fosmid,WRM0633bF12 1 fosmid,WRM0637bH01 1 fosmid,WRM0627bH09 1 fosmid,WRM068aC04 1 fosmid,WRM0640cA03 1 fosmid} ## {MIR: cel-mir-791} |
| cbrenneri | chromosome:chrUn:4065011:4065105:1 | intergenic |
| ppacificus | chromosome:chrUn:5248391:5248515:-1 | intergenic |
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