seed | --CUCGGUC---------------------------------------------------------------- | 6 | novel |
| | | AF16 |
| -ACTCGGTC-CGGAGTCAATGGG-------------------------------------------------- | 21 | 4 |
| -ACTCGGTC-CGGAGTCAATGGGT--T---------------------------------------------- | 23 | 1 |
| -ACTCGGTC-CGGAGTCAATGGGT------------------------------------------------- | 22 | 1 |
cbriggsae | CACTCGGTC-CGGAGTCAATGGGT--TATC--ATTCTCAA-CCTTCCCATTGGCACCAACTTGACCGTTGTGT | |
cremanei | -ACTCGGTCGTGGAACTCGAGACTACTATCTGAATACCA--CTTTGTTCTCG--AGTCATATGACTGCTT--- | |
cjaponica | -ACTCGGTC-CGACGTCGGTGGGT--TATCTGATTCTGAACCCCTCCCATCGGCACCAACTTGACCGTTGT-- | |
| ******** * * * **** * * * * * * * * * **** * * | |
| -------------- -------------- ---- -------- ------------------------------------- | NM_117511 |
| ++++++++++++++ ++++++++++++++ ++++ ++++++++ +++++++++++++++++++++++++++++++++++++ | NM_001030661 |
| ++++++++++++++ ++++++++++++++ ++++ ++++++++ +++++++++++++++++++++++++++++++++++++ | NM_066606 |
| ++++++++++++++ ++++++++++++++ ++++ ++++++++ +++++++++++++++++++++++++++++++++++++ | NM_200908 |
cbriggsae | (((.((((( .((.(((((((((. .... ........ ....))))))))).)).....)))))..))). | 1.000 -24.13 |
cremanei | ...((((((((..((((((((..((....((.....)) ....))))))) )))..))))))))... | 0.999 -21.40 |
cjaponica | ...((((( ....(((((((((. ..((.......))......)))))))))........))))).... | 0.979 -18.90 |