block4979_cand
| absolute | AF16 |
| block4979_cand 3arm | 0.500 |
| normalized | AF16 |
| block4979_cand 3arm | 0.001 |
block4979 [novel_randfoldOK]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.001 | no | no | 0.43/0.43 | 23/23/1.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 9 | 7 | 3arm | 2 | nd | 0.17 | 2 | 1 | 1 | na | na |
| Member of family novel1 (seed AACCCAA): block4517_cand, block4979_cand |
| reads | miRBase family seed | ||
| seed | -------------------------------------------------AACCCAA------------------------ | 1 | novel |
| len | cloning frequencies | ||
| AF16 | |||
| ------------------------------------------------TAACCCAATCACGAAAATGGCTG--------- | 23 | 1 | |
| cbriggsae | agttcctttcagccacttcggttgtggttatacaaacagaagttgataTAACCCAATCACGAAAATGGCTGatggtgatg | ||
| ******************************************************************************** | |||
| ------------------------------------------------------------------------------------------ | NM_027552 | ||
| ------------------------------------------------------------------------------------------ | NM_001019667 | ||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_011438 | ||
| cbriggsae | .((..((.(((((((.((((((((.(((((((..(((....)))..)))))))))))..))))..))))))).))..)). | 1.000 -28.70 |
| cbriggsae | chromosome:chrX:10977022:10977101:1 | Opposite_strand|Intronic_non-coding|NM_027552|Kynu ## Opposite_strand|Intronic_coding|NM_001019667|SPAC17A2.10c ## Same_strand|Intronic_non-coding|NM_011438|Sox12 ## {Repeats: no} |
©2008 InteRNA Genomics B.V.