seed | -----ACCGCCC----------------------------------------------- | 1 | novel |
| | | AF16 |
| ----CACCGCCCGGTCGCTAAT------------------------------------- | 18 | 1 |
cbriggsae | ccatCACCGCCCGGTCGCTAATtattatgcttccggtatctggtggcccacggagtgga | |
| *********************************************************** | |
| --------------------------------------------------------------------- | NM_026450 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_175692 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001037394 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_104594 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_031795 |
| --------------------------------------------------------------------- | NM_115574 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001124041 |
cbriggsae | ......((((((((((((((..((((........))))..))))))))...)).)))). | 0.800 -19.10 |
seed | ---CAACGAC------------------------------------------------------------ | 1 | novel |
| | | AF16 |
| --GCAACGACGATTGAGAGACCAAATATT----------------------------------------- | 27 | 1 |
cbriggsae | aaGCAACGACGATTGAGAGACCAAATATTgcggtcaacgcaaatctggagattttagtttttattccttt | |
| ********************************************************************** | |
| -------------------------------------------------------------------------------- | NM_026450 |
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001093227 |
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001024290 |
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_175692 |
| -------------------------------------------------------------------------------- | NM_001087652 |
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001071291 |
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001078787 |
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001109774 |
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001114303 |
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001114304 |
| -------------------------------------------------------------------------------- | NM_001089360 |
| -------------------------------------------------------------------------------- | NM_059581 |
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_121223 |
| -------------------------------------------------------------------------------- | NM_115574 |
| -------------------------------------------------------------------------------- | NM_021399 |
| -------------------------------------------------------------------------------- | NM_001079883 |
| -------------------------------------------------------------------------------- | NM_001853 |
| -------------------------------------------------------------------------------- | NM_000393 |
cbriggsae | (((.((.((.((((((((..(((.((.(((((.....))))))).)))...)))))))).)).)).))). | 1.000 -13.40 |
seed | ---------------------------------------------------------------------------------------------GCUGCUA------------ | 1 | novel |
| | | AF16 |
| --------------------------------------------------------------------------------------------TGCTGCTAATTTGGTTTC-- | 18 | 1 |
cbriggsae | ttgaaaaaataaacacggaagacactcgtaaataccaaaaaggttctctgtttcaactcctaattatcatcaagccttttttaatttatcacTGCTGCTAATTTGGTTTCaa | |
| **************************************************************************************************************** | |
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001032899 |
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001107961 |
cbriggsae | .(((((...((((...((.((.((...((((((...(((((((((...((.................))...)))))))))..))))))...)))).))..)))).))))). | 0.930 -12.53 |
seed | --AUUACGG------------------------------------------------------------------------------------ | 2 | novel |
| | | AF16 |
| -GATTACGGATTGCAACCATTTACAC------------------------------------------------------------------- | 25 | 2 |
cbriggsae | cGATTACGGATTGCAACCATTTACACtgcaaattttgtagtctttgtagtctttgtagtttttgtagtttttgtagactttgcagtcagaatt | |
| ********************************************************************************************* | |
| ------------------------------------------------------------------------------------------------------- | NM_012655 |
| ------------------------------------------------------------------------------------------------------- | NM_001012534 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_075505 |
| ------------------------------------------------------------------------------------------------------- | NM_013672 |
| <<<<<<<<<<<<<<<<<<<<<<<<............................................................................... | NM_074173 |
cbriggsae | .((((...((((((((...(((((((((((((..(((.((.((....)).))...)))..))))))))....)))))..))))))))..)))) | 0.970 -22.20 |
seed | ---AAUUGAC--------------------------------------------------------------------------------- | 1 | novel |
| | | AF16 |
| --CAATTGACACTGAAGAAC----------------------------------------------------------------------- | 18 | 1 |
cbriggsae | tcCAATTGACACTGAAGAACtgagtgactacgtcttcggcgtccactcgcctcttgtagtactgttctgcgtcacgtcttatagctttggg | |
| ******************************************************************************************* | |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_030641 |
| ----------------------------------------------------------------------------------------------------- | NM_075282 |
| ----------------------------------------------------------------------------------------------------- | NM_062337 |
| ----------------------------------------------------------------------------------------------------- | NM_011780 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_008746 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001044559 |
| ----------------------------------------------------------------------------------------------------- | NM_060557 |
| ----------------------------------------------------------------------------------------------------- | NM_008026 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_075282 |
| ----------------------------------------------------------------------------------------------------- | NM_067080 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_071121 |
cbriggsae | .((((.(((.((((((((((..(((.((((((.....((((......))))...))))))))))))))...))).)).))).....)))). | 0.500 -22.30 |
seed | -GCCGGGG---------------------------------------------------------------------------- | 1 | novel |
| | | AF16 |
| TGCCGGGGATGAGCAATTG----------------------------------------------------------------- | 19 | 1 |
cbriggsae | TGCCGGGGATGAGCAATTGagcatatcactgactgttggtgaggtgactacatttctgaggcttttgtaatttcattatttggt | |
| ************************************************************************************ | |
| ---------------------------------------------------------------------------------------------- | NM_001087019 |
| ---------------------------------------------------------------------------------------------- | NM_001018915 |
| ---------------------------------------------------------------------------------------------- | NM_001854 |
| ---------------------------------------------------------------------------------------------- | NM_131292 |
| ---------------------------------------------------------------------------------------------- | NM_183186 |
| ---------------------------------------------------------------------------------------------- | NM_080629 |
| ---------------------------------------------------------------------------------------------- | NM_032085 |
| ---------------------------------------------------------------------------------------------- | NM_001113224 |
| ---------------------------------------------------------------------------------------------- | NM_080630 |
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001123511 |
| ---------------------------------------------------------------------------------------------- | NM_001001135 |
cbriggsae | .(((((((((((((((..((((...(((..((.....((((((....)).))))))))).))))))))....))))).)))))) | 0.640 -17.30 |
seed | ---AUGAAAC------------------------------------------------- | 1 | novel |
| | | AF16 |
| --AATGAAACCGAGGGATCTG-------------------------------------- | 19 | 1 |
cbriggsae | aaAATGAAACCGAGGGATCTGgctcaacactttctgacttggattccaacgtttctttt | |
| *********************************************************** | |
| --------------------------------------------------------------------- | NM_001011629 |
| --------------------------------------------------------------------- | NM_172925 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_065286 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001093260 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_009573 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_130279 |
cbriggsae | .....(((((...(((((((((.(((........))).)))))))))...))))).... | 1.000 -15.20 |
seed | --------------------------------------------------UUUUUCU-------------------- | 1 | novel |
| | | AF16 |
| -------------------------------------------------GTTTTTCTGGCTTTAGCCTTTGAGG--- | 25 | 1 |
cbriggsae | tggctcacggggttttttggtttcagtaaatagaggaacatttttcttcGTTTTTCTGGCTTTAGCCTTTGAGGcgc | |
| ***************************************************************************** | |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_184109 |
| --------------------------------------------------------------------------------------- | NM_013720 |
| --------------------------------------------------------------------------------------- | NM_001085471 |
| --------------------------------------------------------------------------------------- | NM_204577 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_061965 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_075282 |
| --------------------------------------------------------------------------------------- | NM_005197 |
| --------------------------------------------------------------------------------------- | NM_001107146 |
| --------------------------------------------------------------------------------------- | NM_001022613 |
| --------------------------------------------------------------------------------------- | NM_067668 |
| --------------------------------------------------------------------------------------- | NM_001054815 |
| --------------------------------------------------------------------------------------- | NM_001013538 |
| --------------------------------------------------------------------------------------- | NM_028128 |
| --------------------------------------------------------------------------------------- | NM_067174 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_008425 |
| --------------------------------------------------------------------------------------- | NM_000690 |
cbriggsae | ((.((((.((((((....(((..(((.(((..((((((.....))))))...)))))))))..)))))))))).)). | 1.000 -20.60 |
seed | -----------------------------------------------------------------------------CGCAGAU----------------------- | 1 | novel |
| | | AF16 |
| ----------------------------------------------------------------------------GCGCAGATGGCGCTGTGGTTAGCGTTTT--- | 28 | 1 |
cbriggsae | tactaaaattttgaaaaacgttcccatcctctcccccgcgcgattggctactacctcgcactcctagtccccagttGCGCAGATGGCGCTGTGGTTAGCGTTTTagt | |
| *********************************************************************************************************** | |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_013720 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001107146 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001054815 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001013538 |
| --------------------------------------------------------------------------------------------------------------------- | NM_070558 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_028128 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_075459 |
cbriggsae | .((((((((.((((...(((...(((((.........((((((((((..((((...........))))..)))))))))).)))))...)))..)))).)))))))) | 0.900 -30.30 |
seed | -------------------------------AACGGAU----------------- | 1 | novel |
| | | AF16 |
| ------------------------------GAACGGATGGCTTGAGTCAATGTTG | 25 | 1 |
cbriggsae | caactgataggcaccaatgtgtttgtaaacGAACGGATGGCTTGAGTCAATGTTG | |
| ******************************************************* | |
| ----------------------------------------------------------------- | NM_125682 |
| ----------------------------------------------------------------- | NM_112886 |
| ----------------------------------------------------------------- | NM_020066 |
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_016802 |
cbriggsae | ((((((((((((....((.((((((....)))))).)).))))..))))..)))) | 0.980 -13.30 |