other hairpins
novel_Multihit_nonpairedHIGH (9 loci)
novel_lenNOK_bulgeHIGH (8 loci)
block1587 [novel_lenNOK_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.092 | no | no | 0.44/0.44 | 18/18/0.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 20 | 9 | 5arm | 1 | nd | 0.28 | 5 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ---------------------CCAUUCA---------------------------------------------------------------------------- | 1 | novel |
| len | cloning frequencies | ||
| AF16 | |||
| --------------------TCCATTCAGTTTTGCCAC------------------------------------------------------------------ | 18 | 1 | |
| cbriggsae | ttttgaaaaatgaaaattggTCCATTCAGTTTTGCCACaaattcaaagaagtttgagaaccttccagaactttccaggaatggataacttttagagatttaaaa | ||
| ******************************************************************************************************** | |||
| ------------------------------------------------------------------------------------------------------------------ | NM_001102902 | ||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001077612 | ||
| ------------------------------------------------------------------------------------------------------------------ | NM_065190 | ||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001129219 | ||
| cbriggsae | .((((((...(((((....(((((((((((((((.......((((((....)))))).......)))))))......))))))))...)))))....)))))). | 0.790 -19.44 |
| cbriggsae | chromosome:chrIII:174248:174351:1 | Opposite_strand|Intronic_non-coding|NM_001102902|LOC100124966 ## Same_strand|Intronic_coding|NM_001077612|zgc:153009 ## Same_strand|Intronic_non-coding|NM_001129219|nhr-121 ## {Repeats: no} |
block1668 [novel_lenNOK_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.422 | no | no | 0.30/0.33 | 18/20/0.50 | 0.0 | 1.0 | 2 | 0 | 1 | 0 | 21 | 0 | 3arm | 1 | nd | 0.30 | 4 | 2 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | -------------------------------------------------------UUAUGAA--------------------------------- | 2 | novel |
| len | cloning frequencies | ||
| AF16 | |||
| ------------------------------------------------------GTTATGAATACCGTCAAA----------------------- | 18 | 1 | |
| ------------------------------------------------------GTTATGAATACCGTCAAATT--------------------- | 20 | 1 | |
| cbriggsae | gcttccgcgtttcattttttccgatgcatgatgcatttgtcctaatgataccaaGTTATGAATACCGTCAAATTggggaatggaggaatggatgg | ||
| *********************************************************************************************** | |||
| --------------------------------------------------------------------------------------------------------- | NM_001016781 | ||
| --------------------------------------------------------------------------------------------------------- | NM_001005609 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001043354 | ||
| --------------------------------------------------------------------------------------------------------- | NM_111431 | ||
| --------------------------------------------------------------------------------------------------------- | NM_001399 | ||
| --------------------------------------------------------------------------------------------------------- | NM_212504 | ||
| --------------------------------------------------------------------------------------------------------- | NM_007473 | ||
| --------------------------------------------------------------------------------------------------------- | NM_136816 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001098634 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_019027 | ||
| --------------------------------------------------------------------------------------------------------- | NM_131262 | ||
| --------------------------------------------------------------------------------------------------------- | NM_001014761 | ||
| cbriggsae | ...((((..((((...((..(((((...(((((......((.((((........)))).))....))))).)))))..))..))))..))))... | 0.650 -21.20 |
| cbriggsae | chromosome:chrIII:3886316:3886410:1 | Opposite_strand|Intronic_non-coding|NM_001016781|LOC549535 ## Opposite_strand|Intronic_coding|NM_001005609|EDA ## Same_strand|Intronic_non-coding|NM_001043354|Rorb ## {Repeats: no} |
block2440 [novel_lenNOK_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.433 | no | no | 0.58/0.58 | 19/19/0.00 | 0.0 | 0.0 | 2 | 0 | 1 | 0 | 15 | 3 | 3arm | 1 | nd | 0.26 | 4 | 2 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ---------------------------------------------------GGUGCCG-------------------------- | 2 | novel |
| len | cloning frequencies | ||
| AF16 | |||
| --------------------------------------------------TGGTGCCGTTACTGGATGG--------------- | 19 | 2 | |
| cbriggsae | tttgctgtttcagacttttcagatcatttagggcatattttgaacttcaaTGGTGCCGTTACTGGATGGagctttacaccaagc | ||
| ************************************************************************************ | |||
| ---------------------------------------------------------------------------------------------- | NM_070351 | ||
| ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_182271 | ||
| cbriggsae | ((((.(((...((.(((.......((((((((((((...(((.....)))..)))))....))))))))))))..))).)))). | 0.540 -16.11 |
| cbriggsae | chromosome:chrIV:2111299:2111382:1 | Opposite_strand|Intronic_non-coding|NM_070351|LLC1.2 ## Same_strand|Intronic_coding|NM_182271|K02E7.4 ## {Repeats: no} |
block2934 [novel_lenNOK_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.484 | no | no | 0.36/0.36 | 25/25/0.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 16 | 18 | 5arm | 3 | nd | 0.28 | 4 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | -----------------UUACUAG------------------------------------------------------------------------------------------------ | 1 | novel |
| len | cloning frequencies | ||
| AF16 | |||
| ----------------TTTACTAGAGTTGATATGTCGACCT------------------------------------------------------------------------------- | 25 | 1 | |
| cbriggsae | catactaaaaatcactTTTACTAGAGTTGATATGTCGACCTttgtgataactgtttttattattatattagaaaattatatattgcatatttattttaggaaaattaaaatttgaagtgt | ||
| ************************************************************************************************************************ | |||
| cbriggsae | .(((((..((((...((((.(((((((.((((((.(((....((((((.....((((((.........))))))))))))..))))))))).))))))).)))).....))))..))))) | 0.590 -16.20 |
| cbriggsae | chromosome:chrM:3242:3361:-1 | {Repeats: no} |
block3105 [novel_lenNOK_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.484 | no | no | 0.36/0.36 | 25/25/0.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 16 | 18 | 5arm | 3 | nd | 0.28 | 4 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | -----------------UUACUAG------------------------------------------------------------------------------------------------ | 1 | novel |
| len | cloning frequencies | ||
| AF16 | |||
| ----------------TTTACTAGAGTTGATATGTCGACCT------------------------------------------------------------------------------- | 25 | 1 | |
| cbriggsae | catactaaaaatcactTTTACTAGAGTTGATATGTCGACCTttgtgataactgtttttattattatattagaaaattatatattgcatatttattttaggaaaattaaaatttgaagtgt | ||
| ************************************************************************************************************************ | |||
| cbriggsae | .(((((..((((...((((.(((((((.((((((.(((....((((((.....((((((.........))))))))))))..))))))))).))))))).)))).....))))..))))) | 0.590 -16.20 |
| cbriggsae | chromosome:chrUn:4217305:4217424:-1 | {Repeats: no} |
block3487 [novel_lenNOK_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.484 | no | no | 0.36/0.36 | 25/25/0.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 16 | 18 | 5arm | 3 | nd | 0.28 | 4 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | -----------------UUACUAG------------------------------------------------------------------------------------------------ | 1 | novel |
| len | cloning frequencies | ||
| AF16 | |||
| ----------------TTTACTAGAGTTGATATGTCGACCT------------------------------------------------------------------------------- | 25 | 1 | |
| cbriggsae | catactaaaaatcactTTTACTAGAGTTGATATGTCGACCTttgtgataactgtttttattattatattagaaaattatatattgcatatttattttaggaaaattaaaatttgaagtgt | ||
| ************************************************************************************************************************ | |||
| cbriggsae | .(((((..((((...((((.(((((((.((((((.(((....((((((.....((((((.........))))))))))))..))))))))).))))))).)))).....))))..))))) | 0.590 -16.20 |
| cbriggsae | chromosome:chrUn:4251811:4251930:1 | {Repeats: no} |
block3937 [novel_lenNOK_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.382 | no | no | 0.17/0.17 | 18/18/0.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 29 | 3 | 5arm | 3 | nd | 0.28 | 4 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ------------------------------UUGAUUG---------------------------------------------------------------------- | 1 | novel |
| len | cloning frequencies | ||
| AF16 | |||
| -----------------------------TTTGATTGTAAGTTTTTT------------------------------------------------------------ | 18 | 1 | |
| cbriggsae | ggtttctattggttcgcacttatttcttgTTTGATTGTAAGTTTTTTtaaagattcaaagcattaattaaaactttcagataagtattttcgggtctactgtaaact | ||
| *********************************************************************************************************** | |||
| --------------------------------------------------------------------------------------------------------------------- | NM_001089210 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001103783 | ||
| ....................................................................................>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> | NM_001028806 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001015473 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001110930 | ||
| ..............................................................................>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> | NM_074025 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_026172 | ||
| cbriggsae | (((((.((..((..((.........(((((((((....(((((((.((((............))))..))))))))))))))))......))..))...)).))))) | 0.980 -14.96 |
| cbriggsae | chromosome:chrV:235674:235780:1 | Opposite_strand|Intronic_non-coding|NM_001089210|LOC398649 ## Same_strand|Intronic_coding|NM_001103783|CG34220 ## Same_strand|Intronic_non-coding|NM_001015473|scro ## {Repeats: no} |
block4007 [novel_lenNOK_bulgeHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.594 | no | no | 0.42/0.42 | 19/19/0.00 | 0.0 | 0.0 | 1 | 0 | 1 | 0 | 18 | 2 | 3arm | 1 | nd | 0.21 | 4 | 1 | 1 | na | na |
| reads | miRBase family seed | ||
| seed | ---------------------------------------------------UCAAGAC----------------------------- | 1 | novel |
| len | cloning frequencies | ||
| AF16 | |||
| --------------------------------------------------ATCAAGACTCCTCCAAATC------------------ | 19 | 1 | |
| cbriggsae | tgcagttccattttttgattttttttgggtttttttcagacagcacacgcATCAAGACTCCTCCAAATCaaaagaataaggggtggt | ||
| *************************************************************************************** | |||
| ------------------------------------------------------------------------------------------------- | NM_007590 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_021252 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001075499 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_031408 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001129754 | ||
| -------------<<<<<<<<<<<<<<<<<<<<<--------------------------------------------------------------- | NM_070985 | ||
| ------------------------------------------------------------------------------------------------- | NM_001085355 | ||
| ------------------------------------------------------------------------------------------------- | NM_001126147 | ||
| cbriggsae | .((..((((.(((((((((((.....(((((((.....((..((....)).)))))))))....)))))))))))....))))..)) | 0.580 -14.40 |
| cbriggsae | chromosome:chrV:3630497:3630583:1 | Opposite_strand|Intronic_non-coding|NM_007590|Calm3 ## Same_strand|Intronic_coding|NM_021252|RAB18 ## Same_strand|Intronic_non-coding|NM_031408|Gigyf1 ## {Repeats: no} |
novel_lenNOK_cloningHIGH_multiarm_DicerNOK_shortStem_nonpairedHIGH (7 loci)
sblock31 [novel_lenNOK_cloningHIGH_multiarm_DicerNOK_shortStem_nonpairedHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.099 | no | no | 0.36/0.64 | 18/28/0.40 | 0.0 0.8 0.3 | 0.0 0.2 0.0 | 1 8 24 | 0 0 0 | 1 1 1 | 0 0 0 | 3 15 2 | 5 -13 9 | 5arm 5arm_loop_3arm 3arm | 7 7 7 | nd nd nd | 0.35 0.36 0.45 | 3 4 6 | 48 | 1 | 4 | 3 |
| reads | miRBase family seed | ||
| seed | -------------------------------------------UCCUGGA------------- | 20 | novel |
| seed | ------------------------------------------AUCCUGG-------------- | 10 | novel |
| seed | -----------------UACUUGG--------------------------------------- | 4 | novel |
| seed | ----------------------------------GCCUGGG---------------------- | 3 | novel |
| seed | -------------------CUUGGAU------------------------------------- | 2 | novel |
| seed | ----------------GUACUUG---------------------------------------- | 2 | novel |
| seed | ------------------ACUUGGA-------------------------------------- | 2 | novel |
| seed | -----------------------------------------AAUCCUG--------------- | 1 | novel |
| seed | ----------------------------------------GAAUCCU---------------- | 1 | novel |
| seed | -------------------------------------UGGGAAU------------------- | 1 | novel |
| seed | ----UGAGUCC---------------------------------------------------- | 1 | novel |
| seed | ------------------------------------CUGGGAA-------------------- | 1 | novel |
| len | cloning frequencies | ||
| AF16 | |||
| ------------------------------------------ATCCTGGATGTTGTAAGCT-- | 19 | 17 | |
| -----------------------------------------AATCCTGGATGTTGTAAGCT-- | 20 | 7 | |
| ----------------GTACTTGGATCGGAGACGGCCTGGG---------------------- | 25 | 4 | |
| ---------------------------------GGCCTGGGAATCCTGGATGTTGTAAGCT-- | 28 | 3 | |
| ------------------------------------------ATCCTGGATGTTGTAAGCTT- | 20 | 2 | |
| ------------------ACTTGGATCGGAGACGGCCTGG----------------------- | 22 | 2 | |
| ---------------AGTACTTGGATCGGAGACGGCCTGGG---------------------- | 26 | 2 | |
| -----------------------------------CCTGGGAATCCTGGATGTTGTAAGCT-- | 26 | 1 | |
| -----------------------------------------AATCCTGGATGTTGTAAG---- | 18 | 1 | |
| ----------------------------------------GAATCCTGGATGTTGTAAGCT-- | 21 | 1 | |
| -----------------------------------------AATCCTGGATGTTGTAAGCTT- | 21 | 1 | |
| ---TTGAGTCCAGTTAGTACTTG---------------------------------------- | 20 | 1 | |
| ---------------------------------------GGAATCCTGGATGTTGTAAGCT-- | 22 | 1 | |
| -----------------TACTTGGATCGGAGACGGCCTGG----------------------- | 23 | 1 | |
| -----------------------------------------AATCCTGGATGTTGTAAGCTTT | 22 | 1 | |
| ------------------------------------------ATCCTGGATGTTGTAAGCTTT | 21 | 1 | |
| -----------------TACTTGGATCGGAGACGGCCTG------------------------ | 22 | 1 | |
| ------------------------------------CTGGGAATCCTGGATGTTGTAAGCT-- | 25 | 1 | |
| cbriggsae | acgttgagtccagttagtacttggatcggagacggcctgggAATCCTGGATGTTGTAAGCTtt | ||
| *************************************************************** | |||
| ------------------------------------------------------------------------- | NM_001092591 | ||
| ------------------------------------------------------------------------- | NM_177186 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001030661 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001027534 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001027535 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_066897 | ||
| <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<.................................... | NM_170601 | ||
| cbriggsae | (((....((((((...((.(((((..((....))..))))).)).))))))..)))....... | 0.990 -17.60 |
| cbriggsae | chromosome:chrIII:8639710:8639772:-1 | Opposite_strand|Intronic_non-coding|NM_001092591|MGC81879 ## Same_strand|Intronic_non-coding|NM_001030661|SETD1B ## Opposite_strand|Boundary_non-coding|NM_170601|SIAE ## Opposite_strand|Exonic_non-coding|NM_170601|SIAE ## {Repeats: no} |
sblock32 [novel_lenNOK_cloningHIGH_multiarm_DicerNOK_shortStem_nonpairedHIGH]
| miRNA | randfold | RNA | rep | GC min/max | len min/max/mir_range | 5'var | 3'var | reads | reads edited | libs | libs edited | base distance | loop distance | position | locations | exon distance | unpaired | max bulge | total reads | total libs | dicer | drosha |
| no | 0.099 | no | no | 0.36/0.64 | 18/28/0.40 | 0.0 0.8 0.3 | 0.0 0.2 0.0 | 1 8 24 | 0 0 0 | 1 1 1 | 0 0 0 | 3 15 2 | 5 -13 9 | 5arm 5arm_loop_3arm 3arm | 7 7 7 | nd nd nd | 0.35 0.36 0.45 | 3 4 6 | 48 | 1 | 4 | 3 |
| reads | miRBase family seed | ||
| seed | -------------------------------------------UCCUGGA------------- | 20 | novel |
| seed | ------------------------------------------AUCCUGG-------------- | 10 | novel |
| seed | -----------------UACUUGG--------------------------------------- | 4 | novel |
| seed | ----------------------------------GCCUGGG---------------------- | 3 | novel |
| seed | -------------------CUUGGAU------------------------------------- | 2 | novel |
| seed | ----------------GUACUUG---------------------------------------- | 2 | novel |
| seed | ------------------ACUUGGA-------------------------------------- | 2 | novel |
| seed | -----------------------------------------AAUCCUG--------------- | 1 | novel |
| seed | ----------------------------------------GAAUCCU---------------- | 1 | novel |
| seed | -------------------------------------UGGGAAU------------------- | 1 | novel |
| seed | ----UGAGUCC---------------------------------------------------- | 1 | novel |
| seed | ------------------------------------CUGGGAA-------------------- | 1 | novel |
| len | cloning frequencies | ||
| AF16 | |||
| ------------------------------------------ATCCTGGATGTTGTAAGCT-- | 19 | 17 | |
| -----------------------------------------AATCCTGGATGTTGTAAGCT-- | 20 | 7 | |
| ----------------GTACTTGGATCGGAGACGGCCTGGG---------------------- | 25 | 4 | |
| ---------------------------------GGCCTGGGAATCCTGGATGTTGTAAGCT-- | 28 | 3 | |
| ------------------------------------------ATCCTGGATGTTGTAAGCTT- | 20 | 2 | |
| ------------------ACTTGGATCGGAGACGGCCTGG----------------------- | 22 | 2 | |
| ---------------AGTACTTGGATCGGAGACGGCCTGGG---------------------- | 26 | 2 | |
| -----------------------------------CCTGGGAATCCTGGATGTTGTAAGCT-- | 26 | 1 | |
| -----------------------------------------AATCCTGGATGTTGTAAG---- | 18 | 1 | |
| ----------------------------------------GAATCCTGGATGTTGTAAGCT-- | 21 | 1 | |
| -----------------------------------------AATCCTGGATGTTGTAAGCTT- | 21 | 1 | |
| ---TTGAGTCCAGTTAGTACTTG---------------------------------------- | 20 | 1 | |
| ---------------------------------------GGAATCCTGGATGTTGTAAGCT-- | 22 | 1 | |
| -----------------TACTTGGATCGGAGACGGCCTGG----------------------- | 23 | 1 | |
| -----------------------------------------AATCCTGGATGTTGTAAGCTTT | 22 | 1 | |
| ------------------------------------------ATCCTGGATGTTGTAAGCTTT | 21 | 1 | |
| -----------------TACTTGGATCGGAGACGGCCTG------------------------ | 22 | 1 | |
| ------------------------------------CTGGGAATCCTGGATGTTGTAAGCT-- | 25 | 1 | |
| cbriggsae | acgttgagtccagttagtacttggatcggagacggcctgggAATCCTGGATGTTGTAAGCTtt | ||
| *************************************************************** | |||
| ------------------------------------------------------------------------- | NM_001092591 | ||
| ------------------------------------------------------------------------- | NM_177186 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001030661 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001027534 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_001027535 | ||
| +++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ | NM_066897 | ||
| <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<.................................... | NM_170601 | ||
| cbriggsae | (((....((((((...((.(((((..((....))..))))).)).))))))..)))....... | 0.990 -17.60 |
| cbriggsae | chromosome:chrIII:8640646:8640708:-1 | Opposite_strand|Intronic_non-coding|NM_001092591|MGC81879 ## Same_strand|Intronic_non-coding|NM_001030661|SETD1B ## Opposite_strand|Boundary_non-coding|NM_170601|SIAE ## Opposite_strand|Exonic_non-coding|NM_170601|SIAE ## {Repeats: no} |
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